Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu01g2353 | ATGTCCAAGCCTTATCAGTCACCACTCACAAGAATGATTAGGGGAAAAGGAAAGGGAGATTTCATAAAGACAGCAAACAGCCCTTCTTTTTGTTCTGTTTTAAAAGTTCCTTCTTCAACCAGCTCTTTTCCTCATCAGCCAAAAGAAAATCTTAGATTCTCACCTTCTGATTGTGCTGCTCATTTCACCTGTAAGTTGCAAATAAAGGGGTTCCAGAATCAAGAAGAGAAGATGTCAGACTCACCTCAGAGGAAGATGGGAAGAGGAAAGATTGAGATTAAGAGGATCGAAAATACAACAAATCGTCAAGTCACTTTCTGTAAGAGAAGAAATGGGTTGCTCAAAAAAGCGTATGAACTTTCTGTTCTATGTGATGCTGAAGTTGCTCTCATCGTTTTCTCAAGCCGTGGCCGCCTCTATGAGTATGCTAACAACAGTGTGAAGGCAACAATTGATAGGTACAAGAAGGCATCCTCAGATTCCACCAACACTGGATCTACTTCTGAAGCTAACACTCAGTTTTACCAACAAGAAGCTGCCAAACTCCGAGTTCAGATTGGTAACTTACAGAACTCAAACAGGAACATGTTGGGCGAGTCTTTAAGTTCTTTGAGTGTAAAAGATCTGAGAAGCCTGGAGAGCAAACTTGAGAAAGGAATTAGCAGAATTAGGTCCAAAAAGAATGAACTCCTCTTTGCTGAAATTGAGTATATGCGAAAAAGGGAAATTGATTTGCACAACAACAATCAGCTGCTTCGAGCAAAGATAGCTGAGAGTGAAAGAAATGTGAACATGATGGGAGGAGAATTTGAGCTGATGCAATCTCATCCATACGATCCAAGAGACTTCTTCCAAGTGAACGGCTTACAACATAATCATCAATATCCACGCCAAGACAACATGGCTCTTCACACTCTGATTGGTGGATTGGATTATATTATAAGGAGTGCTGGCCATATGCCGATTGAAAGTCTCAACTTTCTCTGA | 987 | 40.73 | MSKPYQSPLTRMIRGKGKGDFIKTANSPSFCSVLKVPSSTSSFPHQPKENLRFSPSDCAAHFTCKLQIKGFQNQEEKMSDSPQRKMGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYANNSVKATIDRYKKASSDSTNTGSTSEANTQFYQQEAAKLRVQIGNLQNSNRNMLGESLSSLSVKDLRSLESKLEKGISRIRSKKNELLFAEIEYMRKREIDLHNNNQLLRAKIAESERNVNMMGGEFELMQSHPYDPRDFFQVNGLQHNHQYPRQDNMALHTLIGGLDYIIRSAGHMPIESLNFL | 328 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 35604554 | 35611168 | + | CmPI595203_01g023530.1 | Cmu01g2353 | 407859 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu01g2353 | 328 | Gene3D | - | 98 | 179 | IPR036879 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
| Cmu01g2353 | 328 | ProSiteProfiles | K-box domain profile. | 172 | 262 | IPR002487 | GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
| Cmu01g2353 | 328 | FunFam | agamous-like MADS-box protein AGL11 | 98 | 181 | - | - | |
| Cmu01g2353 | 328 | PRINTS | MADS domain signature | 88 | 108 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
| Cmu01g2353 | 328 | PRINTS | MADS domain signature | 108 | 123 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
| Cmu01g2353 | 328 | PRINTS | MADS domain signature | 123 | 144 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
| Cmu01g2353 | 328 | CDD | MADS_MEF2_like | 87 | 161 | IPR033896 | GO:0000977(InterPro)|GO:0045944(InterPro) | |
| Cmu01g2353 | 328 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 86 | 281 | IPR050142 | GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER) | |
| Cmu01g2353 | 328 | ProSiteProfiles | MADS-box domain profile. | 86 | 146 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
| Cmu01g2353 | 328 | Pfam | K-box region | 168 | 256 | IPR002487 | GO:0003700(InterPro)|GO:0005634(InterPro)|GO:0006355(InterPro) | |
| Cmu01g2353 | 328 | Coils | Coil | 209 | 229 | - | - | |
