Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1107 ATGAAGATATCTAATTCCATCTTTATTTTATTTTCATTATTCCTTTTGTTAATATCACCTGCCATTGCTGCTAAAAAGTCATATGTTGTGATATTGGGATCCCATTCACATGGGTTAGAAGTTACTGAGGAAGATCTTGAAAGGGTGGTTCATTCCCATCACAAATTGCTTGGATCCTTCTTGGGCAGTGATGAGAAGGCAAAAGAGGCCATATTTTACTCCTATAAGAAGCATATTAACGGCTTTGCAGCCATTCTGGACGAGGAAGACGCAACCCAACTTGCAAATCATCCCGAGGTAGCAGCAGTATTGCCAAACAGAGCGAAAGAATTACACACAACACATTCATGGGAATTTATGCATTTGGAGAAGAATGGGGTGATTCCTCCTTCTTCTCCTTGGCACAGGGCTAAATCTGGAAAAGATGTCATTATTGCCAACCTTGACACTGGTGTATGGCCAGAGTCCAAGAGTTTTGGAGAACATGGCATAGTTGGACCTGTTCCATCAAAGTGGAAAGGAGGTTGCACTGATAAAACCCCTGATCGAGTGCCTTGTAACAGGAAATTAATCGGAGCAAAGTACTTCAACAAGGGATTCCTGGCCTACTTGAAATCTGAAAATTATACGGACCTCTCATCTGTCATCAACTCCACTCGCGACTACGAAGGTCATGGGTCTCACACCTTGTCCACGGCCGGGGGTAGCTACGTGTCTGGTGCCAGCGTGTTTGGGTCGGGTGTCGGAACTGCCAAAGGTGGATCTCCCAAGGCTCGCGTTGCTGCCTACAAGGTCTGCTGGCCACTTGAGGGTGGTGGGTGCTTCGATGCCGACATCGCCGAGGCATTTGACCATGCCATCGATGATGGTGTCGATGTTCTTTCACTCTCCCTCGGCGGCGATCCAGCCGATTACTTTGGCGATTCCATTGCCATTGCCTCTTTCCATGCAATGAAGAAGGGTATCCCTGTGGTGTGCTCTGCCGGCAACTCCGGCCCTGATGCCTGGACTGTTTCTAATACTGCACCTTGGATTTTGACGGTTGCTGCAAGTACTTTAGACCGTGAGTTTCAGGCTCCTGTTGAGCTCCAAAATGGCCATCGTTACATGGGTTCGAGCCTTTCGAAAGCATTGAGAGAAAAGAAGTTGTACCCATTGATTACGGGAGCTCAGGCGAAAACAAAGAACGCCACAGCGGATGAGGCCATGCTTTGCAAGCCGGAAACATTGGATCATTCAAAAGTAAAAGGGAAGATAGTGGCTTGCTTGAGAGGAGACAATGCAAGAGTGGACAAAGGAGAAGAAGCTGCTCTTGCCGGTGCTGCCGGAATGATTCTATGCAACGATATGCTTAGTGGATTTGAAACCATTGCTGATCCCCATGTTCTTCCAGCTTCCCATATCAATTACAATGACGGCCAAGCTGTTCTCTCTTACATCATCAATTCCACCAAAAATCCAATGGGTTATTTAATCCCACCATCGGCTAAAGTTAACACCAAGCCTGCTCCCTCTATGGCGGCCTTCTCATCTCGAGGACCCAACTTTATTTCACCCGAGATTATCAAGCCGGATGTGACTGCACCTGGCGTAAACATAATCGCCGCATTCTCAGAAGCCGTAAGCCCAACAGGTGAGGCATTCGACAACAGAACGGCTCCATTCATAACAATGTCAGGCACCTCCATGTCTTGCCCACACGTGGCAGGCCTGGTTGGCCTCCTCCGAACTCTCCACCCTCACTGGAGCCCTTCTGCCATCAAATCTGCCATCATGACCTCTGCCAGGGTTCTTGACAACACAATGAAACCCATGCTTGACGGTGGCTCCCCTGACCTCGCCCCTGCCACCCCCTTCGCCTACGGCTCCGGCCACATTCGCCCCGTGGGAGCCATCGACCCTGGCCTCGTCTATGACCTCTCACCCAACGACTACTTGGAATTCCTCTGCGCTAGCGGGTACGATGTGAAGAGCATTCGGGCATTCTCTGACGGCCCTTTCAACTGCCCTGCCTCTGCTTCTATTTTGAACTTCAATTACCCCTCCATTGGGGTTCAGAATTTGAATGGAAGTGTCACCCTCACTAGGAAGCTGAAGAACGTTGGCACTCCTGGGGTTTACAGACCCAAAATTCTCCACCCGGATGGAGTTAAAGTTTCACTGAAGCCTAGAGTTCTCAAGTTTGAGAGAGTTGCAGAGGAGAAGAGCTTTGAATTGACCATCACCGGAGCTGTGCCACAGAATCAGGTTGTTAACGGCGTGTTGATTTGGACGGACGGCAAGCACTTTGTTAGAAGTCCCATTCTCGTTTCTTCTAACTTGTTCTGA 2328 49.01 