Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1866 ATGGCGGGTATTCTTAGCGCTTTGAGAGTTCTAATGGCGTCCCATACTCCTCCTCTTGACGCCTTGGTTGTTCCTTCTGAGGACTATCACCAGAGTGAATATGTATCTGCGAGAGATAAACGACGTGAATTTGTGTCAGGTTTCACCGGAAGTGCTGGTCTGGCCCTTGTAACTCAGAGAGAAGCATTACTGTGGACCGATGGGCGGTATTTCCTGCAGGCAATTCAACAGCTTAGTGATCAGTGGAAACTTATGCGAATGGGAGAGGATCCTTCTGTAGATCTCTGGATGGCTGAGAATCTTCCAGCAGATGCAGCTGTTGGAGTGGATCCTTGGTGTGTGTCAGTGGACACAGCACAAAAATGGATTCACGCATTTTCCAAGAAGCAGCAGAAGCTGGTTCAAACCACCCCGAACTTAGTTGATGAAGTTTGGAAGAACCGACCACCACCAGAAATAAATCCTGTTATGATACACCCACTGGAATATACTGGCCGCTCTGTTGAAGATAAGTTGAAGACTTTGAGAACAAGGCTTTTGCAGGAGAAAGCTCATGGTTTAATTGTGACTGGACTTGATGAAGTAGCTTGGTTGTACAACATCCGTGGGAGTGATGTGTCATACTGTCCAGTTGTACATGCATTTGCAATAGTGACACTCAATTCAGCGTTCTTTTATGTGGACAAGAGGAAGGTGTCTGATGAGGTGCGCTTGTACATGGAGCAAAATGGAATTGAAGTTCGGGATTATAGTGCAGTAATAACAGATGTGTCCTTACTTGCATCTAATCAACTTAACTTGTCATCTTTTGTGAAAGGACCTGAAGTTAGGGCTAATATGGAAGTAGAACTCAGTTCGATTGACATAGCAGGATCTAATGGAACTAAAGTAGAAAGCCAGAGTTCTGGCCTCATATGGCTTGATCCTGCCCAATGCTGCTATGTTTTGTATTCTAAACTGAACTCTGATAAGGTTCTCCTGCAACAGTCGCCATTGGCCCTTGCGAAAGCTCTAAAGAACTCTGTTGAGTTGGACGGACTAAAGAAGGCACACATTCGGGATGGTGCAGCTGTTGTACAATATCTTGTGTGGTTGGACAAGCAGCTGCAAGACATTTATGGTGCTGCTGGTTACTTTCGGGAAGGGGATGGAGTGAGGAAGCCCAAACCGTCGGACTCAAAGAAACTAACAGAAGTTAGTGTAAGCGATAAGCTTGAGGCTTTCCGAGCATCAAAGGAGCATTTTAGAGGCCTAAGTTTCCCTACTATTTCATCTGTTGGTTCAAATGCTGCAATTATTCATTATGGACCACAAGCAGAGACATGTGCTGAGTTGGATCCTGAAAGCATCTATCTTTTTGACTCGGGAGCTCAGTATTTGGACGGAACAACCGATATCACGCGGACAGTCCATTTTGGATTACCTTCAGCACATGAGAAAGCTTGTTATACTGCAGTTCTCAAAGGCCATATTGCTTTGGGAAATGCAAGATTTCCAAATGGCACAAATGGCCACTCATTGGACATTCTTGCTCGAGTTCCCTTGTGGAAGGATGGTCTGGATTATCGACATGGCACTGGCCATGGAATTGGTTCTTTCCTTAATGTTCATGAAGGACCCCATTTAATTAGTTTCAGACCACAGGCTCGAAATGTTCCTCTTCAAGCTTCAATGACTGTTACGGATGAGCCTGGCTATTACGAGGATGGTGCCTTCGGTATTAGGTTGGAGAATGTACTTGTAGTGAAGGATGCCGATACAAAATTTAATTTTGGCGATAAAGGCTACTTATCATTCGAGCACATAACATGGGCACCATACCAAAGAAAGTTGATCAACACAAGTCTTCTCACATCTGAAGAATTGGATTGGGTGAACACTTACCATTCAGAATGCAGGGATATTCTTGCTCCATATTTGGATGAATCCGAGAAGGAGAGCTCCGAGGAGAAGTCCAGAAAATGCCAAGGGTTGAACTCAATGTATATTTTGCAACATTTTAATTCAACCTATACCTATTACATGAAGCAATCGTTAAACAGTGCTGAGACTCACAATGCTAAAGTGCTTTTTGGGGAAGAGCCACTAGTTATTGCAAGAGGAGGGTTATCTGGAGTGTTTCCAGAATCAAGCCCTTTTGCAAATCAAATGGCTTTGGTTTCAGGTTTACATAACACAGTTTTGTATTGTAATCTTCAACTCACCAAAGATGCGGTAGGCATTTGCTTAACTGATCTCAGGCTTCAAAATTCAACCAATATTGAAGATGTTTTCCCTGGGGAACATAAGTCTTATAATGTTAATGGAAAGATTATCAAAGGATGGTTTTCTGTTGATTACATGTCTAGGACTCTCTTTAACAAACTCTTCATGATTCAAAGTGTCCTCTCTCGTCCTAGTCTCTACGACGGTACTTTGCCAATCGCGGCTGTCGAAGATGTCATGGGGATTAAACCGACTCAGTTTTGGTTGAATGCCGAGCACGAAGCATTCTACGCTGAGCACAATTTGAGTGTATCATTATACCTTCAAAAGGCATTGAGAATGATGGGAATAAACTTTGTGTCATCTTCAGAGATTGGAATATTGAAAGGGATAAGTGGGAGTGTGAACAAAGCTAGAACAAAGCTGGTCTTCAGATTCTTAGAAGCCACTGAAATAGAACCAACAACAAAGAAAACATATGGTGTACTGGCTCAAGAACTTCCCATGATTAAGACATTTGCCTCAGGAATTCTCGTCAGAAAAGAATACATTTGGCCAATTGGTCAAGACAAGTATGTGCAGCCTGCAACAACTCTTGTCATGGATGCTCATAAGCTTGGCTTGGAAGTTTATGCTTCTGGCTTTGCAAATGATGCCATTGTTGGTTACAATTATAGCTATGATCCAATCCGTGAATACCTTCAGTATTTTGATAATGGCCATTTTGCTGTTGATGGGGTCCTTACTGATTTTTCTCCTGCTGCTTCTCAAGCCATTGCCTGCTATTCGACTTTTCGCAACAATGGCAAGCCTCAACCTGGATTAGAGCAAGCATTGGTGATAAGCAGCAATGGGGCAAGTGGGGATTTCCCAGGCTCAACTGACCTTGCTTACCAAAGAGCAATTGATGATGGGGCGGATGTTATTGATTGTTCAGTTCAATTATCAAAAGATGGAGTTCCTTTCTGTATGGATATGGCAGATCTTTTGACAGGTACAACTGTTGTCACTTCTTTCTCAGCTCGAACTACAACTATCCCCGAAGTTCAATCTGAAGCTGGAATCTTCTCTTTTGATCTTACTTGGGCGGAGATTTTGACTCTCAAACCTCAAATTACAAACCCTTTCATGGCTTCTTCTGGCCTTGCTCGTAATCCAGCCTTTAAAAACAAGGGCAAGTTCATGACTCTCCCTGAGTTTCTAGAGTTTGCTAAAGCCAAAGCTGTTTCTGGGATTATGATCAACATCCAAAACGCGGCGTATTTGGCTTCAAAGAAAGGTCTAGACATGGTGGGAACTGTCTCCACTGCCTTAATAAATTCCACTTTTGACAAACAATCAACACAACAAGTTTTCATTAGATCAGATGATACTTCTGTGTTGTCTTTTTTCAAGGCAAAGTTCCCAAGTTTCATTAGAGTTTTAACTGTCGACACAAAGATTGGTGATGCCCCAAAAGATGCTCTTGAAGAGATCAAACGCTATGCCGAAGTTGTAGCCATTCCTCGTGGCTCTATCATTGAAATAACAAACTATTTCACTACTGGCCTCACCAAAGTAGTTGCTGAAATTAAGGCTTCAAATCTCTCTGTCTTTGTTTATGTCATGAGAAATGAATATGTTTCCTTGGCCTTTGATTACTACTCTGAAGCCTCCACGGAAATCGCTACCTTTGTCGACTACTTCCACGTTGATGGCATCATTACCGAATTCCCCAATACTGCTAAACGATACATGACATGTCCGTGCCGACCGACTCAGCTGAACCCGAATGGAGCTCCATATATAATTGTACCGCCTGAAATTGGTTTACTCATGGAAATGGTGGCTCCAGAGGCTAAACCACCTACTGATCCTCCATTGCCGCCATTGGATGCTGATAATGTCATTGATCCACCGCTCCCGGCGGTGGTCAAAATGTCAGCCAGCAATCCTTCAGGTGTTGCCGATGGGCCTGCCGCAGCCACCCCATCAGCCGCTGTATCAAATGTTGCTAACTTGTTTCTTTCTTTACTATCAGTTGTGGTGCTTAACTTCTTCATTTCACACTTCTGCATTGTAATAATCAATACTCATTAA 