Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1664 ATGAGGGAAATGGGAACAAGGAAAAACTTCCGATATTTCTTGGTGCATTTTGGCGAAAGTGGGTTTATTACTGTCAGTGTTAGTCCTCTGGATAACCCAGATTCTGGACAGTCCTCTGCTTTTTTGAATGGGGTTGAGATTATGGAAGCCATGGATGAACATAGCAAAGATCCTGTCATCAAGGAAAGGAAGAACAAACATGTGGGTGTTTTTGTGGGCTTGGCTGTTGGTGGTTTTGGTTTGATCTGCATTTTAGGCTTTGGGATATTTTTTGGTCTCAAATGGAGTAAGCCAAAAACCGAGGAAGCTTCACAAACACACACAAAGTGGTCTCCATGGCCTTTATTTGGAGGTCGGAGCACTCACAGCAACTCAACCAGCTCTCCCATCCCCAACTTGAATCTTGGGTTGAAGTTCTCTCTTGCTGAAATCAAAACTGCCACAGACAATTTCAATAAGAAATTCCTTGTTGGTGAGGGTGGTTTTGGGAAAGTTTATAAGGGAGTTATGAGAAATGGCATGAGAGTAGCAGTCAAGAGAAGCCAACCAGGGGCTGGACAAGGTATTTCTGAGTTCGAGAGAGAAATCACGATATTGTCGCGAATTCAACATCGGCACCTCGTTTCGTTTATCGGGTATTGCAATGAGGGACTGGAGATGATTTTGGTTTATGAATTCTTGGAGAAAGGAACTCTTAGGGAGCATCTTTACAACTCAAACTTTCCTCCTCTGTCTTGGAAGAAAAGGCTAGAAATTTGCATTGATGCAGCTAAAGGCTTGCATTACCTACACAAAGGCTTATCCATGGGAATCATTCACCGTGATGTAAAATCAACCAACATTTTGCTTGATGAGAACCTTGTCGCTAAAGTTTCCGACTTTGGCCTTTCAACAGCAAGTTCCCTCGACGAAACTCATGTAAGCACAGATATTAAAGGGACTATCGGGTATCTCGATCCCGAGTATTTTCGAACCCGACAATTGACACAGAAATCTGAGTCTACTCATTTGGGGTACTTCTTCTTGAGATTTTGTGTGCAAGACTAG 1047 42.69 MREMGTRKNFRYFLVHFGESGFITVSVSPLDNPDSGQSSAFLNGVEIMEAMDEHSKDPVIKERKNKHVGVFVGLAVGGFGLICILGFGIFFGLKWSKPKTEEASQTHTKWSPWPLFGGRSTHSNSTSSPIPNLNLGLKFSLAEIKTATDNFNKKFLVGEGGFGKVYKGVMRNGMRVAVKRSQPGAGQGISEFEREITILSRIQHRHLVSFIGYCNEGLEMILVYEFLEKGTLREHLYNSNFPPLSWKKRLEICIDAAKGLHYLHKGLSMGIIHRDVKSTNILLDENLVAKVSDFGLSTASSLDETHVSTDIKGTIGYLDPEYFRTRQLTQKSESTHLGYFFLRFCVQD 348
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30390006 30391398 - CmPI595203_01g016640.1 Cmu01g1664 407170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1664 348 ProSitePatterns Protein kinases ATP-binding region signature. 157 179 IPR017441 GO:0005524(InterPro)
Cmu01g1664 348 Gene3D Phosphorylase Kinase; domain 1 118 226 - -
Cmu01g1664 348 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu01g1664 348 ProSiteProfiles Protein kinase domain profile. 151 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu01g1664 348 SMART serkin_6 151 348 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu01g1664 348 Pfam Protein tyrosine and serine/threonine kinase 157 333 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cmu01g1664 348 PANTHER OS01G0750732 PROTEIN 58 333 IPR050885 -
Cmu01g1664 348 SUPERFAMILY Protein kinase-like (PK-like) 125 332 IPR011009 -
Cmu01g1664 348 Gene3D Transferase(Phosphotransferase) domain 1 227 346 - -
Cmu01g1664 348 FunFam receptor-like protein kinase FERONIA 118 226 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1664 Cmu-Chr1:30390006 Cmu11g1333 Cmu-Chr11:25552158 2.20E-147 dispersed
Cmu01g1664 Cmu-Chr1:30390006 Cmu05g0937 Cmu-Chr5:8568841 1.80E-85 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75226 PF07714 PK_Tyr_Ser-Thr 1.20E-38 CL0016 Cmu PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1664 - - - 0.0