Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g0946 ATGCAAATTCAGTCAACGTCTAATAAAGTTGTGCATGAGTTATATGCACTTTCGCATGGCCCTGATATTCGAATTAGTTCGTATACTAGGTGTATTATCAATGAAAAGTCATCAAGTAATGAAGATAACATTGTAGACACGAGTAACACTCCCACTAATAACCAAATTCGTGATGTTACACGAGAAGTCGGATTGCATCGTGTGATTGAGGCAAGAGGAGGAAGAATTTCTATCTCATGGGATCCTTCCCCTAAGAAACCAGTTGGGAAAGTCGCAAATCTCTTTAGCAGTGAGATCGAAAAGAGAGAAATTTTCTTGGTTGTAATGGAAGATAATGAGTTAAAAAACAACAAAGAAATGATAATGGAGGATTCACACAATAAGCTTCTAGAAAACACTATAAAAAGCTACACAAAGCTCCATAGCTTCAAGCAAATTTTCAATGGCTTTGCAGTTCACACAACCCCATCACAAGCCTCAAAGCTTAGAGAAGTTGATGGAGTGAAATTGGTTGAGTTAGATAGAGGAGTGAGGAAAATGACTACTTATACCCCTGAGTTTCTAGGACTCGTGCCCTCCAATAATCATAAATATTATTATAATTATAGTGTTATTGGTGGTGGTGGTGAAGGCATTTTGATTGGGTTTGTGGACTCTGGTATTTACCCAACACACCCAAGTTTTAGTTTTGGTAATTTTGATCATCAAGAAGAGGAGTTGTTTTGTGGGGTTTGTGAAGAAGGTCCTTTTTTCCCAAAAGCTTCTTGCAATGGGAAGATAGTGAGTGCAAGGTTTTTCTCTAATGGGGCTCAGGCTATTGCAAAGCTTAACTCTTCCCTTGATTTTCTCTCTCCATTTGATGCTGAAGGCCATGGAAGCCATGTGGCATCCATAGCTGCTGGGAATGCAGGTGTTCCAGTTATTGTAAATGGTTTCTTCTATGGATTGGCCAGTGGAATCGCGCCACGTGCACGAATTGCTGTTTACAAGGCCGTGTATCCAACGGTGGCTACTCTAACCGACGTAATTTCAGCAATAGATCAAGCAGTGGTTGATGGGGTTGATATATTGGCATTATCAGTTGGACCAAATGAACCGCCCGAGGTAGGATTTACCTTCCTAAGCATATATGACATTGCCATATTATCTGCTACAAGAGCTGGAATCCTTGTTGTTCAAGCAGCCGGAAATAATGGCCCTGCCCGGGCAACCGTCGTCTCTTACAGCCCTTGGGCTATTGGCGTTGCAGCCTCCGGCACCGACAGAGTTTATTTGGCCTCACTTCTTCTCGGCAATGGCCAAAAAATTGCAGGAGTAGGACTGTCTGGACCTACCTTAGGGAGGGAGTTTTTCCTACACAAGTTAGTATTGGCTGAGGATGCAAGGAGGTCAAATGAAACACATCCCAACGTACCAAATTACAATGAAGAGTGCCAAAATCCCGAAGCTTTTGACCCAAATATTGTTGAAAACAGCATAGTCCTCTGCTCTTTCTCACAAGGATTCCTCAATGGAACCTCCTCTCTTAAAGCCATCATTCGCACTGCAACAACACTCAGATTCATGGGTTTTGTTCTCCTTGCAAATCCACACTATGGTGATTTCATTGCAGAGCCCATCCCTTTCAAAGTTCCAGGCATACTCGTCCCGACCGTATCAGATACTAAGGTGATACTGAAATACTATGAAGAAAATACATGGAAGGATAGAAGGGGAATTGTTAGTGAATTTAAAGGGAAAGCAGGCATTGGAGAAGGAAGAGTTGCTTCATTTGGAAGGCAAGCAGCCAGTGTTAGCAGATTTTCATCAAGAGGACCAGATTACATCAACATAAATAGGACTATAGCTGATATACTAAAGCCTGATATTCTTGCACCAGGTCACCAAATCTGGGCTGCTTGGAGCCCTCTTAGTGGCTCACAGCCACTTTTAAAGGGATACCATTTTGCACTGTTATCTGGAACAAGTATGGCAGCACCTCATATTGTGGGAATAGCAGCACTTATCAAGCAAAAGTATCCTTCTTGGACTCCTTCCATGATAGCTTCTGCAATGTCCACAACTGCTACAAAGTATGATATGAATGGAGACCTTATTCAGGCAGAGGGATTCAACCTTCATAGTTTATATCCTTCTACTCCCTTCGACTTTGGCGCTGGCCTCGTTTCTCCGACCAACGCTTTGGACCCGGGACTCGTCTTCCCTTCAGAATATGAAGACTATATAAACTTCTTGTGCTCTTTACCTGGGGTTGATCCTACTGTCATCAGAAGTGCCACCGGAGGACAGTGCAATGCCTCTATCCCACAGCCACACCCTGCAGATCTGAACCTTCCTTCAGTCACCATATCATCATTGGTTGGGAATCAGGTAGTGCAGAGAAGAGTGAAGAATGTAGGAGGCAAAGTGGAGACTTATGTGTGGTCAGTGATACCGCCAAATGGGACAACAGTCAACATCAATCCGCCATGGTTCACCGTAGCGCCCGAAGAAGTCCAAAACTTGGAAATACAAATCAATGTCACACACAAAATGGATCATTTTACCTTCGGGGAGATTATTTTGACAGGAAGTTTAAACCATATTGCAAGAATCCCTTTGTCAGTTTTGGCTGTTTCTGCATCCTGA 