Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1004 ATGGCCATCTCCATTGCCTTCTCGACGAACACCCACTTCCCATTTTCTACAATTTGCAGATCAATTTCCTCTCTCAGTCCATCCGTCGATGTTCTTTTTAACGCCAGGAGAGATTGCAATCGTGGGTTTCCTCTAATTAGAACATTGGACACCAAATTGGCAAAAACCAGGGCTGCATTGTCTGAAAATTCTTACCGCAAGCAGTACTCAAAAGTGGGTGCCAAATCTATTGGACCCATTCCACCTGCCCAGCTAATTCAAGTCGTTGAGAATGCTGCCAAGACAGGAGCCGAGGTGGTGATGGATGCTGTTAATAAGCCTCGGAATATTGAATATAAAGGATTGGCGGACTTAGTAACGGAAACAGATAAAATGAGTGAGGCTGCTATTCTGGAAGTCGTTAGAAAGAACTTTAGAGATCACCTCATCCTTGGAGAAGAGGGAGGAGTTATAGGGGATTCATCATCTGATTATCTTTGGTGCATTGATCCTTTAGATGGAACAACAAATTTTGCACATGGCTATCCTTCCTTTGCAGTATCTGTCGGAGTTTTATTTCGGGGAAATCCTGCTGCTGCAGCTGTGGTAGAGTTTGTTGGGGGTCCTATGTGCTGGAACACTCGCATATTTACTGCAACTGCTGGTGGGGGAGCATTCTGTAATGGCCAAAAGATTAATGTGAGTCAAACTAGCCAGGTGGAACGATCTCTTCTAGTTACAGGATTTGGATACGAACATGATGATCCATGGGCTACAAATATGGATTTATTTAAAGAATTCACAGATGTCAGCAGGGGAGTAAGAAGGCTCGGTGCAGCAGCAGTCGACATGAGCCATGTAGCTCTAGGAATTGTAGAAGCATATTGGGAGTATCGCCTGAAGCCATGGGATATGGCTGCAGGTGTTTTGATAGTTGAAGAAGCAGGTGGAGCAGTGACTCGCATGGATGGTGGAAAGTTCAGTGTCTTTGATAGATCTGTTTTGGTTTCTAATGGTGTTGTACATGACAAGCTTTTGGAGAAAATTGGTTGTGCAACCGAAAAACTAAAAAGCAAAGGAATTGATTTCTCATTGTGGTATAAACCAGAAAACTACCAGACAGATCTTTGA 1110 43.51 MAISIAFSTNTHFPFSTICRSISSLSPSVDVLFNARRDCNRGFPLIRTLDTKLAKTRAALSENSYRKQYSKVGAKSIGPIPPAQLIQVVENAAKTGAEVVMDAVNKPRNIEYKGLADLVTETDKMSEAAILEVVRKNFRDHLILGEEGGVIGDSSSDYLWCIDPLDGTTNFAHGYPSFAVSVGVLFRGNPAAAAVVEFVGGPMCWNTRIFTATAGGGAFCNGQKINVSQTSQVERSLLVTGFGYEHDDPWATNMDLFKEFTDVSRGVRRLGAAAVDMSHVALGIVEAYWEYRLKPWDMAAGVLIVEEAGGAVTRMDGGKFSVFDRSVLVSNGVVHDKLLEKIGCATEKLKSKGIDFSLWYKPENYQTDL 369
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 14915365 14923205 - CmPI595203_01g010040.1 Cmu01g1004 406510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1004 369 Gene3D - 83 225 - -
Cmu01g1004 369 FunFam Inositol-1-monophosphatase 226 355 - -
Cmu01g1004 369 SUPERFAMILY Carbohydrate phosphatase 84 342 - -
Cmu01g1004 369 Gene3D - 226 349 - -
Cmu01g1004 369 PRINTS Inositol monophosphatase superfamily signature 117 137 IPR000760 -
Cmu01g1004 369 PRINTS Inositol monophosphatase superfamily signature 215 238 IPR000760 -
Cmu01g1004 369 PRINTS Inositol monophosphatase superfamily signature 293 317 IPR000760 -
Cmu01g1004 369 PRINTS Inositol monophosphatase superfamily signature 262 283 IPR000760 -
Cmu01g1004 369 PRINTS Inositol monophosphatase superfamily signature 139 155 IPR000760 -
Cmu01g1004 369 PRINTS Inositol monophosphatase superfamily signature 160 176 IPR000760 -
Cmu01g1004 369 PANTHER INOSITOL MONOPHOSPHATASE 84 344 - GO:0006020(PANTHER)|GO:0007165(PANTHER)|GO:0008934(PANTHER)|GO:0046855(PANTHER)
Cmu01g1004 369 ProSitePatterns Inositol monophosphatase family signature 1. 160 173 IPR020583 -
Cmu01g1004 369 FunFam Inositol-1-monophosphatase 82 225 - -
Cmu01g1004 369 ProSitePatterns Inositol monophosphatase family signature 2. 296 310 IPR020550 GO:0046854(InterPro)
Cmu01g1004 369 CDD IMPase 85 331 IPR033942 GO:0008934(InterPro)
Cmu01g1004 369 Pfam Inositol monophosphatase family 84 342 IPR000760 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1004 Cmu-Chr1:14915365 Cmu01g1018 Cmu-Chr1:15402454 1.30E-33 dispersed
Cmu11g0414 Cmu-Chr11:4558399 Cmu01g1004 Cmu-Chr1:14915365 2.30E-19 transposed
Cmu01g1004 Cmu-Chr1:14915365 Cmu01g2088 Cmu-Chr1:33757934 1.90E-29 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1004 K01092 - csv:101218450 692.189