Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0795 ATGATGCCCATTTTGGACCACCACCATGATCACAATAATCAACCCCTCCTCCTCCCCGCCGATGATCTCGCCGCCGCTGTCCCCGCCCCCGCCTTCCATCGCAAGAAACGGATGCCCAGAAACCGCCGCCGCTCTTCTTCTAATCTTCCCTTCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATAACACTCCCCATCTCCCTCCTCCCCGGGTAATTGATCCAAGGAACCTGAAGTTTCTTTTCCAGAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCAGCTTTGGAGTCTAAAGAAGGAATTATAATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTCAAATATAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGGAGACTTTGTCAATGCCCATGGCTTACATCTAGGAGATTTCATCATGGTTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAAATATATTCCGACATAGCAACCAACGTCATGATCAACGACGACATTGTGTTTCAAGACTACGATGCTAGCAAAGCGGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCTGTGTCATCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCGCCTTTCGACTTTATGAGTGGATCAATGACCAACTACTCAAAAATGGGAGGCCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGACTTCTACTAA 831 45.25 MMPILDHHHDHNNQPLLLPADDLAAAVPAPAFHRKKRMPRNRRRSSSNLPFFPSSSSSSSSSNNTPHLPPPRVIDPRNLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGIIITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTGDFVNAHGLHLGDFIMVYQDCEEHNYVIQAKKACEQEIYSDIATNVMINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSKMGGLEGFGSVENLSLDDFY 276
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9076028 9079361 - CmPI595203_01g007950.1 Cmu01g0795 406301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0795 276 PANTHER B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 36 190 IPR044800 GO:0003700(InterPro)
Cmu01g0795 276 MobiDBLite consensus disorder prediction 31 73 - -
Cmu01g0795 276 Pfam B3 DNA binding domain 83 180 IPR003340 GO:0003677(InterPro)
Cmu01g0795 276 Gene3D - 79 196 IPR015300 -
Cmu01g0795 276 MobiDBLite consensus disorder prediction 44 68 - -
Cmu01g0795 276 FunFam B3 domain-containing transcription factor FUS3 79 193 - -
Cmu01g0795 276 ProSiteProfiles B3 DNA-binding domain profile. 83 185 IPR003340 GO:0003677(InterPro)
Cmu01g0795 276 SMART B3_2 83 185 IPR003340 GO:0003677(InterPro)
Cmu01g0795 276 CDD B3_DNA 81 183 IPR003340 GO:0003677(InterPro)
Cmu01g0795 276 SUPERFAMILY DNA-binding pseudobarrel domain 81 184 IPR015300 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0795 Cmu-Chr1:9076028 Cmu09g0888 Cmu-Chr9:8680861 2.20E-33 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5491 PF02362 B3 2.00E-17 CL0405 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0795 K09287 - csv:101222512 409.068