| Cmu01g2353 | 328 | SMART | madsneu2 | 86 | 145 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
| Cmu01g2353 | 328 | SUPERFAMILY | SRF-like | 87 | 163 | IPR036879 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
| Cmu01g2353 | 328 | ProSitePatterns | MADS-box domain signature. | 88 | 142 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) | |
| Cmu01g2353 | 328 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 95 | 142 | IPR002100 | GO:0003677(InterPro)|GO:0046983(InterPro) |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu01g2353 | K09264 | - | - | csv:101221430 | 450.669 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu01g1768 | Cmu-Chr1:31401104 | Cmu01g2353 | Cmu-Chr1:35604554 | 1.50E-35 | dispersed | |
| Cmu01g2353 | Cmu-Chr1:35604554 | Cmu08g0056 | Cmu-Chr8:1266397 | 6.50E-69 | dispersed | |
| Cmu04g0424 | Cmu-Chr4:13984727 | Cmu01g2353 | Cmu-Chr1:35604554 | 5.00E-32 | transposed | |
| Cmu10g1986 | Cmu-Chr10:25546374 | Cmu01g2353 | Cmu-Chr1:35604554 | 1.20E-25 | transposed | |
| Cmu01g2353 | Cmu-Chr1:35604554 | Cmu02g1825 | Cmu-Chr2:32161779 | 2.50E-73 | wgd | |
| Cmu01g2353 | Cmu-Chr1:35604554 | Cmu03g1323 | Cmu-Chr3:8362806 | 1.10E-79 | wgd |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi10g290 | . | . | . | . | . | . | . | Bma01g01473 | Cmo13g00604 | . | Cma03g01355 | Cma07g00152 | Car03g01215 | Car07g00131 | . | . | Cpe10g00122 | Bhi03g00010 | . | . | . | Hepe04g1949 | . | . | Cla01g02351 | Cam01g2468 | Cec04g2114 | Cco04g2193 | Clacu01g2487 | Cmu01g2353 | Cre04g2020 | . | Cone5ag1630 | Cone6ag0933 | Cone9ag0936 | Lsi01g00205 | Csa06g03736 | Chy12g00045 | Cme08g00190 | . | Blo14g00862 | . | . | . | . | . | . | . | Cmo03g01352 | . | Cma13g00575 | . | Car13g00458 | . | Cpe19g01096 | Cpe20g00485 | . | . | . | . | . | . | . | Cla03g00684 | Cam03g0710 | Cec03g0683 | Cco03g0720 | Clacu03g0731 | Cmu03g1323 | Cre03g0993 | Lsi02g00845 | Csa01g02284 | Chy02g00197 | Cme12g01251 |
Syn-Families
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Cmu02g1825 | . | 38 | 274 | MADS-box Gene Family | AT3G58780 | 66.8 | 1.3e-80 | 296.6 | |
| Cmu03g1323 | . | 12 | 234 | MADS-box Gene Family | AT3G58780 | 65.5 | 1.2e-75 | 280.0 | |
| Cmu01g2353 | . | 84 | 306 | MADS-box Gene Family | AT3G58780 | 63.1 | 4.4e-73 | 271.6 | |
| Cmu08g0056 | . | 1 | 226 | MADS-box Gene Family | AT3G58780 | 58.6 | 3.9e-69 | 258.5 | |
| Cmu04g1197 | . | 1 | 245 | MADS-box Gene Family | AT1G26310 | 56.1 | 1.9e-68 | 256.1 | |
| Cmu08g0996 | . | 1 | 178 | MADS-box Gene Family | AT1G26310 | 71.3 | 8.9e-66 | 247.3 | |
| Cmu07g1576 | . | 1 | 235 | MADS-box Gene Family | AT1G26310 | 55.5 | 4.6e-62 | 235.0 | |
| Cmu08g0995 | . | 1 | 180 | MADS-box Gene Family | AT1G26310 | 54.6 | 1.1e-44 | 177.2 | |
| Cmu06g0022 | . | 1 | 158 | MADS-box Gene Family | AT1G26310 | 59.2 | 3.1e-42 | 169.1 | |
| Cmu07g1575 | . | 1 | 173 | MADS-box Gene Family | AT1G26310 | 54.5 | 4.0e-42 | 168.7 | |
