Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1692 ATGATGCAATTCAGCGAGACACCCCCACGGTTGCACCAAACGACCACTACTACAACAAGGATTATTCCTCCTTCATTTCCAGAGATGTCGATGAATAATAAAAACCAAATTACAACAACGGGGCAGTTTCGAAGTAGGCGGCCATGGCCTGGTTTATTTCCTTGCTCATCCAAAGCTTTAGGGACTTGCTTGGGAGATGCCAATTGTATGGAACAATTGTTAGTTCATTGTGCCAACGCCATTGAAACCAACGACGCTACTCTCGCCCAACAAATCCTTTGGGTTCTTAACAACATTGCCCCTCCTGATGGCGATTACAACCAACGCCTCACTTCCGCTTTCCTACGCGCTCTCGTCACACGCGCCACCAACACCGGTAACTGCAAGATCCTAGCCGCTATCACCACCGCATTCTCCTCCTCACTCACCACACACACCTTCTCCCTTATGGACCTCGCCGCCTTCGTCGACTTAACCCCCTGGCACCGCTTCGGCTTCACCGCCGCCAATGTCGCCATTCTCGACGCCATCGAGGGTTACTCCGTCGTACATGTCGTGGATTTCAGCTTGATGCATTGCATGCAAATCCCTACTTTAATCGACGCCATTGCTACACGATTTGAGGTTCCTCCGTTGTTGAAACTCACGACTGTAGCTGTTGTTGCCGTTAAAGACGCATCGCCTATGCTGGAGCTTTCGTACGACGAATTAGGTGCGAAATTAGTGAACTTCGCCAGGTCTAAAAACGTGACTATGGAATTTAGAGTGGTCCCGTCTTGTCATACAGACGGTTTCGCCAGTTTAATTGAACAAATCCGAATGCAAAACTTAATTTACGGACCTGAAAATAACGAAGCACTCGTTTTTAATTGTCACATGATGCTTCATTACATCCCTGAAGAAACATTAAACCCAAACCCATCTCCCAATTTCGACATGTCGTCCACTTCAATTCGTTCCATGTTTCTCAAGGCAATCCGTAGTTTAGACCCAACGATTGTGGTTTTAGTAGACGAAGATGCGGATTTCACTTCAAGCAAATTGGTTACACGATTGAGATCGGCGTTTAATTACCTATGGATTCCTTACGACTCCATGGATTCGTTTCTTCCGAGAAGCAGCAAGCAGAGGGAATGGTATGAAGCCGACATTTGTTGGAAGATTGAGAATGTAATTGCACAGGAAGGGATTCAACGAGTTCAAAGATTGGAACCGAAGGGACGGTGGGTTCAACGGATGGTGAACGCCAAATTCCGAGGGGTTCCGTTTGGAGAGGACGCCGTTACGGAGGTGAAGGGGATGCTTGACGAGCATGCAGGGGGATGGGGGTTGAAGAAAGAAGAGGACCACCTGCTGCTCACGTGGAAAGGGCACGACGTCGTTTTCGCTACTGCTTGGGTACCTTGCTAA 1410 48.16 MMQFSETPPRLHQTTTTTTRIIPPSFPEMSMNNKNQITTTGQFRSRRPWPGLFPCSSKALGTCLGDANCMEQLLVHCANAIETNDATLAQQILWVLNNIAPPDGDYNQRLTSAFLRALVTRATNTGNCKILAAITTAFSSSLTTHTFSLMDLAAFVDLTPWHRFGFTAANVAILDAIEGYSVVHVVDFSLMHCMQIPTLIDAIATRFEVPPLLKLTTVAVVAVKDASPMLELSYDELGAKLVNFARSKNVTMEFRVVPSCHTDGFASLIEQIRMQNLIYGPENNEALVFNCHMMLHYIPEETLNPNPSPNFDMSSTSIRSMFLKAIRSLDPTIVVLVDEDADFTSSKLVTRLRSAFNYLWIPYDSMDSFLPRSSKQREWYEADICWKIENVIAQEGIQRVQRLEPKGRWVQRMVNAKFRGVPFGEDAVTEVKGMLDEHAGGWGLKKEEDHLLLTWKGHDVVFATAWVPC 469
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30645553 30646962 - CmPI595203_01g016920.1 Cmu01g1692 407198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1692 469 Pfam GRAS domain family 70 466 IPR005202 -
Cmu01g1692 469 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 66 466 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Cmu01g1692 469 ProSiteProfiles GRAS family profile. 61 467 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1692 Cmu-Chr1:30645553 Cmu02g0161 Cmu-Chr2:1595060 1.20E-95 dispersed
Cmu01g1692 Cmu-Chr1:30645553 Cmu03g0756 Cmu-Chr3:1730486 4.10E-32 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5550 PF03514 GRAS 3.00E-90 CL0063 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1692 - - - 0.0