Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu01g1975 | ATGGAGATGGGGAGCAGTTGGAAATGGAGATGGAGAATGATTTTCATCTTCTCGCAGTTGATAATTACCACAATTTGTCAGCCACCCTTTGTCCAGCACAAGTGTTCCGACGACGTAGGCAACTATACAAACAGCAGCCCTTTCAAGAAAAATCTTGACGCCGTTCTCAACTCTATCTCCACCAATTCTCAGACCGACAAAGGTTTCTATGCGACCGCCGGCGAAGAACCAAACAGAGCCACCGCTATGGTGCTTTGTCGTGGTCCTGTTCCGTTGGAAAATTGTAGAGTTTGTGTGAAAAATTCAACCCAAAGGATTTCTCAAACTTGTCCGAACCAAAAGGAAGCTGCGGGATGGTACCCTGATTGCCAAATTATTTACTCAAACAAATCAATTCAAGGTGTGGTAGACAATTCTACCCCTACTTTTATGTTTTATAACACTATAAAAGCCCCAGACCCGAGTGTGTTTAACCAGGTACTAAGGAGCTTATTGGAAGAAATGCGAGTGCAGCTGGCTGAAACAGGGACTCCAACTCTAAAGTCTGCCAACGGAGTGAAAGAGGTTCCCAATAATGGTCCGAGTCCGAGTGATATCACACACATATATGGGCTGTTTGATTGTTTTTCTGATTTGTCTTTATCCGATTGTGATAGATGCCTCACCCTGCTTCAATCTTATCTTCCTGTTTGTTGTAACGCCAGCATTGGGGCTAGATTAATGGCAGATAGTTGCAAACTCAACTATGAGATCCCCCCCATCTATGCCTCCTTACTTCCAACCACCGTGCCACCACCACCCCCTTTCTATCTCTCTCTCCCTCCTACACAAACTCAAGGAGTTGACAACAATAATTCCGCTAGAAGAATTGTCATAATTGTTGTTTCTTCTACGCTTTCTTTTTCCATGCTCTTCTCCCGTATCCTCCTTATCTTTTTGAGAAAGAGGAAGCGAAACCAAAAGGTCAAGAGGATATTCGAAACAGCCGATCAATCCACAACCACAAATGAAATCCTAAGTATTGAGATGTTGCAATTTGTTTTCGAGACTATTGAGTTAGGAACAAATGAATTCTCAAGTGAAAATAAGATCGGAGAAGGTGGATTTGGAGCCGTTTACAAGGGTAAACTTCCTAATGGACGAGAAATAGCCGTGAAAAGACTTGCAAAAGATTCACAACAGGGAGATGTAGAATTTAGAAACGAAGTATTGTTGGTAGCCAAACTTCATCATAGAAATTTGGTTAGGCTACTTGGATTTTGCTTGCAAAAGAATGAAAGACTTCTCGTATATGAGTTTGTACAGAATGCAAGTCTTGACCACTTCATATTTGATTTTCATAATCGGATCCTTTTAGATTGGGAAACACGATACAAAATTATAAATGGTATTGCACGAGGACTTCTTTATCTTCATGAAGAATCTCGTCTCTTAATCATCCATCGTGATCTCAAAGCTAGCAATATTTTGTTGGATGAGAAGATGAATCCAAAAATTGCAGATTTTGGTACAGCAAGAATGTTTGAAGTAGATGGAACTCATGGGAATACAAATAGAATTGTGGGAACTTATGGATATATGGCTCCAGAGTATGCATTGGATGGACAATTTTCAGTAAAATCGGATGTATTTAGCTTTGGTGTTTTGGTTCTTGAAATTATAAGTGGTCAAAAAAATATTTGTTTTCGCAATGGAAAAAAAGTGGAAGATCTCTCCAACTTTGCATGGAAAAATTGGAGGGCAGGAACACCAATGAATGTGATAGATCCAAAATTAAAAGATGGTTCTACTTTTGAAATGGTAAGATGCATACATATTGGACTATTGTGTGTTCAAGAAAATGCAGCAGATCGACCAACAATGGCTTCATTAATTTTGATGCTTGGTAGTTTCTCTCTCACTCTTCCTATACCATCCCAACCAGCATTCTTTATGCACAGTAATATTGAAGAATCTAACACTGTGGCAAAACCAAATCCTCCATTGGGAATGGCTCAATCTTTTCATTTCAAAAGTACACCTCTTGAGCCATCACTGAATGAAATTTCAATCACTGAGCTTCGTCCTCATTAG | 2073 | 39.8 | MEMGSSWKWRWRMIFIFSQLIITTICQPPFVQHKCSDDVGNYTNSSPFKKNLDAVLNSISTNSQTDKGFYATAGEEPNRATAMVLCRGPVPLENCRVCVKNSTQRISQTCPNQKEAAGWYPDCQIIYSNKSIQGVVDNSTPTFMFYNTIKAPDPSVFNQVLRSLLEEMRVQLAETGTPTLKSANGVKEVPNNGPSPSDITHIYGLFDCFSDLSLSDCDRCLTLLQSYLPVCCNASIGARLMADSCKLNYEIPPIYASLLPTTVPPPPPFYLSLPPTQTQGVDNNNSARRIVIIVVSSTLSFSMLFSRILLIFLRKRKRNQKVKRIFETADQSTTTNEILSIEMLQFVFETIELGTNEFSSENKIGEGGFGAVYKGKLPNGREIAVKRLAKDSQQGDVEFRNEVLLVAKLHHRNLVRLLGFCLQKNERLLVYEFVQNASLDHFIFDFHNRILLDWETRYKIINGIARGLLYLHEESRLLIIHRDLKASNILLDEKMNPKIADFGTARMFEVDGTHGNTNRIVGTYGYMAPEYALDGQFSVKSDVFSFGVLVLEIISGQKNICFRNGKKVEDLSNFAWKNWRAGTPMNVIDPKLKDGSTFEMVRCIHIGLLCVQENAADRPTMASLILMLGSFSLTLPIPSQPAFFMHSNIEESNTVAKPNPPLGMAQSFHFKSTPLEPSLNEISITELRPH | 690 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 33039984 | 33043756 | - | CmPI595203_01g019750.1 | Cmu01g1975 | 407481 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu01g1975 | 690 | SMART | serkin_6 | 358 | 628 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu01g1975 | 690 | Pfam | Salt stress response/antifungal | 34 | 130 | IPR002902 | - | |
Cmu01g1975 | 690 | Pfam | Salt stress response/antifungal | 152 | 250 | IPR002902 | - | |
Cmu01g1975 | 690 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 479 | 491 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu01g1975 | 690 | CDD | STKc_IRAK | 364 | 628 | - | - | |
Cmu01g1975 | 690 | PANTHER | RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 | 96 | 644 | - | GO:0004674(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Cmu01g1975 | 690 | SUPERFAMILY | Protein kinase-like (PK-like) | 346 | 659 | IPR011009 | - | |
Cmu01g1975 | 690 | FunFam | Cysteine-rich receptor-like protein kinase 28 | 434 | 636 | - | - | |
Cmu01g1975 | 690 | Gene3D | - | 139 | 253 | IPR038408 | - | |
Cmu01g1975 | 690 | Gene3D | - | 28 | 131 | IPR038408 | - | |
Cmu01g1975 | 690 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 316 | 433 | - | - | |
Cmu01g1975 | 690 | Gene3D | Phosphorylase Kinase; domain 1 | 318 | 433 | - | - | |
Cmu01g1975 | 690 | ProSiteProfiles | Protein kinase domain profile. | 358 | 643 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu01g1975 | 690 | Gene3D | Transferase(Phosphotransferase) domain 1 | 434 | 634 | - | - | |
Cmu01g1975 | 690 | ProSiteProfiles | Gnk2-homologous domain profile. | 30 | 132 | IPR002902 | - | |
Cmu01g1975 | 690 | Pfam | Protein kinase domain | 359 | 567 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu01g1975 | 690 | ProSitePatterns | Protein kinases ATP-binding region signature. | 364 | 386 | IPR017441 | GO:0005524(InterPro) | |
Cmu01g1975 | 690 | ProSiteProfiles | Gnk2-homologous domain profile. | 139 | 254 | IPR002902 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g1975 | Cmu-Chr1:33039984 | Cmu01g2174 | Cmu-Chr1:34299511 | 3.20E-211 | dispersed | |
Cmu01g1975 | Cmu-Chr1:33039984 | Cmu01g2173 | Cmu-Chr1:34293961 | 1.70E-207 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75237 | PF00069 | Pkinase | 1.40E-47 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu01g1975 | - | - | - | 0.0 |