MKISNSIFILFSLFLLLISPAIAAKKSYVVILGSHSHGLEVTEEDLERVVHSHHKLLGSFLGSDEKAKEAIFYSYKKHINGFAAILDEEDATQLANHPEVAAVLPNRAKELHTTHSWEFMHLEKNGVIPPSSPWHRAKSGKDVIIANLDTGVWPESKSFGEHGIVGPVPSKWKGGCTDKTPDRVPCNRKLIGAKYFNKGFLAYLKSENYTDLSSVINSTRDYEGHGSHTLSTAGGSYVSGASVFGSGVGTAKGGSPKARVAAYKVCWPLEGGGCFDADIAEAFDHAIDDGVDVLSLSLGGDPADYFGDSIAIASFHAMKKGIPVVCSAGNSGPDAWTVSNTAPWILTVAASTLDREFQAPVELQNGHRYMGSSLSKALREKKLYPLITGAQAKTKNATADEAMLCKPETLDHSKVKGKIVACLRGDNARVDKGEEAALAGAAGMILCNDMLSGFETIADPHVLPASHINYNDGQAVLSYIINSTKNPMGYLIPPSAKVNTKPAPSMAAFSSRGPNFISPEIIKPDVTAPGVNIIAAFSEAVSPTGEAFDNRTAPFITMSGTSMSCPHVAGLVGLLRTLHPHWSPSAIKSAIMTSARVLDNTMKPMLDGGSPDLAPATPFAYGSGHIRPVGAIDPGLVYDLSPNDYLEFLCASGYDVKSIRAFSDGPFNCPASASILNFNYPSIGVQNLNGSVTLTRKLKNVGTPGVYRPKILHPDGVKVSLKPRVLKFERVAEEKSFELTITGAVPQNQVVNGVLIWTDGKHFVRSPILVSSNLF 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 17921733 17925642 + CmPI595203_01g011070.1 Cmu01g1107 406613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1107 775 FunFam subtilisin-like protease SBT1.5 354 498 - -
Cmu01g1107 775 Gene3D Peptidase S8/S53 domain 142 645 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu01g1107 775 ProSiteProfiles Serine proteases, subtilase domain profile. 116 632 - -
Cmu01g1107 775 Pfam Subtilase family 140 601 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu01g1107 775 CDD Peptidases_S8_3 109 595 IPR034197 -
Cmu01g1107 775 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Cmu01g1107 775 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Cmu01g1107 775 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Cmu01g1107 775 SUPERFAMILY Subtilisin-like 111 636 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu01g1107 775 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 53 768 IPR045051 -
Cmu01g1107 775 Gene3D - 354 499 - -
Cmu01g1107 775 Pfam PA domain 401 475 IPR003137 -
Cmu01g1107 775 CDD PA_subtilisin_like 361 491 - -
Cmu01g1107 775 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 112 IPR037045 -
Cmu01g1107 775 Gene3D - 649 773 - -
Cmu01g1107 775 FunFam Subtilisin-like protease SBT5.3 17 112 - -
Cmu01g1107 775 Pfam Fibronectin type-III domain 677 770 IPR041469 -
Cmu01g1107 775 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Cmu01g1107 775 Pfam Peptidase inhibitor I9 27 112 IPR010259 -
Cmu01g1107 775 FunFam Subtilisin-like protease SBT1.5 142 367 - -
Cmu01g1107 775 SUPERFAMILY PA domain 412 479 IPR046450 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1107 Cmu-Chr1:17921733 Cmu02g0310 Cmu-Chr2:2817119 8.30E-248 dispersed
Cmu01g1102 Cmu-Chr1:17870245 Cmu01g1107 Cmu-Chr1:17921733 6.20E-62 proximal
Cmu01g1103 Cmu-Chr1:17870758 Cmu01g1107 Cmu-Chr1:17921733 9.80E-54 proximal
Cmu01g1104 Cmu-Chr1:17871686 Cmu01g1107 Cmu-Chr1:17921733 5.10E-71 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1107 - - - 0.0