| Cmu04g1198 | . | 1 | 174 | MADS-box Gene Family | AT1G26310 | 54.2 | 7.6e-41 | 164.5 | |
| Cmu08g0056 | . | 1 | 227 | MADS-box Gene Family | AT4G09960 | 72.6 | 7.1e-86 | 313.9 | |
| Cmu03g1323 | . | 20 | 197 | MADS-box Gene Family | AT4G09960 | 74.7 | 5.6e-67 | 251.1 | |
| Cmu01g2353 | . | 86 | 261 | MADS-box Gene Family | AT4G09960 | 74.4 | 9.6e-67 | 250.4 | |
| Cmu02g1825 | . | 44 | 223 | MADS-box Gene Family | AT4G09960 | 70.6 | 2.0e-64 | 242.7 | |
| Cmu08g0062 | . | 1 | 204 | MADS-box Gene Family | AT1G71692 | 55.9 | 1.7e-54 | 209.5 | |
| Cmu06g0022 | . | 1 | 241 | MADS-box Gene Family | AT3G61120 | 56.5 | 1.8e-63 | 239.6 | |
| Cmu05g0860 | . | 1 | 171 | MADS-box Gene Family | AT3G61120 | 50.3 | 6.6e-42 | 167.9 | |
| Cmu07g1575 | . | 1 | 173 | MADS-box Gene Family | AT3G61120 | 53.8 | 1.1e-41 | 167.2 | |
| Cmu06g0206 | . | 1 | 170 | MADS-box Gene Family | AT3G61120 | 55.8 | 1.9e-41 | 166.4 | |
| Cmu04g1197 | . | 1 | 168 | MADS-box Gene Family | AT3G61120 | 51.5 | 3.7e-37 | 152.1 | |
| Cmu08g0995 | . | 1 | 173 | MADS-box Gene Family | AT3G61120 | 50.9 | 3.7e-37 | 152.1 | |
| Cmu01g0312 | . | 46 | 253 | MADS-box Gene Family | AT4G11880 | 57.3 | 1.8e-54 | 209.5 | |
| Cmu06g0023 | . | 1 | 218 | MADS-box Gene Family | AT4G11880 | 53.4 | 5.1e-49 | 191.4 | |
| Cmu05g0867 | . | 1 | 168 | MADS-box Gene Family | AT4G11880 | 60.6 | 4.6e-42 | 168.3 | |
| Cmu01g0516 | . | 1 | 203 | MADS-box Gene Family | AT4G11880 | 51.2 | 2.8e-39 | 159.1 | |
| Cmu10g1986 | . | 1 | 244 | MADS-box Gene Family | AT5G13790 | 53.8 | 3.4e-55 | 212.2 | |
| Cmu01g1768 | . | 1 | 160 | MADS-box Gene Family | AT2G22630 | 66.3 | 3.5e-53 | 205.3 | |
| Cmu04g0424 | . | 19 | 176 | MADS-box Gene Family | AT3G57390 | 54.3 | 3.7e-39 | 158.7 | |
| Cmu01g0312 | . | 46 | 255 | MADS-box Gene Family | AT4G22950 | 58.7 | 2.9e-57 | 218.8 | |
| Cmu06g0023 | . | 1 | 218 | MADS-box Gene Family | AT4G22950 | 54.3 | 1.7e-52 | 203.0 | |
| Cmu05g0867 | . | 1 | 168 | MADS-box Gene Family | AT4G22950 | 59.8 | 1.4e-43 | 173.3 | |
| Cmu01g0516 | . | 1 | 203 | MADS-box Gene Family | AT4G22950 | 51.0 | 9.5e-40 | 160.6 | |
| Cmu07g1575 | . | 1 | 246 | MADS-box Gene Family | AT5G15800 | 73.4 | 8.2e-99 | 357.1 | |
| Cmu06g0206 | . | 1 | 241 | MADS-box Gene Family | AT5G15800 | 59.8 | 1.2e-73 | 273.5 | |
| Cmu04g1198 | . | 1 | 253 | MADS-box Gene Family | AT5G15800 | 53.8 | 1.7e-64 | 243.0 | |
| Cmu08g0995 | . | 1 | 173 | MADS-box Gene Family | AT5G15800 | 69.5 | 1.9e-58 | 223.0 | |
| Cmu04g1197 | . | 1 | 174 | MADS-box Gene Family | AT5G15800 | 53.4 | 2.4e-42 | 169.5 | |
| Cmu07g1576 | . | 1 | 175 | MADS-box Gene Family | AT5G15800 | 54.3 | 9.3e-42 | 167.5 | |
| Cmu08g0996 | . | 1 | 176 | MADS-box Gene Family | AT5G15800 | 54.5 | 1.2e-41 | 167.2 | |
| Cmu05g0860 | . | 1 | 171 | MADS-box Gene Family | AT5G15800 | 55.2 | 6.0e-41 | 164.9 | |
| Cmu06g0023 | . | 1 | 162 | MADS-box Gene Family | AT2G45660 | 71.0 | 4.9e-54 | 207.6 | |
| Cmu01g0312 | . | 46 | 203 | MADS-box Gene Family | AT2G45660 | 65.2 | 2.8e-49 | 191.8 | |
| Cmu05g0867 | . | 1 | 157 | MADS-box Gene Family | AT2G45660 | 60.5 | 5.1e-43 | 171.0 | |
| Cmu01g0516 | . | 1 | 151 | MADS-box Gene Family | AT2G45660 | 64.9 | 7.3e-42 | 167.2 | |
| Cmu01g1768 | . | 1 | 155 | MADS-box Gene Family | AT4G37940 | 65.8 | 6.2e-52 | 201.1 | |
| Cmu01g1782 | . | 116 | 338 | MADS-box Gene Family | AT2G22540 | 63.7 | 2.1e-69 | 259.2 | |
| Cmu08g1107 | . | 1 | 201 | MADS-box Gene Family | AT2G22540 | 50.8 | 1.8e-47 | 186.4 | |
| Cmu10g1749 | . | 1 | 155 | MADS-box Gene Family | AT2G22540 | 59.0 | 4.5e-43 | 171.8 | |
| Cmu01g1782 | . | 116 | 342 | MADS-box Gene Family | AT4G24540 | 57.9 | 2.2e-60 | 229.2 | |
| Cmu08g1107 | . | 1 | 204 | MADS-box Gene Family | AT4G24540 | 51.3 | 1.5e-48 | 189.9 | |
| Cmu07g1575 | . | 1 | 171 | MADS-box Gene Family | AT2G03710 | 66.9 | 1.1e-57 | 219.9 | |
| Cmu08g0995 | . | 1 | 171 | MADS-box Gene Family | AT2G03710 | 65.1 | 7.3e-57 | 217.2 | |
| Cmu06g0206 | . | 1 | 176 | MADS-box Gene Family | AT2G03710 | 63.8 | 2.6e-54 | 208.8 | |
| Cmu04g1198 | . | 1 | 172 | MADS-box Gene Family | AT2G03710 | 63.6 | 3.7e-53 | 204.9 | |
| Cmu06g0022 | . | 1 | 169 | MADS-box Gene Family | AT2G03710 | 54.1 | 6.0e-43 | 171.0 | |
| Cmu07g1576 | . | 1 | 173 | MADS-box Gene Family | AT2G03710 | 51.7 | 4.0e-39 | 158.3 | |
| Cmu07g1575 | . | 1 | 170 | MADS-box Gene Family | AT3G02310 | 86.5 | 6.8e-77 | 283.9 | |
| Cmu06g0206 | . | 1 | 172 | MADS-box Gene Family | AT3G02310 | 77.9 | 1.3e-67 | 253.1 | |
| Cmu04g1198 | . | 1 | 171 | MADS-box Gene Family | AT3G02310 | 67.3 | 6.4e-59 | 224.2 | |
| Cmu08g0995 | . | 1 | 170 | MADS-box Gene Family | AT3G02310 | 66.7 | 1.9e-55 | 212.6 | |
| Cmu06g0022 | . | 1 | 168 | MADS-box Gene Family | AT3G02310 | 62.0 | 2.1e-49 | 192.6 | |
| Cmu07g1576 | . | 1 | 181 | MADS-box Gene Family | AT3G02310 | 53.0 | 6.0e-41 | 164.5 | |
| Cmu08g0996 | . | 1 | 181 | MADS-box Gene Family | AT3G02310 | 53.6 | 7.8e-41 | 164.1 | |
| Cmu05g0860 | . | 1 | 187 | MADS-box Gene Family | AT3G02310 | 51.6 | 3.0e-40 | 162.2 | |
| Cmu05g0867 | . | 1 | 146 | MADS-box Gene Family | AT5G62165 | 64.4 | 4.7e-46 | 181.0 | |
| Cmu01g0516 | . | 1 | 138 | MADS-box Gene Family | AT5G62165 | 67.4 | 2.0e-44 | 175.6 | |
| Cmu06g0023 | . | 1 | 154 | MADS-box Gene Family | AT5G62165 | 55.8 | 2.4e-42 | 168.7 | |
| Cmu01g0312 | . | 46 | 198 | MADS-box Gene Family | AT5G62165 | 56.2 | 2.7e-41 | 165.2 | |
| Cmu01g1768 | . | 1 | 142 | MADS-box Gene Family | AT2G14210 | 66.4 | 1.2e-45 | 180.3 | |
| Cmu02g1825 | . | 38 | 274 | MADS-box Gene Family | AT2G42830 | 65.7 | 2.3e-74 | 275.8 | |
| Cmu03g1323 | . | 15 | 201 | MADS-box Gene Family | AT2G42830 | 72.5 | 3.4e-70 | 261.9 | |
| Cmu01g2353 | . | 84 | 306 | MADS-box Gene Family | AT2G42830 | 61.9 | 1.6e-67 | 253.1 | |
| Cmu08g0056 | . | 1 | 183 | MADS-box Gene Family | AT2G42830 | 70.3 | 6.0e-67 | 251.1 | |
