Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1221 ATGTTGAACAAAGCGACGGAGAAGGGTGTCAAGGGGCTTTTTTCGGAAGATGCAAATGCTCAAGGAGATTCAAATCCGAATCCTCTTTCGAAAGTGTTGTTTGAGCAAGTGAGTTGGGATGGGTTAGTAAGCAATGGTGATGTCGCTCAAGTGAAGGTGCCGAAGGCTGTGGATGGAGTTGCTGACACAAAAGTGATGAATAAAACGGGCTTTGAGAATCAGAAGGCTCCGCCTTTTGATAGAGGCTATTCCTCAGGTCTTGCTATTGGGTCTTGCTCCTACTCCTATCTGATGGTAAGCACGGTTGGCAATATGAGCCAAGTAAGTCCTCTTTCTTTGGTTTCTTATCCTCCGTCCGAGTTGGGGTTGCTTGAGAGTGAGGCTGGTGTCATTCCGTCCAATTTGCTGTTTTCGTTTCCTTGTAATGTGGGTGGGGGAGATGGTAGGTGGCTGGTGTTTGATCCTTTGGTTCATGCTGCAAGTTATAGGTCAAGGGGTGATGGTATGCTTCTTACCAACGGGGGTGTTCTTGGAGCTCCTTTAGCTACTCCTAGTTCTCTTGATTCTCAGACCTCACGGTCGAGTATTGGCATTGAAAACCCGGGGTGGGCCGCTCTACCCTTGGTGGGAATCAAACAACTAAAGGTTAAGGGAGAGGATTCCTTCTTGATCCTTAATCACATGGTTGAGTTTTTTGAAGCCATGTCTGATCTTAAAATTAACAGGAGCAAGTGTCAAATTTTGGGGATTAATAGTGACCTTGAGAAGATTGAGAGATGGGTAGAGATGTTTGGGTGTGAGGTGATTGATGACATAATTTCTCGTGGATGCTTGCCAATGATAGTGGGTGGAACAAATTATTATATACAGGCTCTTGTTAGCCCGTTTCTTCTGGATGATTCTGCCGAAAATGTTGGTGGAAGTTGCTCCATTTATCCTGGAGATGAAGAGCTGGGTATTGAGTTGAATGAGGGAAGAGATGGTTTGAAGTATGACCATAACCATCTTAAAGAGATTGATCCAGTTTCAGCTAACAGAATCCATCCTAATAACCACAGAAAAATAAATCAATACCTGAGTTTGTATTACCGCACTGGTGTTCTTCCCAGCACACTTTTTCAAGGAACGGCTAATGAGGTATGGATCTTCTTTCCATTGAGCTATGTAACCATGGAATGGCAGAATTGGGGTCAAGCTGATAGTTTCAGATATGATTGCTGCTTGATATGTGTCGATGCTTCTGTTCCACAACTTGATGGACATGTTGATTCTAGAGTTGATAGCATGATGGCTGCTGGATTACTTGATGAGGTTTATGACATTTACAATCCAAATGCAAACTATACTAAAGGAGTGCGTCAAGCTATTGGTGTTCGGGAGTTTGAAGAGTTTTTGAGATATTATGTACCTAAAGGTAGATGTGAAAAAGATAGTGCTGGTCTTAGCCCAAAAAAAATAATGGAGTGCAACGAGATTGAGAATATAAGGTCAATCCTGAATTCACCAAGTAATAGCCAACCCAGTTTGCTACTGAAAGAAGCCATAGATAATGTAAAGTTGAATACTAGAAGACTGGTTCGTCGTCAGAGGAGGCAGCTAAAGAGACTGGAGACTTTGTTTGGATGGAAGATCCACTATGTTGATTCCACGGAATATATAACATGCAAAGTGGAGGATTCATGGACTGCACAAGTCGTTGAACCTGCAGTCCAGATAATTAGGTCTTTCCTTAAAGATGGTTCGGGGACTGAAACAATAAACCCGCATAGTTCAGGGCAAACAATCAAGAAGGACGTGTGGACACAATATATATGCCAGGCTTGTGGGAATAAAGTACTAAGAGGAGCACATGAGTGGGAACAACACAATCAAGGTCGCACACATCGAAAACGAATTTATCGGCTTAAGAAGAAGTGTGAAGGGCCTTCCTTGCTGCAACAGAAACTACCTCTTCAAGAATAA 1962 42.86 MLNKATEKGVKGLFSEDANAQGDSNPNPLSKVLFEQVSWDGLVSNGDVAQVKVPKAVDGVADTKVMNKTGFENQKAPPFDRGYSSGLAIGSCSYSYLMVSTVGNMSQVSPLSLVSYPPSELGLLESEAGVIPSNLLFSFPCNVGGGDGRWLVFDPLVHAASYRSRGDGMLLTNGGVLGAPLATPSSLDSQTSRSSIGIENPGWAALPLVGIKQLKVKGEDSFLILNHMVEFFEAMSDLKINRSKCQILGINSDLEKIERWVEMFGCEVIDDIISRGCLPMIVGGTNYYIQALVSPFLLDDSAENVGGSCSIYPGDEELGIELNEGRDGLKYDHNHLKEIDPVSANRIHPNNHRKINQYLSLYYRTGVLPSTLFQGTANEVWIFFPLSYVTMEWQNWGQADSFRYDCCLICVDASVPQLDGHVDSRVDSMMAAGLLDEVYDIYNPNANYTKGVRQAIGVREFEEFLRYYVPKGRCEKDSAGLSPKKIMECNEIENIRSILNSPSNSQPSLLLKEAIDNVKLNTRRLVRRQRRQLKRLETLFGWKIHYVDSTEYITCKVEDSWTAQVVEPAVQIIRSFLKDGSGTETINPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRIYRLKKKCEGPSLLQQKLPLQE 653
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 23973215 23989430 + CmPI595203_01g012210.1 Cmu01g1221 406727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1221 653 Gene3D - 316 376 - -
Cmu01g1221 653 FunFam tRNA dimethylallyltransferase 598 640 - -
Cmu01g1221 653 Gene3D - 225 601 IPR027417 -
Cmu01g1221 653 Pfam IPP transferase 266 534 - -
Cmu01g1221 653 Gene3D Classic Zinc Finger 602 641 - -
Cmu01g1221 653 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 267 588 IPR039657 GO:0005739(PANTHER)|GO:0006400(PANTHER)|GO:0052381(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1221 Cmu-Chr1:23973215 Cmu07g0084 Cmu-Chr7:722711 5.90E-21 dispersed
Cmu01g1221 Cmu-Chr1:23973215 Cmu06g0568 Cmu-Chr6:6301912 2.00E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1221 K00791 - csv:101202758 643.654