4284 42.81 MAGILSALRVLMASHTPPLDALVVPSEDYHQSEYVSARDKRREFVSGFTGSAGLALVTQREALLWTDGRYFLQAIQQLSDQWKLMRMGEDPSVDLWMAENLPADAAVGVDPWCVSVDTAQKWIHAFSKKQQKLVQTTPNLVDEVWKNRPPPEINPVMIHPLEYTGRSVEDKLKTLRTRLLQEKAHGLIVTGLDEVAWLYNIRGSDVSYCPVVHAFAIVTLNSAFFYVDKRKVSDEVRLYMEQNGIEVRDYSAVITDVSLLASNQLNLSSFVKGPEVRANMEVELSSIDIAGSNGTKVESQSSGLIWLDPAQCCYVLYSKLNSDKVLLQQSPLALAKALKNSVELDGLKKAHIRDGAAVVQYLVWLDKQLQDIYGAAGYFREGDGVRKPKPSDSKKLTEVSVSDKLEAFRASKEHFRGLSFPTISSVGSNAAIIHYGPQAETCAELDPESIYLFDSGAQYLDGTTDITRTVHFGLPSAHEKACYTAVLKGHIALGNARFPNGTNGHSLDILARVPLWKDGLDYRHGTGHGIGSFLNVHEGPHLISFRPQARNVPLQASMTVTDEPGYYEDGAFGIRLENVLVVKDADTKFNFGDKGYLSFEHITWAPYQRKLINTSLLTSEELDWVNTYHSECRDILAPYLDESEKESSEEKSRKCQGLNSMYILQHFNSTYTYYMKQSLNSAETHNAKVLFGEEPLVIARGGLSGVFPESSPFANQMALVSGLHNTVLYCNLQLTKDAVGICLTDLRLQNSTNIEDVFPGEHKSYNVNGKIIKGWFSVDYMSRTLFNKLFMIQSVLSRPSLYDGTLPIAAVEDVMGIKPTQFWLNAEHEAFYAEHNLSVSLYLQKALRMMGINFVSSSEIGILKGISGSVNKARTKLVFRFLEATEIEPTTKKTYGVLAQELPMIKTFASGILVRKEYIWPIGQDKYVQPATTLVMDAHKLGLEVYASGFANDAIVGYNYSYDPIREYLQYFDNGHFAVDGVLTDFSPAASQAIACYSTFRNNGKPQPGLEQALVISSNGASGDFPGSTDLAYQRAIDDGADVIDCSVQLSKDGVPFCMDMADLLTGTTVVTSFSARTTTIPEVQSEAGIFSFDLTWAEILTLKPQITNPFMASSGLARNPAFKNKGKFMTLPEFLEFAKAKAVSGIMINIQNAAYLASKKGLDMVGTVSTALINSTFDKQSTQQVFIRSDDTSVLSFFKAKFPSFIRVLTVDTKIGDAPKDALEEIKRYAEVVAIPRGSIIEITNYFTTGLTKVVAEIKASNLSVFVYVMRNEYVSLAFDYYSEASTEIATFVDYFHVDGIITEFPNTAKRYMTCPCRPTQLNPNGAPYIIVPPEIGLLMEMVAPEAKPPTDPPLPPLDADNVIDPPLPAVVKMSASNPSGVADGPAAATPSAAVSNVANLFLSLLSVVVLNFFISHFCIVIINTH 1427
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32235186 32249121 - CmPI595203_01g018660.1 Cmu01g1866 407372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1866 1427 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 1011 1314 - -
Cmu01g1866 1427 Pfam Metallopeptidase family M24 348 583 IPR000994 -
Cmu01g1866 1427 FunFam Probable Xaa-Pro aminopeptidase P 146 335 - -
