Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1207 ATGTTTGCTAAAAATCTCCACTTCTTCTTTTGGCTCTTACTTTCTCTTCTCATTCTTCACTCAACATCATCATCATCATCTATTTCTTCACAAGTGTATATAGTGTACTTAGGGCACAACCGTTTGAGTGATGATGCAACTTTGACCTCCAAATACCATCTTCATCTACTCTCAAAAGTGTTTGCAAGTGAAGAAGGTGGTAAAAGAGCCATGTTGTATAGTTACAAGAAAAGTTTTTCGGGGTTCTCAGCAAAGCTTAATGCAAGCCAAGCAATAGCATTATCAAAGATGGAAGGAGTGATATCCGTATTCGAGAGTAAAACAATGCAACTTCACACAACAAGAAGTTGGGATTTCTTGGGCCTTCCTATAATTCCCTCATATACTAATAATATTAAACCATTATTTCCACTTCGCCTTCCTAGCTATGGCGATCACGATGTTGTCGTTGGCATCTTCGATTCAGGTGTGTGGCCAGAATCTGAAAGTTTCAAGGAGAGTGAGGAGATGGGGAGACTTCCATGCAATTGGAAAGGTAAATGTGTGAAAGGATACAGATTTAACCCGGCCTTAGCCTGTAACCGCAAGCTAATTGGTGCTCGCTACTACCTTAAAGGCTTCGAAGCCCAATACGGAGCCCTCAACACCACCGCCGGCAACCCCGAGTTCCGCTCCCCTCGAGACTTCTTAGGTCATGGAACTCACACAGCTTCCACTGCGGTGGGTGCGGTCGTGCATAATGTCACCTTCACTACATCTTCATCACTGGCTAAAGGCATTGCCCGAGGTGGGGCTCCCTGGGCCAGGCTGGCAGTGTACAAAGTGTGTTGGGGAAAGGACTACGAGGGCAAGTGCACCGATGCCGACGTCATGGCCGCTTTCGACGACGCTTTGCACGACGGAGTGGACGTCATCTCCGCCTCGTTTGGAGAGACGCCGCCGTTGGCTCCGTTGTTTGAGTCGGCCTCGGCTATTGGCTCATTCCATGCGATGCAGCGGGGAGTGAGCGTGGTGTTCTCTGCTGGGAATGATGGACCCCACCCTTCCCTTGTTCAAAATGTGTCTCCTTGGAGTATTTGTGTTGCTGCTTCTACTATGGATCGAACTTTTCCCACTCCAATACTTATTCACAACCATTTCTCAATCATGGGGGAGAGCTTGATCACAAGAAATATAATAAACGTAAAGCTGGCAGATTCAATCAACTATTTCATAGATGGAATTTGTGAGAGAGACAACATAAGGAAAGGAGGGAAGTCGGGTAAAGGGAAAGTGGTAGTCTGTTTCTCAACCATTGGCCCAGTTTCCATAGGAACTGCACAAGAAGCAGTGAGAGCCATCAATGGCTCCGCTTTAATATTTGGTGCGCCCCCCACGACGGAGCTCCCAGATCTAGATCTCATCCCCACCGTTCGAATTGACATTGCTCAGGCGACTCAAATTCGAAACTTTCTTGCTGAATTACCCAGACTGCCGGCCGTCGAGATCGGCGTCGCGAGAAGTGTGATTGGGAAATCCGTAGCTCCTAGTGTGGCTTACTTTTCATCCAGAGGACCAAGCTCTATCTTACCTGACATTCTCAAGCCAGATATAAGTGCCCCAGGAGTGAACATATTGGCAGCATGGCCTCCGGAAACAGCTCCGACGGTGAGGCCAAGTGGAAGCGTTATTGAAGAAGAAGGTGTAAAATGGAATTTCCAGTCAGGGACTTCAATGTCATGTCCTCATATCTCTGGAGTAGTTGCCCTTATCAAATCTCTTCATCCCCATTGGTCACCTGCCGCCATTAGATCTGCCATCATCACCACAGCCACGAAGAGGGACTCTAGTGGGAATAGCATCCTAGCAGGCGGATCCATGAAACCATCAGACCCATTTGACGTTGGTGCAGGTCAAGTGAACCCCTTAAAGGCCATAAATCCAGGTCTAATCTACGACATCACAACCAGCGATTACATTAGTTTCCTATGCAATATTGGGTATACAGAACAACAAATCAAGATGCTAATTCTCAACCCTTCTCCTCAATTTTGTTGTCCTCCTCAATCCACTACTACCATTAATATTGCAAATCTTAATTATCCGTCAATTACACTTACAAATCTTGGCTCTACCATCACACTCAAAAGAATTGTCCGCAATGTATCACTCAACAAAAACGCCATTTACTTTCTTAGGATTCTTCCTCCCAAGGGAGTCCGAGTACAAGTCTGGCCAAGGATCCTGCTTTTCTCTTGCTTTAGGCAACACCTTTCTTACTATATTACCATAACTCCGCTCAAGAAATCTCGAGGTAGATATGATTTTGGGGAGATTCAATGGTTTAATCGCTTCCATACTGTCACAAGTCCTCTCGTTGTACGTCTTGCCACTTCTACATAA 2382 46.1 