| Cmu06g0022 | . | 1 | 245 | MADS-box Gene Family | AT2G45650 | 65.1 | 4.7e-83 | 304.7 | |
| Cmu07g1575 | . | 1 | 246 | MADS-box Gene Family | AT2G45650 | 50.4 | 2.0e-54 | 209.5 | |
| Cmu05g0860 | . | 1 | 172 | MADS-box Gene Family | AT2G45650 | 59.8 | 7.5e-49 | 191.0 | |
| Cmu08g0995 | . | 1 | 195 | MADS-box Gene Family | AT2G45650 | 51.2 | 3.0e-45 | 179.1 | |
| Cmu07g1576 | . | 1 | 179 | MADS-box Gene Family | AT2G45650 | 52.0 | 2.9e-40 | 162.5 | |
| Cmu08g0056 | . | 1 | 168 | MADS-box Gene Family | AT2G45650 | 52.4 | 1.2e-38 | 157.1 | |
| Cmu08g0996 | . | 1 | 177 | MADS-box Gene Family | AT2G45650 | 52.0 | 2.7e-38 | 156.0 | |
| Cmu01g0312 | . | 46 | 219 | MADS-box Gene Family | AT2G45650 | 52.3 | 1.5e-36 | 150.2 | |
| Cmu04g1197 | . | 63 | 237 | MADS-box Gene Family | AT1G69120 | 53.5 | 1.3e-40 | 163.3 | |
| Cmu08g0996 | . | 63 | 179 | MADS-box Gene Family | AT1G69120 | 70.1 | 2.3e-37 | 152.5 | |
| Cmu05g0867 | . | 1 | 145 | MADS-box Gene Family | AT5G51870 | 57.2 | 4.5e-41 | 164.9 | |
| Cmu04g1197 | . | 1 | 239 | MADS-box Gene Family | AT3G30260 | 52.0 | 1.5e-54 | 209.9 | |
| Cmu07g1576 | . | 1 | 239 | MADS-box Gene Family | AT3G30260 | 51.8 | 5.1e-50 | 194.9 | |
| Cmu08g0996 | . | 1 | 178 | MADS-box Gene Family | AT3G30260 | 58.4 | 2.0e-46 | 183.0 | |
| Cmu04g1197 | . | 63 | 241 | MADS-box Gene Family | AT5G60910 | 54.7 | 1.5e-43 | 172.9 | |
| Cmu06g0206 | . | 1 | 242 | MADS-box Gene Family | AT1G24260 | 72.9 | 7.7e-88 | 320.5 | |
| Cmu07g1575 | . | 1 | 245 | MADS-box Gene Family | AT1G24260 | 59.8 | 5.6e-70 | 261.2 | |
| Cmu04g1198 | . | 1 | 252 | MADS-box Gene Family | AT1G24260 | 50.6 | 6.6e-55 | 211.1 | |
| Cmu06g0022 | . | 1 | 244 | MADS-box Gene Family | AT1G24260 | 50.4 | 2.6e-51 | 199.1 | |
| Cmu08g0995 | . | 1 | 156 | MADS-box Gene Family | AT1G24260 | 66.9 | 4.9e-50 | 194.9 | |
| Cmu04g1197 | . | 1 | 157 | MADS-box Gene Family | AT1G24260 | 54.3 | 7.8e-40 | 161.0 | |
| Cmu08g0996 | . | 1 | 159 | MADS-box Gene Family | AT1G24260 | 53.8 | 7.8e-40 | 161.0 | |
| Cmu05g0860 | . | 1 | 171 | MADS-box Gene Family | AT1G24260 | 51.7 | 5.6e-38 | 154.8 | |
| Cmu05g1908 | . | 1 | 248 | MADS-box Gene Family | AT3G54340 | 55.6 | 3.7e-66 | 248.4 | |
| Cmu11g1595 | . | 433 | 571 | MADS-box Gene Family | AT5G20240 | 71.9 | 2.3e-53 | 205.3 | |
| Cmu11g1595 | . | 433 | 571 | MADS-box Gene Family | AT5G20240 | 71.9 | 2.3e-53 | 205.3 | |
| Cmu05g1908 | . | 1 | 248 | MADS-box Gene Family | AT3G54340 | 55.6 | 3.7e-66 | 248.4 | |
| Cmu02g1825 | . | 38 | 274 | MADS-box Gene Family | AT3G58780 | 66.8 | 1.3e-80 | 296.6 | |
| Cmu03g1323 | . | 12 | 234 | MADS-box Gene Family | AT3G58780 | 65.5 | 1.2e-75 | 280.0 | |
| Cmu01g2353 | . | 84 | 306 | MADS-box Gene Family | AT3G58780 | 63.1 | 4.4e-73 | 271.6 | |
| Cmu08g0056 | . | 1 | 226 | MADS-box Gene Family | AT3G58780 | 58.6 | 3.9e-69 | 258.5 | |
| Cmu07g1575 | . | 1 | 246 | MADS-box Gene Family | AT5G15800 | 73.4 | 8.2e-99 | 357.1 | |