2628 42.96 MQIQSTSNKVVHELYALSHGPDIRISSYTRCIINEKSSSNEDNIVDTSNTPTNNQIRDVTREVGLHRVIEARGGRISISWDPSPKKPVGKVANLFSSEIEKREIFLVVMEDNELKNNKEMIMEDSHNKLLENTIKSYTKLHSFKQIFNGFAVHTTPSQASKLREVDGVKLVELDRGVRKMTTYTPEFLGLVPSNNHKYYYNYSVIGGGGEGILIGFVDSGIYPTHPSFSFGNFDHQEEELFCGVCEEGPFFPKASCNGKIVSARFFSNGAQAIAKLNSSLDFLSPFDAEGHGSHVASIAAGNAGVPVIVNGFFYGLASGIAPRARIAVYKAVYPTVATLTDVISAIDQAVVDGVDILALSVGPNEPPEVGFTFLSIYDIAILSATRAGILVVQAAGNNGPARATVVSYSPWAIGVAASGTDRVYLASLLLGNGQKIAGVGLSGPTLGREFFLHKLVLAEDARRSNETHPNVPNYNEECQNPEAFDPNIVENSIVLCSFSQGFLNGTSSLKAIIRTATTLRFMGFVLLANPHYGDFIAEPIPFKVPGILVPTVSDTKVILKYYEENTWKDRRGIVSEFKGKAGIGEGRVASFGRQAASVSRFSSRGPDYININRTIADILKPDILAPGHQIWAAWSPLSGSQPLLKGYHFALLSGTSMAAPHIVGIAALIKQKYPSWTPSMIASAMSTTATKYDMNGDLIQAEGFNLHSLYPSTPFDFGAGLVSPTNALDPGLVFPSEYEDYINFLCSLPGVDPTVIRSATGGQCNASIPQPHPADLNLPSVTISSLVGNQVVQRRVKNVGGKVETYVWSVIPPNGTTVNINPPWFTVAPEEVQNLEIQINVTHKMDHFTFGEIILTGSLNHIARIPLSVLAVSAS 875
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13140089 13157027 - CmPI595203_01g009460.1 Cmu01g0946 406452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g0946 875 Pfam Fibronectin type-III domain 775 869 IPR041469 -
Cmu01g0946 875 ProSitePatterns Serine proteases, subtilase family, serine active site. 654 664 IPR023828 -
Cmu01g0946 875 ProSiteProfiles Serine proteases, subtilase domain profile. 185 728 - -
Cmu01g0946 875 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 214 225 IPR023827 -
Cmu01g0946 875 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 90 178 IPR037045 -
Cmu01g0946 875 Gene3D - 421 591 - -
Cmu01g0946 875 Pfam Subtilase family 209 695 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu01g0946 875 CDD PA_subtilisin_like 427 566 - -
Cmu01g0946 875 SUPERFAMILY Subtilisin-like 180 732 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu01g0946 875 PRINTS Subtilisin serine protease family (S8) signature 653 669 IPR015500 -
Cmu01g0946 875 PRINTS Subtilisin serine protease family (S8) signature 209 228 IPR015500 -
Cmu01g0946 875 PRINTS Subtilisin serine protease family (S8) signature 287 300 IPR015500 -
Cmu01g0946 875 Pfam Peptidase inhibitor I9 105 178 IPR010259 -
Cmu01g0946 875 ProSitePatterns Serine proteases, subtilase family, histidine active site. 291 301 IPR022398 -
Cmu01g0946 875 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 124 828 IPR045051 -
Cmu01g0946 875 Gene3D - 745 872 - -
Cmu01g0946 875 Gene3D Peptidase S8/S53 domain 211 741 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0946 Cmu-Chr1:13140089 Cmu11g1195 Cmu-Chr11:23258692 1.20E-162 dispersed
Cmu01g0946 Cmu-Chr1:13140089 Cmu05g0855 Cmu-Chr5:7706739 2.80E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g0946 - - - 0.0