Cmu01g1866 1427 SUPERFAMILY PLC-like phosphodiesterases 694 992 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu01g1866 1427 SUPERFAMILY Creatinase/aminopeptidase 340 621 IPR036005 -
Cmu01g1866 1427 Pfam Creatinase/Prolidase N-terminal domain 147 343 - -
Cmu01g1866 1427 Gene3D Creatinase/methionine aminopeptidase superfamily 337 659 IPR036005 -
Cmu01g1866 1427 Gene3D - 146 335 IPR029149 -
Cmu01g1866 1427 PANTHER XAA-PRO AMINOPEPTIDASE 1 4 646 IPR050422 -
Cmu01g1866 1427 Pfam Glycerophosphoryl diester phosphodiesterase family 1020 1309 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu01g1866 1427 CDD GDPD_SHV3_repeat_2 1013 1313 - -
Cmu01g1866 1427 ProSitePatterns Aminopeptidase P and proline dipeptidase signature. 524 536 IPR001131 -
Cmu01g1866 1427 CDD GDPD_SHV3_repeat_1 695 993 - -
Cmu01g1866 1427 SUPERFAMILY Creatinase/prolidase N-terminal domain 41 129 IPR029149 -
Cmu01g1866 1427 SUPERFAMILY PLC-like phosphodiesterases 1014 1314 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu01g1866 1427 Gene3D - 2 145 IPR029149 -
Cmu01g1866 1427 Pfam Creatinase/Prolidase N-terminal domain 6 138 IPR000587 -
Cmu01g1866 1427 ProSiteProfiles GP-PDE domain profile. 1013 1314 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu01g1866 1427 CDD APP 346 592 IPR033740 GO:0070006(InterPro)
Cmu01g1866 1427 Gene3D Phosphatidylinositol (PI) phosphodiesterase 693 994 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu01g1866 1427 Gene3D Phosphatidylinositol (PI) phosphodiesterase 1012 1315 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu01g1866 1427 ProSiteProfiles GP-PDE domain profile. 695 994 IPR030395 GO:0006629(InterPro)|GO:0008081(InterPro)
Cmu01g1866 1427 FunFam Xaa-Pro aminopeptidase P 337 657 - -
Cmu01g1866 1427 Pfam C-terminal region of peptidase_M24 596 645 IPR032416 -
Cmu01g1866 1427 FunFam Xaa-pro aminopeptidase P 1 145 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1866 Cmu-Chr1:32235186 Cmu09g2000 Cmu-Chr9:36081506 1.50E-157 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1866 K01262 - csv:101216172 1224.92