MFAKNLHFFFWLLLSLLILHSTSSSSSISSQVYIVYLGHNRLSDDATLTSKYHLHLLSKVFASEEGGKRAMLYSYKKSFSGFSAKLNASQAIALSKMEGVISVFESKTMQLHTTRSWDFLGLPIIPSYTNNIKPLFPLRLPSYGDHDVVVGIFDSGVWPESESFKESEEMGRLPCNWKGKCVKGYRFNPALACNRKLIGARYYLKGFEAQYGALNTTAGNPEFRSPRDFLGHGTHTASTAVGAVVHNVTFTTSSSLAKGIARGGAPWARLAVYKVCWGKDYEGKCTDADVMAAFDDALHDGVDVISASFGETPPLAPLFESASAIGSFHAMQRGVSVVFSAGNDGPHPSLVQNVSPWSICVAASTMDRTFPTPILIHNHFSIMGESLITRNIINVKLADSINYFIDGICERDNIRKGGKSGKGKVVVCFSTIGPVSIGTAQEAVRAINGSALIFGAPPTTELPDLDLIPTVRIDIAQATQIRNFLAELPRLPAVEIGVARSVIGKSVAPSVAYFSSRGPSSILPDILKPDISAPGVNILAAWPPETAPTVRPSGSVIEEEGVKWNFQSGTSMSCPHISGVVALIKSLHPHWSPAAIRSAIITTATKRDSSGNSILAGGSMKPSDPFDVGAGQVNPLKAINPGLIYDITTSDYISFLCNIGYTEQQIKMLILNPSPQFCCPPQSTTTINIANLNYPSITLTNLGSTITLKRIVRNVSLNKNAIYFLRILPPKGVRVQVWPRILLFSCFRQHLSYYITITPLKKSRGRYDFGEIQWFNRFHTVTSPLVVRLATST 793
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23690309 23698819 + CmPI595203_01g012070.1 Cmu01g1207 406713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1207 793 SUPERFAMILY Subtilisin-like 7 697 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu01g1207 793 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 33 785 IPR045051 -
Cmu01g1207 793 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 112 IPR037045 -
Cmu01g1207 793 CDD Peptidases_S8_3 110 605 IPR034197 -
Cmu01g1207 793 FunFam Subtilisin-like protease SBT1.5 147 400 - -
Cmu01g1207 793 Gene3D - 367 503 - -
Cmu01g1207 793 Pfam Subtilase family 146 611 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu01g1207 793 Gene3D - 656 790 - -
Cmu01g1207 793 Pfam Peptidase inhibitor I9 32 112 IPR010259 -
Cmu01g1207 793 Pfam Fibronectin type-III domain 691 787 IPR041469 -
Cmu01g1207 793 PRINTS Subtilisin serine protease family (S8) signature 145 164 IPR015500 -
Cmu01g1207 793 PRINTS Subtilisin serine protease family (S8) signature 228 241 IPR015500 -
Cmu01g1207 793 PRINTS Subtilisin serine protease family (S8) signature 568 584 IPR015500 -
Cmu01g1207 793 FunFam Subtilisin-like protease SBT5.3 21 112 - -
Cmu01g1207 793 Gene3D Peptidase S8/S53 domain 147 652 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu01g1207 793 ProSiteProfiles Serine proteases, subtilase domain profile. 116 639 - -
Cmu01g1207 793 ProSitePatterns Serine proteases, subtilase family, serine active site. 569 579 IPR023828 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1207 Cmu-Chr1:23690309 Cmu01g2355 Cmu-Chr1:35621593 9.00E-141 dispersed
Cmu07g0819 Cmu-Chr7:20831193 Cmu01g1207 Cmu-Chr1:23690309 4.70E-156 transposed
Cmu01g1207 Cmu-Chr1:23690309 Cmu10g2639 Cmu-Chr10:33141908 9.20E-69 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1207 - - - 0.0