Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1662 ATGGAAAATTACTCTTTGCTTTGCCTTTTTCTCTCTCTTATCTCTCTCATCTTCGCTTTCAATCTCCGCCGTCGCAGAAACTTACCGCCCAGTCCGCTGTCTCTTCCCATCATCGGCCACCTCCATTACCTCAAAATCCCCGTCCACCGAACTTTCCAGAACCTCTCTGCAAAATACGGACCAGTAATCTCTCTTTGGTTCGGATCTCGCCTCGTCGTCGTCGTCTCGTCATTGGACGTGATGGAGGAGTGCTTCACTAAGAACGACATCGTTTTAGCCAACCGTCCTCGGTTGCTAGTCGGCAAATACATCGGCTACAACCACACTACGATGGTAGCGTCACCGTACGGCGAACACTGGAGGAACCTCCGCCGAATTGGAGCTATCGAGATCTTTTCGGCATCTCGCCTCAATAAATTAGCTGGAATCCGAAAGGACGAAGTGGAACGGTTACTGAGGAAGCTATCGAGGAATTCGTTGAATGGATTCTCGAAGGTACATATGCAATCGGCGATTTCGGAACTGACGTTCAACATATCGATGAGAATGGCGGCCGGAAAGAGGTATTTCGGTGAGGAAGTGACGGATGAAGAGGAAGCGAGACAGTTCAGAGATTTGATTAAACAGGTGGTGGCGTTGGGAGGAGTTTCGAATCCAGGAGATTTCATTCCGATGATAAATTGGATTCCGAACGGGTTCAAGAGGAAGGTTTCGGGACTTGCAAAGAGGACGGACGCGTTTTTGCAGGGATTGATCGAGGAACATCGGAGCAAGAAGGAAGAAGGAAGGAACACGATGATCGATCATTTGCTCTCTCTGCAAGAATCAGAGCCGGAGAACTATGGAGATCAAATTATCAAAGGAATTATTCTGGTTTTGTTACTAGCAGGAACGGACACATCAGCTGTGACAATTGAATGGGCTCTAGCTCACTTACTCAACAACCCAGAGGTACTCAAAAAGGCTAGAGAAGAGCTAGACGCTCAAATCGGAGAAGATCGACTAGTGGAAGAATCAGACGTCCCCAAGTTACCATATCTTCAAGGAATCATCTCTGAGACTCTTCGGTTGAACCCAGCTGCTCCGATGCTAGTGCCACATCTCACCTCCGACGATTGCACAATCAGCGGCTACGACATACCACGTGACACAATTGTATTGGTTAATGCATGGGCCATCCACAGAGATCCTAATCTATGGGAAGAACCCACACTATTCAAACCAGAAAGACACCAAAAGTCATCAGAACTAGGTGAACATCAGGTCCACAAGTTGGTTCCATTTGGAGTTGGACGTCGAGCTTGCCCTGGGTCCGGCATGGCTCAACGAGTGGTGGGGTTGGCTCTAGCGGCCCTGATTCAGTGCTACGAATGGCAGAGGATTGGCGAAGAGAAAATAGACATGACGGAGGGACGAGGCGTCACTATGCCCAAGGCAGTGCCATTGGAAGTCATGTGCAAACCTCGTCGTATCATCCACAACCTTTTTAACTGA 1494 48.66 MENYSLLCLFLSLISLIFAFNLRRRRNLPPSPLSLPIIGHLHYLKIPVHRTFQNLSAKYGPVISLWFGSRLVVVVSSLDVMEECFTKNDIVLANRPRLLVGKYIGYNHTTMVASPYGEHWRNLRRIGAIEIFSASRLNKLAGIRKDEVERLLRKLSRNSLNGFSKVHMQSAISELTFNISMRMAAGKRYFGEEVTDEEEARQFRDLIKQVVALGGVSNPGDFIPMINWIPNGFKRKVSGLAKRTDAFLQGLIEEHRSKKEEGRNTMIDHLLSLQESEPENYGDQIIKGIILVLLLAGTDTSAVTIEWALAHLLNNPEVLKKAREELDAQIGEDRLVEESDVPKLPYLQGIISETLRLNPAAPMLVPHLTSDDCTISGYDIPRDTIVLVNAWAIHRDPNLWEEPTLFKPERHQKSSELGEHQVHKLVPFGVGRRACPGSGMAQRVVGLALAALIQCYEWQRIGEEKIDMTEGRGVTMPKAVPLEVMCKPRRIIHNLFN 497
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30379301 30382580 - CmPI595203_01g016620.1 Cmu01g1662 407168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1662 497 Pfam Cytochrome P450 29 478 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 CDD CYP81 60 482 - -
Cmu01g1662 497 FunFam Cytochrome P450 family protein 20 492 - -
Cmu01g1662 497 Gene3D Cytochrome P450 19 493 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cmu01g1662 497 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS E-class P450 group I signature 56 75 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS E-class P450 group I signature 80 101 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu01g1662 497 PANTHER CYTOCHROME P450 82C3-RELATED 14 489 IPR050651 -
Cmu01g1662 497 SUPERFAMILY Cytochrome P450 29 489 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1662 Cmu-Chr1:30379301 Cmu02g0840 Cmu-Chr2:9981706 1.50E-170 dispersed
Cmu05g2004 Cmu-Chr5:29775779 Cmu01g1662 Cmu-Chr1:30379301 4.60E-56 dispersed
Cmu10g2468 Cmu-Chr10:31291283 Cmu01g1662 Cmu-Chr1:30379301 4.20E-83 dispersed
Cmu11g0792 Cmu-Chr11:8702088 Cmu01g1662 Cmu-Chr1:30379301 4.00E-15 dispersed
Cmu01g1662 Cmu-Chr1:30379301 Cmu01g1666 Cmu-Chr1:30392562 1.60E-212 proximal
Cmu01g1662 Cmu-Chr1:30379301 Cmu05g2095 Cmu-Chr5:30540677 2.80E-92 wgd
Cmu01g1662 Cmu-Chr1:30379301 Cmu08g1569 Cmu-Chr8:27450985 3.70E-132 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1662 K13260 - csv:101211829 814.298