| Cmu06g0206 | . | 1 | 241 | MADS-box Gene Family | AT5G15800 | 59.8 | 1.2e-73 | 273.5 | |
| Cmu04g1198 | . | 1 | 253 | MADS-box Gene Family | AT5G15800 | 53.8 | 1.7e-64 | 243.0 | |
| Cmu08g0995 | . | 1 | 173 | MADS-box Gene Family | AT5G15800 | 69.5 | 1.9e-58 | 223.0 | |
| Cmu04g1197 | . | 1 | 174 | MADS-box Gene Family | AT5G15800 | 53.4 | 2.4e-42 | 169.5 | |
| Cmu07g1576 | . | 1 | 175 | MADS-box Gene Family | AT5G15800 | 54.3 | 9.3e-42 | 167.5 | |
| Cmu08g0996 | . | 1 | 176 | MADS-box Gene Family | AT5G15800 | 54.5 | 1.2e-41 | 167.2 | |
| Cmu05g0860 | . | 1 | 171 | MADS-box Gene Family | AT5G15800 | 55.2 | 6.0e-41 | 164.9 | |
| Cmu07g1575 | . | 1 | 171 | MADS-box Gene Family | AT2G03710 | 66.9 | 1.1e-57 | 219.9 | |
| Cmu08g0995 | . | 1 | 171 | MADS-box Gene Family | AT2G03710 | 65.1 | 7.3e-57 | 217.2 | |
| Cmu06g0206 | . | 1 | 176 | MADS-box Gene Family | AT2G03710 | 63.8 | 2.6e-54 | 208.8 | |
| Cmu04g1198 | . | 1 | 172 | MADS-box Gene Family | AT2G03710 | 63.6 | 3.7e-53 | 204.9 | |
| Cmu06g0022 | . | 1 | 169 | MADS-box Gene Family | AT2G03710 | 54.1 | 6.0e-43 | 171.0 | |
| Cmu07g1576 | . | 1 | 173 | MADS-box Gene Family | AT2G03710 | 51.7 | 4.0e-39 | 158.3 | |
| Cmu07g1575 | . | 1 | 170 | MADS-box Gene Family | AT3G02310 | 86.5 | 6.8e-77 | 283.9 | |
| Cmu06g0206 | . | 1 | 172 | MADS-box Gene Family | AT3G02310 | 77.9 | 1.3e-67 | 253.1 | |
| Cmu04g1198 | . | 1 | 171 | MADS-box Gene Family | AT3G02310 | 67.3 | 6.4e-59 | 224.2 | |
| Cmu08g0995 | . | 1 | 170 | MADS-box Gene Family | AT3G02310 | 66.7 | 1.9e-55 | 212.6 | |
| Cmu06g0022 | . | 1 | 168 | MADS-box Gene Family | AT3G02310 | 62.0 | 2.1e-49 | 192.6 | |
| Cmu07g1576 | . | 1 | 181 | MADS-box Gene Family | AT3G02310 | 53.0 | 6.0e-41 | 164.5 | |
| Cmu08g0996 | . | 1 | 181 | MADS-box Gene Family | AT3G02310 | 53.6 | 7.8e-41 | 164.1 | |
| Cmu05g0860 | . | 1 | 187 | MADS-box Gene Family | AT3G02310 | 51.6 | 3.0e-40 | 162.2 | |
| Cmu02g1825 | . | 38 | 274 | MADS-box Gene Family | AT2G42830 | 65.7 | 2.3e-74 | 275.8 | |
| Cmu03g1323 | . | 15 | 201 | MADS-box Gene Family | AT2G42830 | 72.5 | 3.4e-70 | 261.9 | |
| Cmu01g2353 | . | 84 | 306 | MADS-box Gene Family | AT2G42830 | 61.9 | 1.6e-67 | 253.1 | |
| Cmu08g0056 | . | 1 | 183 | MADS-box Gene Family | AT2G42830 | 70.3 | 6.0e-67 | 251.1 | |
| Cmu06g0022 | . | 1 | 245 | MADS-box Gene Family | AT2G45650 | 65.1 | 4.7e-83 | 304.7 | |
| Cmu07g1575 | . | 1 | 246 | MADS-box Gene Family | AT2G45650 | 50.4 | 2.0e-54 | 209.5 | |
| Cmu05g0860 | . | 1 | 172 | MADS-box Gene Family | AT2G45650 | 59.8 | 7.5e-49 | 191.0 | |
| Cmu08g0995 | . | 1 | 195 | MADS-box Gene Family | AT2G45650 | 51.2 | 3.0e-45 | 179.1 | |
| Cmu07g1576 | . | 1 | 179 | MADS-box Gene Family | AT2G45650 | 52.0 | 2.9e-40 | 162.5 | |
| Cmu08g0056 | . | 1 | 168 | MADS-box Gene Family | AT2G45650 | 52.4 | 1.2e-38 | 157.1 | |
| Cmu08g0996 | . | 1 | 177 | MADS-box Gene Family | AT2G45650 | 52.0 | 2.7e-38 | 156.0 | |
