Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1274 ATGCCAACCGCGAGCGGAGGGGCCATGGCCCTTTTTGATGAAAAGCCGAAAGGTTTTTCCACCCACAATATTAGTACCACTCAACCACCTTCGCCCATTATAAAAAAGGAAAAGGGGGGGAAATCCATTCACGAACCTTCTTGTTCACAAAATATTCCACTCAAAATGGAGGAAACATTTTTTCCGTTTCGTGGGATTAAGAATGATATAAAAGGAAGACTTCTGTGCTACAGACAGGATTGGACTGGAGGCTTTCGCGCTGGTATCAGGATCTTGGCCCCAACAACGTATATATTCTTTGCTTCAGCAATTCCGGTTATATCGTTTGGGGAGCAGCTAGAAAGGAATACATACGGGACTCTAACTGCCGTACAAACTCTAGCATCAACAGCACTTTGTGGCATTATCCACTCAGTCTTTGGGGGACAGCCTCTGCTTATCCTTGGTGTTGCTGAACCAACTGTTTTGATGTATACGTTCATGTTCGACTTTGCAAAGGACCGAAAGGAACTGGGACAGGAACTATTCTTAGCCTGGACAGGATGGGTATGTGTATGGACAGGCATCTTGCTTTTCTTGCTTGCGGTGTTGGGTGCATGCTCCCTGATCAATAGGTTCACACGTCTTGCTGGTGAATTGTTTGGTCTGCTAATTGCCATGCTCTTCATGCAGCAGGCAATACGTGGTGTTGTGGAGGAATTCGGCATACCCCAAAGGGAAAATCCTAATCAGGTGGCGCTCCAACCTCCTTGGCGCTTTGGCAATGGAATGTTTGCATTAGTGCTGTCCTTCGGGCTTCTGCTAACTGCCCTTAAAAGCCGCAAAGCTAGATCATGGCGCTATGGGACTGGTTGCCTACGTGGCCTTATTGCTGATTATGGAGTTCCACTTATGGTGCTCGTATGGACAGCCTTATCTTACATTCCAGTCAACAATGTCCCACTTGGGATCCCAAGAAGGCTTTTCAGTCCCAATCCATGGTCTCAGGGTGCCTACTCAAATTGGACGGTTATAAAGGAAATGTTGAGAGTGCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACCATGATAGCAGTTCTTTACTACTTTGATCACAGTGTTGCATCTCAGCTTGCCCAACAGAAAGAGTTTAATTTGAAAAAACCAGCTTCATATCATTATGATCTTCTCCTCCTAGGTTTCCTTGTTATCCTGTGTGGACTTATAGGCATACCACCTTCTAATGGTGTAATTCCTCAGTCTCCGATGCACACAAAAAGCTTAGCTACCCTAAAACATCAGCTTTTGCGGAGCAAGCTGGTAGCAGCAGCGCGACAAAGTTTCCGTAAAAATTCGAACTTGAGTCAATTATACCGGAACATGCAAGAGGCATATAATGAGATTCAGACTCCTTTAATTTATCAAAATCCACCAGCTGTGGGGCTGAAGGAGTTGAAGGATTCCACGATCCAACTAGCTTCAAGAACTGGCTACATTGATGCACCTGTTGATGAAACTGTTTTCGATGTGGACAAAGATATTGATGATCTTCTGCCAGTAGAAGTTAAAGAACAACGTCTCAGCAATTTGCTTCAGGCAGTAATGGTTGGTGGTTGTGTTGCTGCTATGCCTCTTTTAAAGAAGATCCCGACTTCGGTTCTTTGGGGCTACTTCGCTTTCATGGCAATCGAGAGCTTACCCGGAAATCAATTTTGGGAAAGGATTTTACTTCTTTTCACTGCTCCGAACCGAAGATACAAGGTGCTGGAGGAATATCATGCAACCTTTCTAGAAACTGTCCCCTTCAAAACAATTGCCACCTTCACCTTGTTTCAGACAGTATATCTGCTGATGTGTTTTGGATTAACCTGGATTCCAATTGCTGGTGTTCTTTTTCCGCTGTTGATCATGCTTCTCGTCCCTGTGCGCCAGTACTTGCTCCCCAAGTTCTTCAAAGGTGCTCATCTTCAGGACTTGGATGCTGCTGAATATGAGGAAGCTCCTGCAGTCACTTTTAATCCGTCATTCGAAGATCGAATGGGAAGAACTCCCAACATTGATGACGGTGAAATACTCGACGAGATGATCACAAGAAGCCGTGGCGAGATTCGACGTACACAAGGTTCAAAAGTGATAAGCTCATCCCCAACGTCTCTAGAGGGCATCAAACCTGCCTACAGCCCACAGATACCACAGAAACTTTACAGTCCACGGATCAATGAGCTGAGAAGAGAGAGAAGTTCTCTATCTCCTGGAAAAGGACTTGAGTTTAAGCTAAATTCTAGTCCTAGTCCTAGTGAAGAACCAGGGCCAGGACCTTCTTTTAGAAATTAG 2319 44.98 MPTASGGAMALFDEKPKGFSTHNISTTQPPSPIIKKEKGGKSIHEPSCSQNIPLKMEETFFPFRGIKNDIKGRLLCYRQDWTGGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTALCGIIHSVFGGQPLLILGVAEPTVLMYTFMFDFAKDRKELGQELFLAWTGWVCVWTGILLFLLAVLGACSLINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFGIPQRENPNQVALQPPWRFGNGMFALVLSFGLLLTALKSRKARSWRYGTGCLRGLIADYGVPLMVLVWTALSYIPVNNVPLGIPRRLFSPNPWSQGAYSNWTVIKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRSKLVAAARQSFRKNSNLSQLYRNMQEAYNEIQTPLIYQNPPAVGLKELKDSTIQLASRTGYIDAPVDETVFDVDKDIDDLLPVEVKEQRLSNLLQAVMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPKFFKGAHLQDLDAAEYEEAPAVTFNPSFEDRMGRTPNIDDGEILDEMITRSRGEIRRTQGSKVISSSPTSLEGIKPAYSPQIPQKLYSPRINELRRERSSLSPGKGLEFKLNSSPSPSEEPGPGPSFRN 772
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 25345869 25356607 + CmPI595203_01g012740.1 Cmu01g1274 406780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1274 772 FunFam probable boron transporter 2 73 115 - -
Cmu01g1274 772 PANTHER ANION EXCHANGE PROTEIN 26 693 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cmu01g1274 772 Gene3D Helical hairpin bin 73 115 - -
Cmu01g1274 772 MobiDBLite consensus disorder prediction 701 717 - -
Cmu01g1274 772 Pfam HCO3- transporter integral membrane domain 62 235 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cmu01g1274 772 Pfam HCO3- transporter integral membrane domain 257 427 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cmu01g1274 772 Pfam HCO3- transporter integral membrane domain 515 657 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cmu01g1274 772 MobiDBLite consensus disorder prediction 698 772 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1274 Cmu-Chr1:25345869 Cmu10g1945 Cmu-Chr10:24995149 0.00E+00 dispersed
Cmu01g1274 Cmu-Chr1:25345869 Cmu07g1265 Cmu-Chr7:27922302 1.40E-218 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1274 K24194 - csv:101203606 1378.23