Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0901 ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATATTGGAACTTACCTCGTCGAGACCCGAAGAAGGAAGAGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGCTCAACTGAGAAAGAAGTTGTGCCTGGAAAAGAGTACAAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGATTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGGAGTTTCTCTTTCAAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATGATGATAAGTTGACCATCAAAGTCGGTAATCCCAAAGAACCCAAACCGTCTGAAAATGATGATCTAAACCTCTATTTTGGTCTCTATGAGGTGTTCACTCCACCGATAAAAGCACTCAATCAAAGTAACAGGAAAAATGTATACTTCCTCACAATTGGATTTCACCAAATATTGAATTATAAAAGGGGGAAGCCTAAGGCATTGTTGAAGAGAAGGATTTTTCCATTTTAG 621 39.77 MPYDPHFRADVPVNVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEEGFAELKQVCWLEVTGSTEKEVVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIKVGNPKEPKPSENDDLNLYFGLYEVFTPPIKALNQSNRKNVYFLTIGFHQILNYKRGKPKALLKRRIFPF 206
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11492502 11497778 - CmPI595203_01g009010.1 Cmu01g0901 406407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0901 206 Pfam Phloem protein 2 18 161 IPR025886 -
Cmu01g0901 206 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 17 161 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0901 Cmu-Chr1:11492502 Cmu01g0911 Cmu-Chr1:11918949 5.40E-37 dispersed
Cmu01g0900 Cmu-Chr1:11485103 Cmu01g0901 Cmu-Chr1:11492502 1.90E-28 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0901 - - - 0.0