Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1058 ATGAAAATTAGTGTTCTTGGGTTTGATCCTTTCGAAGTGGATCGTTCATGCAGCGGATTGATTTCGTGTAGTGGGTTGCGGGAAAATGGTGGCTTGTTCATGGCGAGTGGCATTGACCTGTGTAATGTGCCTGAGGAAGGGTATGTTTCGCCAGTTTCTGCCTGTGGATTAGTATCATGTGATGGAATTTTTATGTTGAAGAGCTTTATTGATTTTCTGATGGACTCTGGTGATGTTGAGCAATCCTTGCTTCCTAAGCTCTCCGATTCTGATAAGAGGAAATCTCTCCAGAGAAGAAAATCTAACCGTCATGGTAGTTTTTCACATTCAGTAGAAAATAATAATCAACCACAAAATTATGATGTAATATCTCATCAACGTATTGCTGTTTCACAAGTTAGTTTTAGGAAAGTATTTGTTCTTCTCGCGACTTATTTGGGAGGGGGCACGTTTTGTTTTTTCCTTGTTCGGGATCAGATCACTGGCAAGAAAACAAATGGGATTGTTGATGCCATTTACTTTTGTGTTGTAACAATGACCACCGTTGGGTATGGTGATCTTGTTCCTAACAGCATAGTTGCAAAACTACTTGCATGTGCTTATGTCTTCACTGGAATGACTCTTGGTGGGATGATCCTTAGCAAGGCAGCCGATTACATTGTGGAAAAGCAGGAAATTCTTCTGGTTAAGGCCATGTACATGAGGAAAAAGATCAGCTCCAGCGAGATCCTTCAGGAATCTGAGGCTCACAAATTGAAATACAAATTCATTATGACTGGAATCCTCCTTTGGACTCTTGTCTTTGTTGGAGCTCTTTTCTTGACTGTGGTTGAGAAGCTAGAGTTCATAGATGCCTTTTATTGCGTTTGTTCCACTATCACGACTCTTGGATATGGGGATGAGAGCTTCTCTACAACAGCTGGTCGTGTTTTTGCTGTCATTTGGATAATGAGCAGTACCATCTGCTTAGCACAGTTCTTTCTGTACCTTGCAGAATTACACACAGAAAGGAGACAAGAATCACTGGTAAATTGGGTTCTCAGCCGAAGCCTCACGTACTCGGATCTTGAAGAAGCAGACCTTGATCATGATAAAGTAGTAAGCGCTGCAGAATTTGTTATATATAAACTGAAGGAAATGGGGAAGATCAATCAGGAAGACGTTTCTCCCATACTTGAAACTTTTAAGAAGCTTGACATTGATCAATCAGGAAACGATAACTCTTGTAGAGCATTGGATGAGGTCGTCCTGCGACATAATCTAGAATCCCTTCACCTGCTCTTACACCATGAACTTCGGTTCCAACTTGGAAACCGCCTCCAAAGGCGACCATTGCCACCAAGAGTACGGCTGTGGAGGCAAAGAGAGGCCAAAAGAAAGCTAGAATACTTAGAAACCGAGGAGCTGCATATACAAACAATGACAGAACCACTGAAACTGCTGCTACAACAGTTATTTGGTCTTTGTGTTGGAGAACCTTTGTTTGAATGTCCATGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGAAATAGAGAGAGAGAAAACAGAGAGGAATTTGCTATAAGTGATGATGATTCCTATGAGTCTCTCCTTTTCTGGTAA 1611 41.71 MKISVLGFDPFEVDRSCSGLISCSGLRENGGLFMASGIDLCNVPEEGYVSPVSACGLVSCDGIFMLKSFIDFLMDSGDVEQSLLPKLSDSDKRKSLQRRKSNRHGSFSHSVENNNQPQNYDVISHQRIAVSQVSFRKVFVLLATYLGGGTFCFFLVRDQITGKKTNGIVDAIYFCVVTMTTVGYGDLVPNSIVAKLLACAYVFTGMTLGGMILSKAADYIVEKQEILLVKAMYMRKKISSSEILQESEAHKLKYKFIMTGILLWTLVFVGALFLTVVEKLEFIDAFYCVCSTITTLGYGDESFSTTAGRVFAVIWIMSSTICLAQFFLYLAELHTERRQESLVNWVLSRSLTYSDLEEADLDHDKVVSAAEFVIYKLKEMGKINQEDVSPILETFKKLDIDQSGNDNSCRALDEVVLRHNLESLHLLLHHELRFQLGNRLQRRPLPPRVRLWRQREAKRKLEYLETEELHIQTMTEPLKLLLQQLFGLCVGEPLFECPWRRRRRRRRRRRRRNRERENREEFAISDDDSYESLLFW 536
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 16386426 16390321 + CmPI595203_01g010580.1 Cmu01g1058 406564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1058 536 MobiDBLite consensus disorder prediction 90 114 - -
Cmu01g1058 536 Pfam Ion channel 265 333 IPR013099 -
Cmu01g1058 536 Pfam Ion channel 141 221 IPR013099 -
Cmu01g1058 536 SUPERFAMILY Voltage-gated potassium channels 251 335 - -
Cmu01g1058 536 SUPERFAMILY EF-hand 346 404 IPR011992 -
Cmu01g1058 536 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 133 420 IPR003280 GO:0005267(InterPro)|GO:0005887(PANTHER)|GO:0009705(PANTHER)|GO:0015271(PANTHER)|GO:0016020(InterPro)|GO:0022841(PANTHER)|GO:0030322(PANTHER)|GO:0071805(PANTHER)|GO:0071805(InterPro)
Cmu01g1058 536 SUPERFAMILY Voltage-gated potassium channels 131 235 - -
Cmu01g1058 536 Gene3D - 130 226 - -
Cmu01g1058 536 PRINTS Two pore domain K+ channel signature 177 205 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu01g1058 536 PRINTS Two pore domain K+ channel signature 294 303 IPR003280 GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Cmu01g1058 536 Gene3D - 231 345 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1058 Cmu-Chr1:16386426 Cmu09g2025 Cmu-Chr9:36320271 4.90E-90 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1058 K05389 - csv:101214791 610.527