Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu01g2355 ATGGAGAAATCAAGTTTCTTTCTCCTTCTGCTGCTCCTCCTTCTCCTCCCTTTCATTCAACAAGCCTCTTCTTCCCACACTCACAAAAAGGCTTACATTGTTTACTTTGGAGAACACCATGGAGATAAGAGTTGGGAAGAGATAGAAGCAATTCACCATTCATATTTGATGTCTGTTAAAAAGAGTGAAGAAGATGCAAAATCCTCTCTTCTGTACAATTACAAACACTCCATCAATGCCTTTGCTGCAATTCTTACTCCTCAACAAGCCTCCAAACTTTTAGAATTGGATGAAGTGGTGTCTGTGATAGAGAGTAAAAAGTATATGATGCACACAACAAGGTCATGGGAGTTTTCAGGGGTTGAAGAAGACAAACCCACCATTAATGACTTGGTTTCTAGAGCTAACTATGGAAAGGATGTTGTGATTGGAATGCTTGACAGTGGTGTGTGGCCAAAGTCCAAAAGCTTTAGTGACAAAGGGATGGGACCCATTCCAAAATCATGGAAGGGAATCTGCCAAACAGGACCTGCCTTTCAATCTGCTCATTGTAATAGGAAGATAATTGGAGCTCGATATTACCTAAAGGGATACGAGCATCACTTTGGCCGTTTAAATGAAACGGCGGACTACCGATCACCCTGCGACAAGGACGGCCACGGATCTCACACAGCCTCCATCGCCGGCGGCCGGAGGGTATACAATGTGTCGGGCTTTGGCGGCGTCGCTTGGGGCACGGCCTCTGGCGGCGCCCCATGGGCCCGGCTTGCAATTTACAAAGTTTGTTGGGCCATTCCCAACCAAATGAAAGCTCTGGGAAACGTTTGTTTCGACACTGACATGTTGGCTGCCATGGACGACGCCATTGCCGACGGCGTCGATGTTCTCAGCTTGTCCATCGGAAAATCGGAACCGTACAATTACACGGATGACGGAATCGCCATCGGAGCTCTGCACGCCGTTAAAAAAGACATCGTTGTGTCTTGTAGCGCTGGGAATTATGGGCCTACGCCGTCGGCGTTGTCTAATGTTGCTCCGTGGATCATAACCGTTGGAGCTAGCACTGTGGATCGGGAATTTTATTCTCCGGTCATTCTCGGTAATGGATTGAAGATTAAGGGATTGTCGGTGGCTCCTTCGAAGTTGAAGAGGAAGAAGATGTATCCATTGGTGTATGCTGGAGATATAATGAAGCCTCATGTACCTCGTAACCAATCTGGGCTATGTGTGGCAGGCTCGCTTTCACACGAGAAAGCCAAAGGAAAGATAGTGTTGTGCTTTAGAGGAGAAGGAATCAGCCGATACGCCGGCAGCCTAGAAGTTAAAAGGTCAGGCGGCGCCGGAATGATACTTGGAAACGTGCCGGCGGTAGGACGGAGGCTGCACGCCGATCCCCATTTCGTTCCGGCCACCGCCGTCTCTTACGAAGATGCAAATATGATCCTTAAATATATAAAATCTCGCGCAAATCCAACTGCAACTATTGTTCCACCTGTCACTATCTACGGCTCCAGGCCGGCGCCGGCCATGGCCAACTTCTCAAGTAGAGGTCCAAACCCCGTTGACCCTCATTTTCTTAAGCCAGACATAACAGCTCCGGGGGTGGACATACTAGCAGCATGGTCCGAAGAAGATTCCCCAACTAAACTTCCAAAATCCTTGGACTCTCGTATTGTCCAATACAATCTCTACTCCGGCACCTCCATGTCCTGTCCCCACGTCTCCGCCGCCGCTGCCCTCCTCCGCGCCATCCACCCTACATGGTCCCAAGCCGCCATCCGCTCCGCCCTCATGACCACCGCCACCACCAACAACAAATCCGGCCACCCCATCACCGACGACGCCACCCCCGACAACTCCCCCGCCAACCCTTTCTCCTTTGGGTCCGGCCACTTCCGCCCCTCCAAGGCGGCGGACCCCGGCCTCGTCTACGACACCAATTACACTGACTATCTCCACTACCTGTGCGGCCTCAAAATGAACTCCATTGACCCTTCCTTCACGTGCCCTCCACGTGCCCTCCCACCCCACGACCTCAATTACCCTTCCATTGCCGTCCCCCAACTCAGAGGCACCGTGAGGATCAAAAGGACCGTCACGAACGTGGGCGGCGGAGGTAAAAGTGTGTACTTCTTTTACAGCGAGGCGCCGCCGGGTGTGGCTGTGAGTGCTTCTCCTAATATACTGTATTTCAATAGAGTTGGGGAGAGGAAAAGATTTACAATTTCAGTGAGTGGGAAAGTGAAAAATAGTAATAATAATAGTAGTAATAATGGGTACTCTTTTGGTTGGTTTGCTTGGAGTGATGGGACTCACTATGTTAGAAGCCCAATTGCAGTTTCTTCTACTTAA 2352 50.17 