Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g1930 ATGGCCAAGCTTGTGAGCTTTGTTTTTGTTCTTTCCCTTCTTGCCTTTGCTCCACTCTGTTTCTGTGGCAGAAATAATGGTGGCTTTGGGTCTCTGTACCCTCAATATTATGACCATTCATGCCCCAAAGCTAAGGAAATAGTGAAATCCATTGTGGCAAAGGCTTTTGCCAGAGAAGCTCGTATTGCTGCTTCCATCCTTAGACTTCATTTCCATGATTGTTTTGTTCAGGGGTGTGATGCATCTCTACTGTTGGATAGCAGTGGAAGCATTAGGAGCGAAAAAAATTCAAACCCAAATAAGAACTCAGCTAGAGGATTTGAAGTGATTGATGAAATCAAATCTGCATTGGAGAAAGAGTGCCCACAAACTGTTTCTTGTGCTGATATCTTGGCTTTGGCTGCAAGAGATTCGACTGTCATTACGGGTGGACCATCTTGGGAGGTTCCATTGGGAAGGAAGGACTCAAGAACTGCGAGTTTGAGTGGCTCCAACAACAACATTCCAGCTCCAAACAATACTTTCCAAACCATTCTCAATAGATTCCAAAACCAAGGGCTTGACATTGTTGATCTTGTTGCCTTATCTGGAAGCCACACCATCGGAAATTCAAGGTGCACCAGCTTCAGGCAAAGGCTATACAACCAAAACGGCAACGGACAACCCGACAAAACCCTTCCGCAGTCGTTCGCGGCGGGGCTCCGTAACCGCTGCCCCAGATCCGGCGGTGACAATAACCTCTTTTTCCTCGACTACGTCAGCCCGACCAAATTCGACAACAGCTACTTCAAGAACTTAGTTGGTTTCAAAGGGCTTCTGAACTCCGACCAAGTTCTCCTCACCGAAAACGATGCGTCGGCCGCTTTGGTAAAGAAATATGCCGACAACAGCGAGCTGTTCTTCGAGCAATTCGCCAAATCTATGATCAAAATGGGTAATATTTCCCCATTGACGGGCTCAAATGGAGAAATTAGAAAGACTTGCAGGAAGATCAACAGTTAA 1002 45.61 MAKLVSFVFVLSLLAFAPLCFCGRNNGGFGSLYPQYYDHSCPKAKEIVKSIVAKAFAREARIAASILRLHFHDCFVQGCDASLLLDSSGSIRSEKNSNPNKNSARGFEVIDEIKSALEKECPQTVSCADILALAARDSTVITGGPSWEVPLGRKDSRTASLSGSNNNIPAPNNTFQTILNRFQNQGLDIVDLVALSGSHTIGNSRCTSFRQRLYNQNGNGQPDKTLPQSFAAGLRNRCPRSGGDNNLFFLDYVSPTKFDNSYFKNLVGFKGLLNSDQVLLTENDASAALVKKYADNSELFFEQFAKSMIKMGNISPLTGSNGEIRKTCRKINS 333
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32674053 32676422 + CmPI595203_01g019300.1 Cmu01g1930 407436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g1930 333 ProSitePatterns Peroxidases active site signature. 63 74 IPR019794 GO:0004601(InterPro)
Cmu01g1930 333 PANTHER PEROXIDASE 72-RELATED 9 331 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 Gene3D - 36 332 - -
Cmu01g1930 333 FunFam Peroxidase 169 311 - -
Cmu01g1930 333 PRINTS Haem peroxidase superfamily signature 63 77 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Haem peroxidase superfamily signature 251 266 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 ProSiteProfiles Plant heme peroxidase family profile. 31 332 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Plant peroxidase signature 249 264 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Plant peroxidase signature 65 85 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Plant peroxidase signature 265 282 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Plant peroxidase signature 41 60 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 PRINTS Plant peroxidase signature 306 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 Gene3D Peroxidase, domain 2 169 312 - -
Cmu01g1930 333 CDD secretory_peroxidase 32 331 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu01g1930 333 ProSitePatterns Peroxidases proximal heme-ligand signature. 191 201 IPR019793 -
Cmu01g1930 333 Pfam Peroxidase 48 296 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 SUPERFAMILY Heme-dependent peroxidases 32 332 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu01g1930 333 FunFam Peroxidase 35 177 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1930 Cmu-Chr1:32674053 Cmu11g0585 Cmu-Chr11:6426450 9.80E-89 dispersed
Cmu10g2762 Cmu-Chr10:34235242 Cmu01g1930 Cmu-Chr1:32674053 1.60E-56 dispersed
Cmu01g1930 Cmu-Chr1:32674053 Cmu07g0876 Cmu-Chr7:22090367 4.50E-150 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g1930 K00430 - csv:101204648 606.29