Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0910 ATGGTTGCTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAAAGGCAATAGAAAAGATTAAGAACCAAAAGACAATAATTTATCCCAATGGTTTCAACATCACATGGGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGAAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTCGAGGTGACATGTTCAACAGACAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGCTGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAACAAGTTCAATATGCCGGAAGATGATCTAATTATCACCGTGAACCCTCCGCCGAGCTCACCGGGAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGATGGAAGGGAGGACTCAAAATCCACCATGCATTTGTCGAGAAGGTTGGAAACTAG 552 44.93 MVAFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11871412 11872655 + CmPI595203_01g009100.1 Cmu01g0910 406416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0910 183 Pfam Phloem protein 2 26 175 IPR025886 -
Cmu01g0910 183 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 24 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0910 Cmu-Chr1:11871412 Cmu01g2526 Cmu-Chr1:37126770 6.00E-32 dispersed
Cmu01g0908 Cmu-Chr1:11756608 Cmu01g0910 Cmu-Chr1:11871412 5.10E-87 proximal
Cmu01g0910 Cmu-Chr1:11871412 Cmu01g0911 Cmu-Chr1:11918949 1.10E-65 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0910 - - - 0.0