MEKSSFFLLLLLLLLLPFIQQASSSHTHKKAYIVYFGEHHGDKSWEEIEAIHHSYLMSVKKSEEDAKSSLLYNYKHSINAFAAILTPQQASKLLELDEVVSVIESKKYMMHTTRSWEFSGVEEDKPTINDLVSRANYGKDVVIGMLDSGVWPKSKSFSDKGMGPIPKSWKGICQTGPAFQSAHCNRKIIGARYYLKGYEHHFGRLNETADYRSPCDKDGHGSHTASIAGGRRVYNVSGFGGVAWGTASGGAPWARLAIYKVCWAIPNQMKALGNVCFDTDMLAAMDDAIADGVDVLSLSIGKSEPYNYTDDGIAIGALHAVKKDIVVSCSAGNYGPTPSALSNVAPWIITVGASTVDREFYSPVILGNGLKIKGLSVAPSKLKRKKMYPLVYAGDIMKPHVPRNQSGLCVAGSLSHEKAKGKIVLCFRGEGISRYAGSLEVKRSGGAGMILGNVPAVGRRLHADPHFVPATAVSYEDANMILKYIKSRANPTATIVPPVTIYGSRPAPAMANFSSRGPNPVDPHFLKPDITAPGVDILAAWSEEDSPTKLPKSLDSRIVQYNLYSGTSMSCPHVSAAAALLRAIHPTWSQAAIRSALMTTATTNNKSGHPITDDATPDNSPANPFSFGSGHFRPSKAADPGLVYDTNYTDYLHYLCGLKMNSIDPSFTCPPRALPPHDLNYPSIAVPQLRGTVRIKRTVTNVGGGGKSVYFFYSEAPPGVAVSASPNILYFNRVGERKRFTISVSGKVKNSNNNSSNNGYSFGWFAWSDGTHYVRSPIAVSST 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 35621593 35629605 + CmPI595203_01g023550.1 Cmu01g2355 407861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu01g2355 783 ProSiteProfiles Serine proteases, subtilase domain profile. 115 638 - -
Cmu01g2355 783 FunFam Subtilisin-like protease SBT1.5 140 383 - -
Cmu01g2355 783 Pfam PA domain 388 480 IPR003137 -
Cmu01g2355 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 778 IPR045051 -
Cmu01g2355 783 MobiDBLite consensus disorder prediction 603 630 - -
Cmu01g2355 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 566 576 IPR023828 -
Cmu01g2355 783 Gene3D Peptidase S8/S53 domain 140 651 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu01g2355 783 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cmu01g2355 783 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cmu01g2355 783 PRINTS Subtilisin serine protease family (S8) signature 565 581 IPR015500 -
Cmu01g2355 783 Gene3D - 357 502 - -
Cmu01g2355 783 Pfam Subtilase family 138 612 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu01g2355 783 Pfam Fibronectin type-III domain 678 780 IPR041469 -
Cmu01g2355 783 Gene3D - 655 783 - -
Cmu01g2355 783 SUPERFAMILY Subtilisin-like 111 642 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu01g2355 783 MobiDBLite consensus disorder prediction 603 626 - -
Cmu01g2355 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 18 111 IPR037045 -
Cmu01g2355 783 CDD Peptidases_S8_3 108 602 IPR034197 -
Cmu01g2355 783 CDD PA_subtilisin_like 364 495 - -
Cmu01g2355 783 FunFam Subtilisin-like protease SBT5.3 20 111 - -
Cmu01g2355 783 FunFam subtilisin-like protease SBT1.5 357 502 - -
Cmu01g2355 783 Pfam Peptidase inhibitor I9 32 111 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1207 Cmu-Chr1:23690309 Cmu01g2355 Cmu-Chr1:35621593 9.00E-141 dispersed
Cmu01g2355 Cmu-Chr1:35621593 Cmu10g1225 Cmu-Chr10:5062808 2.70E-169 dispersed
Cmu01g2355 Cmu-Chr1:35621593 Cmu02g0310 Cmu-Chr2:2817119 9.70E-172 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu01g2355 - - - 0.0