Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0936 ATGGCGCGAAAATCTTCTCTCCTCAAGCGAACCCTAGCTTCTCTCTGCTTTATTCTGGCCCTATATGCCATTGTTAACACCTTCATCAGCTCCACAGCCACTCTCAAGCTCGACCGCTCCTTCCCCTTCAGCACTGCCAATTCCGTTATGGTCTCCGAAGAATTTGGTTCCCAAGACACTGATCTCCTCAACACCTCTGCGAAATTCGTCTCTCCGGTCAAGATTTACCTTTACGATGTGCCCACCAGGTTTACGTACGGTGTAATTGAGAACCACGGCATAGCGCGCGGAGGAAAATCTGTCCCTAAAGTCACGGACCTTAAGTATCCAGGCCATCAGCATATGGCCGAGTGGTATCTGTTCACGGATCTGCTTCGACCGGAGTCGGAGCGTATTGGGTCTGCTGTGGTTAGGGTTTTCGATCCGGAGGAAGCGGATTTGTATTATGTACCGTTCTTCTCGTCCTTAAGCTTGATCGTCAACCCTATCCGACCTGCAACGGGGTCGGATCAGCAGCAACGGAAGCTTGTGTACAGTGACGAGGAGACGCAGGATGCCTTCATGGAGTGGTTGGAGAAGCAGGAGTACTGGAAGCGGAACTATGGGCGGGATCACGTCATTGTAGCGCAGGACCCTAATGCATTGTACAGGGTGATTGATAGGGTTAAGAACAGTATCTTGCTCGTTTCGGATTTCGGCCGGTTGAGGGCTGACCAAGCCTCGCTAGTTAAGGACGTGATTGTACCATACTCCCATAGGATCAATACTTATAATGGTGACATCGGAGTTGAGAATCGCAAAACTTTATTGTTCTTCATGGGCAATCGATTCCGTAAAGAGGGAGGAAAGATACGTGATATGCTTTTCGATATTCTTGAGGAAGAACGGGATGTCATAATCAAACATGGAACACAATCACGAGAGAGCCGGCGTGCTGCTACACATGGGATGCATACATCTAAGTTCTGCTTGAATCCAGCTGGTGACACTCCCTCTGCGTGTCGACTTTTTGATTCTGTAGTAAGCTTATGTGTACCAGTGATTGTCAGCGATAGTATTGAGTTGCCTTTCGAAGATGTTATAGATTACTCCAAGATTGCGGTGTTTTTTGATTCGGTTTCTGCTGTGAAACCTGGATTTCTGATTTCAAAGCTGAGGAGAATATCCAAAGAGAGGATTCTGGAGTATCAGAGAGAAATGAAAAAGATAAAGAGATACTTTGAGTATACAGACTCAAATGGCACAGTGAACGAAATATGGCGCCAAGTCTCACAGAAGTTACCTCTAATTAAGCTAATGATTAATCGCGGAAGGAGGCTCATTCATGGAGATGGTGATGAACCAGACTGCTCTTGTCTCTGTTCAAACCAAACTGGCATCAGGGCTAGACTATAA 1395 46.81 MARKSSLLKRTLASLCFILALYAIVNTFISSTATLKLDRSFPFSTANSVMVSEEFGSQDTDLLNTSAKFVSPVKIYLYDVPTRFTYGVIENHGIARGGKSVPKVTDLKYPGHQHMAEWYLFTDLLRPESERIGSAVVRVFDPEEADLYYVPFFSSLSLIVNPIRPATGSDQQQRKLVYSDEETQDAFMEWLEKQEYWKRNYGRDHVIVAQDPNALYRVIDRVKNSILLVSDFGRLRADQASLVKDVIVPYSHRINTYNGDIGVENRKTLLFFMGNRFRKEGGKIRDMLFDILEEERDVIIKHGTQSRESRRAATHGMHTSKFCLNPAGDTPSACRLFDSVVSLCVPVIVSDSIELPFEDVIDYSKIAVFFDSVSAVKPGFLISKLRRISKERILEYQREMKKIKRYFEYTDSNGTVNEIWRQVSQKLPLIKLMINRGRRLIHGDGDEPDCSCLCSNQTGIRARL 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12829243 12833337 - CmPI595203_01g009360.1 Cmu01g0936 406442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0936 464 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 61 423 IPR004263 GO:0006486(InterPro)|GO:0016757(InterPro)
Cmu01g0936 464 Pfam Exostosin family 71 384 IPR040911 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0936 Cmu-Chr1:12829243 Cmu09g1019 Cmu-Chr9:10273287 8.30E-70 dispersed
Cmu01g0936 Cmu-Chr1:12829243 Cmu08g0952 Cmu-Chr8:21827920 4.50E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0936 K23200 - csv:101216577 871.307