Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0908 ATGGTTAGAATTTTCTCTTCATCACCTCACTCCAATGGAGATCCAAACGCTATGGAAAAGGTCAAGAACCAAAAGACAATAATACATCCCAAAGGCTTCACCATCACATGGGGCAACGATAAACGCTATTGGCGCTTGTCTCGTCCATCTCGCGACAGGAAGAAGGACGCGATTGTGGCTGCAGAGTTGCTGCAAGTGTCATGGTTGGAGGTGACATGTTGGACAGACAATGTAGAGGTCGGAAAAAGCTACAAAGTTGGTTTCAACTTATCCATGACTGTGGGGGCTTTTGGATGGAAAGGGTGTGAAGTTTACATAATGGCCAAGATCGGGAAGGCTGGGAAATTCGTGTACAAAAAAGTGTCTCTCGATACAAAATGTTCCGATGATCAGAACAAGTTCGATATGCCTGAGGATGATCTCATTATCACAGTGAAACCTCCGTCGAGCTCGCCGGGCGACAGCCGTCTCTACTTGGGAATGTATGAGGTTTGGAGCGGAAGATGGAAGGGAGGACTCAAGATCCACCATGCATTTATTGAGAAAGTCGGGAACTAG 558 46.59 MVRIFSSSPHSNGDPNAMEKVKNQKTIIHPKGFTITWGNDKRYWRLSRPSRDRKKDAIVAAELLQVSWLEVTCWTDNVEVGKSYKVGFNLSMTVGAFGWKGCEVYIMAKIGKAGKFVYKKVSLDTKCSDDQNKFDMPEDDLIITVKPPSSSPGDSRLYLGMYEVWSGRWKGGLKIHHAFIEKVGN 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11756608 11757744 + CmPI595203_01g009080.1 Cmu01g0908 406414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0908 185 Pfam Phloem protein 2 25 179 IPR025886 -
Cmu01g0908 185 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 19 179 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0908 Cmu-Chr1:11756608 Cmu01g0911 Cmu-Chr1:11918949 2.10E-56 dispersed
Cmu01g0908 Cmu-Chr1:11756608 Cmu01g0910 Cmu-Chr1:11871412 5.10E-87 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0908 - - - 0.0