| Cmu01g0312 | . | 46 | 219 | MADS-box Gene Family | AT2G45650 | 52.3 | 1.5e-36 | 150.2 | |
| Cmu04g1197 | . | 63 | 237 | MADS-box Gene Family | AT1G69120 | 53.5 | 1.3e-40 | 163.3 | |
| Cmu08g0996 | . | 63 | 179 | MADS-box Gene Family | AT1G69120 | 70.1 | 2.3e-37 | 152.5 | |
| Cmu04g1197 | . | 63 | 241 | MADS-box Gene Family | AT5G60910 | 54.7 | 1.5e-43 | 172.9 | |
| Cmu06g0206 | . | 1 | 242 | MADS-box Gene Family | AT1G24260 | 72.9 | 7.7e-88 | 320.5 | |
| Cmu07g1575 | . | 1 | 245 | MADS-box Gene Family | AT1G24260 | 59.8 | 5.6e-70 | 261.2 | |
| Cmu04g1198 | . | 1 | 252 | MADS-box Gene Family | AT1G24260 | 50.6 | 6.6e-55 | 211.1 | |
| Cmu06g0022 | . | 1 | 244 | MADS-box Gene Family | AT1G24260 | 50.4 | 2.6e-51 | 199.1 | |
| Cmu08g0995 | . | 1 | 156 | MADS-box Gene Family | AT1G24260 | 66.9 | 4.9e-50 | 194.9 | |
| Cmu04g1197 | . | 1 | 157 | MADS-box Gene Family | AT1G24260 | 54.3 | 7.8e-40 | 161.0 | |
| Cmu08g0996 | . | 1 | 159 | MADS-box Gene Family | AT1G24260 | 53.8 | 7.8e-40 | 161.0 | |
| Cmu05g0860 | . | 1 | 171 | MADS-box Gene Family | AT1G24260 | 51.7 | 5.6e-38 | 154.8 | |
| Cmu04g1197 | . | 1 | 245 | MADS-box Gene Family | AT1G26310 | 56.1 | 1.9e-68 | 256.1 | |
| Cmu08g0996 | . | 1 | 178 | MADS-box Gene Family | AT1G26310 | 71.3 | 8.9e-66 | 247.3 | |
| Cmu07g1576 | . | 1 | 235 | MADS-box Gene Family | AT1G26310 | 55.5 | 4.6e-62 | 235.0 | |
| Cmu08g0995 | . | 1 | 180 | MADS-box Gene Family | AT1G26310 | 54.6 | 1.1e-44 | 177.2 | |
| Cmu06g0022 | . | 1 | 158 | MADS-box Gene Family | AT1G26310 | 59.2 | 3.1e-42 | 169.1 | |
| Cmu07g1575 | . | 1 | 173 | MADS-box Gene Family | AT1G26310 | 54.5 | 4.0e-42 | 168.7 | |
| Cmu04g1198 | . | 1 | 174 | MADS-box Gene Family | AT1G26310 | 54.2 | 7.6e-41 | 164.5 | |
| Cmu08g0056 | . | 1 | 227 | MADS-box Gene Family | AT4G09960 | 72.6 | 7.1e-86 | 313.9 | |
| Cmu03g1323 | . | 20 | 197 | MADS-box Gene Family | AT4G09960 | 74.7 | 5.6e-67 | 251.1 | |
| Cmu01g2353 | . | 86 | 261 | MADS-box Gene Family | AT4G09960 | 74.4 | 9.6e-67 | 250.4 | |
| Cmu02g1825 | . | 44 | 223 | MADS-box Gene Family | AT4G09960 | 70.6 | 2.0e-64 | 242.7 | |
| Cmu08g0062 | . | 1 | 204 | MADS-box Gene Family | AT1G71692 | 55.9 | 1.7e-54 | 209.5 | |
| Cmu06g0022 | . | 1 | 241 | MADS-box Gene Family | AT3G61120 | 56.5 | 1.8e-63 | 239.6 | |
| Cmu05g0860 | . | 1 | 171 | MADS-box Gene Family | AT3G61120 | 50.3 | 6.6e-42 | 167.9 | |
| Cmu07g1575 | . | 1 | 173 | MADS-box Gene Family | AT3G61120 | 53.8 | 1.1e-41 | 167.2 | |
| Cmu06g0206 | . | 1 | 170 | MADS-box Gene Family | AT3G61120 | 55.8 | 1.9e-41 | 166.4 | |
| Cmu04g1197 | . | 1 | 168 | MADS-box Gene Family | AT3G61120 | 51.5 | 3.7e-37 | 152.1 | |
| Cmu08g0995 | . | 1 | 173 | MADS-box Gene Family | AT3G61120 | 50.9 | 3.7e-37 | 152.1 | |
| Cmu01g0312 | . | 46 | 253 | MADS-box Gene Family | AT4G11880 | 57.3 | 1.8e-54 | 209.5 | |
| Cmu06g0023 | . | 1 | 218 | MADS-box Gene Family | AT4G11880 | 53.4 | 5.1e-49 | 191.4 | |
