Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g2155 ATGATCTCTTCACTGAGGCTTACATCTACCAATTACACTTCCTCTGAAATTTTGAACAGAAAATCTCCAGTTCTGAGGCCGAATCTTCCATTGCAGTCCCCGGATTGCAGTGCCCTTAAACATGTCGATCGGTCTCTTTCTACCAACAAACCACTTCACATCTCGTCCGTTGAAAATCTTTCTTTGCCCACAAAATCATTGGAGCGTTCGACGGTGTCCATGGCTTATGAGGCCGAATCGCGGCCTCTGCAGATTAACATTGAGCTTCCTGATGAACAAACGACACAGAAACTCAAAATTGGACTCTATTTCGCCACTTGGTGGGCTTTGAATGTGGTGTTCAATGTCTACAACAAGAAGGTTCTTAATGCCTTCCCTTTTCCTTGGCTCACTTCCACTCTCTCCCTCGCCGCTGGATCGCTCATGATGCTCGTTTCTTGGGCGACTCGAATGGTCGATGCTCCCAAAACCGATTTAGATTTCTGGAAATCCCTATTTCCGGTCGCAGTGGCACATACGATTGGGCATGTTGCAGCAACTGTGAGCATGTCCAAAGTTGCAGTCTCATTCACTCACATAATCAAGAGTGGGGAGCCGGCTTTTAGCGTGCTGGTCTCTAGGTTTCTGTTGGGTGAGATGTTTCCATTGCCTGTTTACTTATCTCTTATCCCAATCATCGGAGGGTGCGCTCTTTCCGCCATTACTGAGCTCAATTTCAACATGATTGGTTTCTCGGGAGCGATGGTATCGAACTTGGCATTTGTGTTTAGAAACATATTTTCGAAGAAAGGGATGAAGGGAAAGTCAGTTAGTGGGATGAATTACTATGCTTGCCTCTCATTGCTCTCTCTGCTAATTCTTACTCCTTTCGCCATTGCTGTGGAGGGACCCAAGTTGTGGGCTGAAGGATTCCAAAAGGCTCTCTCTCAAATTGGTCCCAATTTCATTTGGTGGTTGGGAGCTCAAAGTATGTTCTATCACTTGTACAATCAAGTGTCTTACATGTCTCTTGATCAGATATCGCCATTGACATTCAGCGTTGGTAACACAATGAAGAGAATATTCGTAATAGTATCGTCCATTATCATCTTCCACACGCCTATCCGACCCGTAAACGCCATTGGAGCTGCCATTGCAATCCTTGGAACGTTCCTCTACTCGCAGGCAAAGCTGTGA 1176 45.75 MISSLRLTSTNYTSSEILNRKSPVLRPNLPLQSPDCSALKHVDRSLSTNKPLHISSVENLSLPTKSLERSTVSMAYEAESRPLQINIELPDEQTTQKLKIGLYFATWWALNVVFNVYNKKVLNAFPFPWLTSTLSLAAGSLMMLVSWATRMVDAPKTDLDFWKSLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEMFPLPVYLSLIPIIGGCALSAITELNFNMIGFSGAMVSNLAFVFRNIFSKKGMKGKSVSGMNYYACLSLLSLLILTPFAIAVEGPKLWAEGFQKALSQIGPNFIWWLGAQSMFYHLYNQVSYMSLDQISPLTFSVGNTMKRIFVIVSSIIIFHTPIRPVNAIGAAIAILGTFLYSQAKL 391
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 34178698 34180553 - CmPI595203_01g021550.1 Cmu01g2155 407661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g2155 391 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 98 390 IPR004696 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Cmu01g2155 391 Pfam Triose-phosphate Transporter family 98 387 IPR004853 -
Cmu01g2155 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 140 234 - -
Cmu01g2155 391 PANTHER SOLUTE CARRIER FAMILY 35 96 390 IPR050186 GO:0005794(PANTHER)|GO:0015120(PANTHER)|GO:0015297(PANTHER)|GO:0071917(PANTHER)
Cmu01g2155 391 SUPERFAMILY Multidrug resistance efflux transporter EmrE 284 388 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2155 Cmu-Chr1:34178698 Cmu05g1512 Cmu-Chr5:23003661 1.00E-153 dispersed
Cmu01g2272 Cmu-Chr1:35029488 Cmu01g2155 Cmu-Chr1:34178698 1.70E-62 transposed
Cmu05g0268 Cmu-Chr5:2302370 Cmu01g2155 Cmu-Chr1:34178698 1.50E-86 transposed
Cmu05g2428 Cmu-Chr5:33382384 Cmu01g2155 Cmu-Chr1:34178698 2.80E-64 transposed
Cmu01g2155 Cmu-Chr1:34178698 Cmu10g1364 Cmu-Chr10:6606077 1.00E-153 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g2155 K15283 - csv:101216621 682.174