Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu01g2051 | ATGTTTCCCAGACTCGTTAATCCCGACGGAGATATCCAGATCCATGGCCCCCGTGGTTCTGTTGCTTCCGACCTAACCCACAGTCATCGAGGAGACCCTTGTCTCGTTTTGACTTCAGATCCCAAACCTCGCCTCCGCTGGACTGCCGATCTTCACGAGCGATTCGTCGATGCCGTCACTCAGCTCGGTGGTGCTGGCAAAGCTACTCCAAAAGCAATAATGCGAACAATGAATGTGAAAGGACTGACTCTCTTCCATCTGAAGAGCCACCTCCAGAAATACAGATTAGGTAAGCAATCAGGGAAGGATATGGGTGAGGCATCTAAAGATGGTGCATATCTTTTAGAAAGTCCAAGTACGAATAATTTCTCTCCTGACTTGCCAATTTCTGAAATGGCCGATGGTTATGAAGTCAAGGAGGCATTAAGAGCGCAAATGGAAGTTCAAAGTAAATTACATCTGCAAGTTGAGGCAGAGAAGCACCTACGAATTCGTCAGGATGCCGAGCGAAGATATTTGGCCATGCTTGAGAGAGCTTGTAAAATGCTTGCAGATCAATTCATTGGAGGCGCAGTTTCGGACTCAGACAGCAAGAAGTCCCAAGGACAGGATCGTAAGAGCCCAAGAGGTTCCTCCATTGACCCACTTGGTTTCTATGCTTCCCAATCGCAAGAGATGGAAAGAGTGAATGGCACGGAAGAAGTGCAGGCTAATCTCCCTTGCCAAAGGGCTGATTGTTCAACCGAAAGCTGCCTAACCTCCAACGAGAGTCCCGGAGGATTGGCTATGGAAAAATCTCCTGTTGCAAGCAAGAAAAACATGGTTAACTTGGATTCAGCAACTGCATCTTTGATTTGGGGTGAAGCTAAGGAAAGAATACAAGATGCTAACATCATCCAAGTTAACCATCACGGCGTATCTGGATGCGACATGTGGGGATGA | 942 | 47.35 | MFPRLVNPDGDIQIHGPRGSVASDLTHSHRGDPCLVLTSDPKPRLRWTADLHERFVDAVTQLGGAGKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMGEASKDGAYLLESPSTNNFSPDLPISEMADGYEVKEALRAQMEVQSKLHLQVEAEKHLRIRQDAERRYLAMLERACKMLADQFIGGAVSDSDSKKSQGQDRKSPRGSSIDPLGFYASQSQEMERVNGTEEVQANLPCQRADCSTESCLTSNESPGGLAMEKSPVASKKNMVNLDSATASLIWGEAKERIQDANIIQVNHHGVSGCDMWG | 313 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 33535550 | 33540380 | - | CmPI595203_01g020510.1 | Cmu01g2051 | 407557 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu01g2051 | 313 | Pfam | Myb-like DNA-binding domain | 44 | 95 | IPR001005 | - | |
Cmu01g2051 | 313 | MobiDBLite | consensus disorder prediction | 1 | 26 | - | - | |
Cmu01g2051 | 313 | Gene3D | - | 41 | 99 | - | - | |
Cmu01g2051 | 313 | MobiDBLite | consensus disorder prediction | 191 | 216 | - | - | |
Cmu01g2051 | 313 | SUPERFAMILY | Homeodomain-like | 42 | 98 | IPR009057 | - | |
Cmu01g2051 | 313 | NCBIfam | myb-like DNA-binding domain, SHAQKYF class | 42 | 97 | IPR006447 | GO:0003677(InterPro) | |
Cmu01g2051 | 313 | PANTHER | MYB FAMILY TRANSCRIPTION FACTOR PHL11 | 26 | 291 | IPR046955 | GO:0003700(InterPro) | |
Cmu01g2051 | 313 | Pfam | MYB-CC type transfactor, LHEQLE motif | 137 | 182 | IPR025756 | - | |
Cmu01g2051 | 313 | FunFam | Myb family transcription factor | 41 | 99 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g2051 | Cmu-Chr1:33535550 | Cmu05g0357 | Cmu-Chr5:3032904 | 3.80E-42 | dispersed | |
Cmu01g2050 | Cmu-Chr1:33528684 | Cmu01g2051 | Cmu-Chr1:33535550 | 6.90E-21 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5597 | PF00249 | Myb_DNA-binding | 8.40E-06 | CL0123 | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu01g2051 | - | - | - | 0.0 |