| Cmu05g0867 | . | 1 | 168 | MADS-box Gene Family | AT4G11880 | 60.6 | 4.6e-42 | 168.3 | |
| Cmu01g0516 | . | 1 | 203 | MADS-box Gene Family | AT4G11880 | 51.2 | 2.8e-39 | 159.1 | |
| Cmu10g1986 | . | 1 | 244 | MADS-box Gene Family | AT5G13790 | 53.8 | 3.4e-55 | 212.2 | |
| Cmu01g1768 | . | 1 | 160 | MADS-box Gene Family | AT2G22630 | 66.3 | 3.5e-53 | 205.3 | |
| Cmu04g0424 | . | 19 | 176 | MADS-box Gene Family | AT3G57390 | 54.3 | 3.7e-39 | 158.7 | |
| Cmu01g0312 | . | 46 | 255 | MADS-box Gene Family | AT4G22950 | 58.7 | 2.9e-57 | 218.8 | |
| Cmu06g0023 | . | 1 | 218 | MADS-box Gene Family | AT4G22950 | 54.3 | 1.7e-52 | 203.0 | |
| Cmu05g0867 | . | 1 | 168 | MADS-box Gene Family | AT4G22950 | 59.8 | 1.4e-43 | 173.3 | |
| Cmu01g0516 | . | 1 | 203 | MADS-box Gene Family | AT4G22950 | 51.0 | 9.5e-40 | 160.6 | |
| Cmu06g0023 | . | 1 | 162 | MADS-box Gene Family | AT2G45660 | 71.0 | 4.9e-54 | 207.6 | |
| Cmu01g0312 | . | 46 | 203 | MADS-box Gene Family | AT2G45660 | 65.2 | 2.8e-49 | 191.8 | |
| Cmu05g0867 | . | 1 | 157 | MADS-box Gene Family | AT2G45660 | 60.5 | 5.1e-43 | 171.0 | |
| Cmu01g0516 | . | 1 | 151 | MADS-box Gene Family | AT2G45660 | 64.9 | 7.3e-42 | 167.2 | |
| Cmu01g1768 | . | 1 | 155 | MADS-box Gene Family | AT4G37940 | 65.8 | 6.2e-52 | 201.1 | |
| Cmu01g1782 | . | 116 | 338 | MADS-box Gene Family | AT2G22540 | 63.7 | 2.1e-69 | 259.2 | |
| Cmu08g1107 | . | 1 | 201 | MADS-box Gene Family | AT2G22540 | 50.8 | 1.8e-47 | 186.4 | |
| Cmu10g1749 | . | 1 | 155 | MADS-box Gene Family | AT2G22540 | 59.0 | 4.5e-43 | 171.8 | |
| Cmu01g1782 | . | 116 | 342 | MADS-box Gene Family | AT4G24540 | 57.9 | 2.2e-60 | 229.2 | |
| Cmu08g1107 | . | 1 | 204 | MADS-box Gene Family | AT4G24540 | 51.3 | 1.5e-48 | 189.9 | |
| Cmu05g0867 | . | 1 | 146 | MADS-box Gene Family | AT5G62165 | 64.4 | 4.7e-46 | 181.0 | |
| Cmu01g0516 | . | 1 | 138 | MADS-box Gene Family | AT5G62165 | 67.4 | 2.0e-44 | 175.6 | |
| Cmu06g0023 | . | 1 | 154 | MADS-box Gene Family | AT5G62165 | 55.8 | 2.4e-42 | 168.7 | |
| Cmu01g0312 | . | 46 | 198 | MADS-box Gene Family | AT5G62165 | 56.2 | 2.7e-41 | 165.2 | |
| Cmu01g1768 | . | 1 | 142 | MADS-box Gene Family | AT2G14210 | 66.4 | 1.2e-45 | 180.3 | |
| Cmu05g0867 | . | 1 | 145 | MADS-box Gene Family | AT5G51870 | 57.2 | 4.5e-41 | 164.9 | |
| Cmu04g1197 | . | 1 | 239 | MADS-box Gene Family | AT3G30260 | 52.0 | 1.5e-54 | 209.9 | |
| Cmu07g1576 | . | 1 | 239 | MADS-box Gene Family | AT3G30260 | 51.8 | 5.1e-50 | 194.9 | |
| Cmu08g0996 | . | 1 | 178 | MADS-box Gene Family | AT3G30260 | 58.4 | 2.0e-46 | 183.0 |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0000220 | 5 | 8 | 4 | 7 | 6 | 6 | 7 | 6 | 5 | 4 | 5 | 5 | 5 | 4 | 4 | 4 | 7 | 9 | 6 | 6 | 5 | 4 | 5 | 5 | 6 | 7 | 5 | 6 | 9 | 3 | 168 |
Regulatory proteins
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 5631 | PF01486 | K-box | 5.00E-28 | No_clan | Cmu | TF |