Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0896 ATGGCCGCAAAAGATGCAGAGCAAGTCTTGGACGTGCAGTCGGTTGTCGAAGCAGTAGTTGCAAACGAAGACGCCGATGTTCCTAGCTACGAAGTAGAAAGCCTCTGCATGCGTTGCGGCGAAAACGTATTAGCTTTATTCCTGCTCTTCAACTTCTCGCAATTCTCTTCCTCACAATTACAAAATTCTGTTTCTGTTTCCGCCGCATTCAGCAGCTTAATTCGAATCTTGATTTGTGACTGCCTGGGGACAACAAGATTTTTATTAACTTTAATTCCGCACTTCAGAAAGATCTTGTTGTCAGCCTTTGAATGTCTACATTGTGGTGAGAGGAACAATGAAGTCCAGTTTGCTGGTGAGATCCAGCCACGAGGCTGTTGCTACTGTTTGGAGGTTCATGCAGGCGACCAGAAGATGCTCAATCGACAAGTGGTAAAATCTGAATCTGCCATTATTAAGATCCCAGAATTGGATTTTGAGATTCCAGCAGAGGCTCAACGTGGAACTCTATCAACTGTAACTTCTCAAAGTCCTACTTCATATTGTTTATTTGTTTTAATATTTGCTCTGTTCTCTGGCTTGTTATGTCTTATGTATCTGTGTTTGTGGAATGCTTCCTGTTTTGTAGCCTTGAGAGATTCAATGGAGACAACCTTCATCACTTCTTTGCTGCCCGCCATCATAAGAATTCTGGTGGAAGGTATATTGGTACGAGCCGCAGATGAATTAGAAGCCCTTCAAGAGGAACGTAGGAAGGTGGATCCTCAGACTGCTGAAGCAATAGACCAGTTTCTCCTGAAACTGAAAGCTTGTGCCATGGGAGATTCATCATTCTCCTTCATCTTGGATGATCCAGCTGGAAACAGCTTCATTGAGAACCCATTTGCACCAGCTAAAGATCCATCATTAAGTATCAAGTTTTATGAGCGGACTCCAGAACAACAAGCATCGTTGGGTTATTACGTTGAACCATCACAACCAGCAGAAGCTGAGGATGGAGCATCAACAGGTGGAGTTGATGCTTGTAATCAAGTTAGAGGAGAGGCACATGGATCTGTAGGAGCAACGGCTGGCCATCGGGCAATAGCTCAAAGTAACAGTGCAGAGATTGCTGAGGCCTTGTTTCGTTACACTGCACCAGAAGAAGTGATGACTTTCCCATCAACATGTGGAGCTTGTGCAGTTAGGTGTGAGACTCGAATGTTTGTAACCAAAATTCCCTACTTCCAAGAAGTGATTGTCATGGCAACTACTTGTGATGCTTGTGGTTACCGTAGTTCTGAGCTGAAGCCTGGAGGGCGAATCCCTGAAAAAGGAAAGATAATTAGTCTTTGTGTGAAGGATGTTAGAGATCTCAGTCGAGATGTGATAAAGTCAGATACTGCAAGTGTAAAAGTCCCAGATCTTGACTTGGAGCTGACTAGTGGCACTCTTGGGGGAATTGTTACAACTGTCGAAGGTTTAATCACAAAGATAAGTGAAAGTCTTGAGAGAGTACATGGATTTACTTTTGGAGACAGTCTTGATGAAAATAGAAGAAACAAATGGTTGGACTTCAAAACAAGACTAACCAAGCTCTTGAGTTTGGAACAGCCTTGGACTCTCATCCTTGATGATGCACTAGCTAATTCGTTTATTGCACCAGTGACTGATGATATGAAAGATGACCATCAGTTAACATGCGAGGAATACGAGAGATCCTGGGAACAGAATGAGGAACTTGGTTTGAACGACATGGACACTTCGGCCGCTGATGCTGCATATAATTAA 1770 43.33 MAAKDAEQVLDVQSVVEAVVANEDADVPSYEVESLCMRCGENVLALFLLFNFSQFSSSQLQNSVSVSAAFSSLIRILICDCLGTTRFLLTLIPHFRKILLSAFECLHCGERNNEVQFAGEIQPRGCCYCLEVHAGDQKMLNRQVVKSESAIIKIPELDFEIPAEAQRGTLSTVTSQSPTSYCLFVLIFALFSGLLCLMYLCLWNASCFVALRDSMETTFITSLLPAIIRILVEGILVRAADELEALQEERRKVDPQTAEAIDQFLLKLKACAMGDSSFSFILDDPAGNSFIENPFAPAKDPSLSIKFYERTPEQQASLGYYVEPSQPAEAEDGASTGGVDACNQVRGEAHGSVGATAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACAVRCETRMFVTKIPYFQEVIVMATTCDACGYRSSELKPGGRIPEKGKIISLCVKDVRDLSRDVIKSDTASVKVPDLDLELTSGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDENRRNKWLDFKTRLTKLLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAADAAYN 589
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11398629 11422176 + CmPI595203_01g008960.1 Cmu01g0896 406402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0896 589 FunFam Zinc finger protein ZPR1 434 576 - -
Cmu01g0896 589 PANTHER ZINC FINGER PROTEIN ZPR1 232 586 IPR040141 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Cmu01g0896 589 NCBIfam ZPR1 zinc finger domain 389 580 IPR004457 GO:0008270(InterPro)
Cmu01g0896 589 Gene3D ZPR1, zinc finger domain 77 119 IPR042452 -
Cmu01g0896 589 Gene3D ZPR1, zinc finger domain 378 433 IPR042452 -
Cmu01g0896 589 Gene3D ZPR1, A/B domain 230 320 IPR042451 -
Cmu01g0896 589 Gene3D ZPR1, A/B domain 434 576 IPR042451 -
Cmu01g0896 589 Gene3D ZPR1, A/B domain 120 177 IPR042451 -
Cmu01g0896 589 Pfam ZPR1 zinc-finger domain 79 123 IPR004457 GO:0008270(InterPro)
Cmu01g0896 589 Pfam ZPR1 zinc-finger domain 382 437 IPR004457 GO:0008270(InterPro)
Cmu01g0896 589 Pfam ZPR1 jelly-roll domain 451 576 - -
Cmu01g0896 589 Pfam ZPR1 jelly-roll domain 139 173 - -
Cmu01g0896 589 Pfam ZPR1 jelly-roll domain 232 320 - -
Cmu01g0896 589 FunFam Zinc finger protein ZPR1 379 433 - -
Cmu01g0896 589 SMART zpr1 78 293 IPR004457 GO:0008270(InterPro)
Cmu01g0896 589 SMART zpr1 388 548 IPR004457 GO:0008270(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0896 K06874 - gmx:100814878 726.087