Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1693 ATGAGTTGCAACGGTTGCCGTGTTCTTCGTAAGGGCTGCAGCGAATCCTGTATTCTTCGCCCTTGTTTGCAGTGGATTGACACCGCCGAAGCTCAAGGTCACGCTACTGTCTTCGTCGCTAAGTTCTTCGGCCGCGCCGGCCTCATGTCCTTCATCTCCGCCGTCCCTGAATCTCAGCGACCTTCTTTGTTTCAGTCTTTGTTGTTCGAAGCCTGCGGACGCACCGTCAATCCCGTCAACGGCGCCGTTGGTCTTCTCTGGACTGGCAACTGGCACGTTTGTCAGGCCGCCGTCGACACCGTCCTACGAGGCGGCACTTTGCGGCCAATCAATGATTTCCTTGCTGCTGGATCCCCCAATCTAGCCTCCGACGACACTTCCGAGGCTGAAGTAGGCTGTACCGACATGTGGAAGATACGAGATTCTTATCCCAATTCTCGATTCTCCAACTCTCGATCCAGGCTCTCACCAAAACGCAAACGATCCGAGGAATCATCTCCCAAACACCAACTGAATGATCTAGATCTCCGCTTGACGCCTACTTTTCCAGCCAAATCAACCCTGCGCGCGGCTACTCCATCCATGAATTCCGAGGAATCCGAGACCACAACGTGCTTCGAGAGCGGCCTTGGGGATAATCATCATCAACATCAATACTATCCAGAAGAAGGAACTACCCAACGGAAACTTCTCAATTTGTTCGTCTAA 708 52.82 MSCNGCRVLRKGCSESCILRPCLQWIDTAEAQGHATVFVAKFFGRAGLMSFISAVPESQRPSLFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVDTVLRGGTLRPINDFLAAGSPNLASDDTSEAEVGCTDMWKIRDSYPNSRFSNSRSRLSPKRKRSEESSPKHQLNDLDLRLTPTFPAKSTLRAATPSMNSEESETTTCFESGLGDNHHQHQYYPEEGTTQRKLLNLFV 235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30663968 30664767 - CmPI595203_01g016930.1 Cmu01g1693 407199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1693 235 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 234 - GO:0010468(PANTHER)
Cmu01g1693 235 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Cmu01g1693 235 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Cmu01g1693 235 MobiDBLite consensus disorder prediction 156 171 - -
Cmu01g1693 235 MobiDBLite consensus disorder prediction 146 218 - -
Cmu01g1693 235 MobiDBLite consensus disorder prediction 185 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1693 Cmu-Chr1:30663968 Cmu05g2111 Cmu-Chr5:30632392 6.70E-52 dispersed
Cmu01g1693 Cmu-Chr1:30663968 Cmu06g1539 Cmu-Chr6:26649842 3.10E-41 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5551 PF03195 LOB 4.00E-25 No_clan Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1693 - - - 0.0