Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0823 ATGTCAAAAGAGGAGGTTATTATTTTGGACTGTTTGATCAGCCCATTTTGCAATAGGGTTAAGATTGCTTTGAATGAGAAGGGAGTGAGTTATGAGAGTAGGGAAGAGGATTTGTTTGGTTTGAAAGGTGGGAAAAGTGAGTTGTTGCTCAAATCAAACCCTATTTATAAGAAAGTGCCTGTTCTCTTGCATAATGGCAAGCCACTGAATGAAAGTTCTATTATTGTCAATTATATTGATGAGACTTGGGCATCTTCTTCCCCACTTCTTCCTTTTTCGCCCTACGAAAGAGCTCAAGCTCGGTTCTGGATTGACTACATCGATAAAAAGGTATTTGATGTGGGTTCCAAGATTTGGAAGAGCAATGGAGAAGAGCAAGAGGCAGCCAAGAAAGAGTTGATAGAGATTTTGAAGCAATTGGAGGAAGCTTTAGGTGACAAAGATTTCTTTGGAGGTGAAAGGTTTGGGATTGTGGATGTGATTGCAATCCCATTCACAAGTTGGTTCAATGCTTATGAGAAAGTTGGGAACTTCAAAGTGGAAGAACATTGCCCTAAAATCTCAGCTTGGGAAAAGAGATGTTTGCAAAAGGAGACTGTTGCAAGTGTTATCCCTTGCCCTGAGAAGATCTATAACTTTCTCACCTCCATGAGAAACAACCTTGGCCTTGAATAG 675 40.3 MSKEEVIILDCLISPFCNRVKIALNEKGVSYESREEDLFGLKGGKSELLLKSNPIYKKVPVLLHNGKPLNESSIIVNYIDETWASSSPLLPFSPYERAQARFWIDYIDKKVFDVGSKIWKSNGEEQEAAKKELIEILKQLEEALGDKDFFGGERFGIVDVIAIPFTSWFNAYEKVGNFKVEEHCPKISAWEKRCLQKETVASVIPCPEKIYNFLTSMRNNLGLE 224
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9648931 9650361 - CmPI595203_01g008230.1 Cmu01g0823 406329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0823 224 CDD GST_N_Tau 6 83 - -
Cmu01g0823 224 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 93 213 IPR010987 -
Cmu01g0823 224 FunFam Glutathione S-transferase U20 93 224 - -
Cmu01g0823 224 Gene3D Glutaredoxin 2 92 - -
Cmu01g0823 224 SFLD Main (cytGST) 2 221 - -
Cmu01g0823 224 SFLD Main.3: Omega- and Tau-like 2 221 IPR045073 -
Cmu01g0823 224 Pfam Glutathione S-transferase, C-terminal domain 119 197 IPR004046 -
Cmu01g0823 224 Gene3D - 93 224 - -
Cmu01g0823 224 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 87 IPR004045 -
Cmu01g0823 224 Coils Coil 123 146 - -
Cmu01g0823 224 SUPERFAMILY Thioredoxin-like 12 111 IPR036249 -
Cmu01g0823 224 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 215 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cmu01g0823 224 Pfam Glutathione S-transferase, N-terminal domain 11 82 IPR004045 -
Cmu01g0823 224 CDD GST_C_Tau 94 217 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cmu01g0823 224 SUPERFAMILY GST C-terminal domain-like 81 220 IPR036282 -
Cmu01g0823 224 FunFam Tau class glutathione S-transferase 1 92 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0823 Cmu-Chr1:9648931 Cmu07g1047 Cmu-Chr7:25342752 7.80E-74 dispersed
Cmu01g0823 Cmu-Chr1:9648931 Cmu05g2488 Cmu-Chr5:33746061 1.60E-31 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0823 K00799 - csv:101213628 408.297