Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu01g2375 | ATGTTCACGCTGCAGTTTGTGCCAAATGAAGCGACACTGGATGGTTTATATATCTCAATAATGGGTAAAGTTGACCTCTCGATCTCCTCTGGTACCTATTGGTACGTCAGGATCCAATTGGTCATGAACAATCGAATGGATGATCCTGAACTAGAAGCAATCAGGCAGAGAAGAATGCAGGAACTCATGGCCCAGCGTGGCATGGGAAGCCAAAGTAATCCTGAACAACAGAAGGCCCAGGAAGAAGCTAGGAGTGAAGCAGAGGAACGCAGACAAATGATGCTTAGTCAGATTCTGTCGATGCAAGCGAGAGAAAGACTTTCTCGAATTGCATTGGTTAAACCTGAGAAGGCAAGAGGTGTCGAAGATGTTATACTGAGAGCTGCACAGATGGGCCAAATTGTTGAAAAGGTCTCTGAAGAGAGGCTTATAACATTGCTAGAACAGATCAACAATCAGACCACAAAACAGACGAAAGTCACTGTGAGTATTCATTGCTTACTTCATCGGTACCTGCTGAAATATGAGATTGATCTGTCGCTGTCTGATGCAATCCACGCAAATTTGGAACCATTGATTACAGCTCTTGATGATGGGTTGCATTGGGTTGCTGTTTACAAGTTAAAAGATGGAATTTCTGGGTCCCAACAAAAAGCTTCTCTCTTCCTGATTAACTCCCATTTGAGCTCTCACTTTCTCCATTTGACTTCGAATTCATCCCTAAATATCATTGCCCTGCCTCCGTTTCATTCTGACGCCTTCTGTTTCTGCAAAACTATTGGACTCAAGGCTGCTGGTTGCATCTTGTCCTCAGAGGTCAACCATCGCTATATCTCAATGGAGAAAGAGCCTCTTCTTCCATATCTTAGCCCAAGAGGGAAACCGCCTCCTCCACTTCCTCAATTATGTCCACTCCCTGAAAACGATGAAATTACTCTGCCTATGACCCCCACGGAGCTCAAAGACCGCTTGATCTTTGGTCCTTCGTCGTCCCCACAAGACGCTTCTCCTATATTCGATGCTTTAACGCTAACTCTTTCCTCTTCCAGACCCTCTGCTTCATCTTCTCTTCAGGACCCGTCTACGCCTTTGGACCCAAAATCACAATCGCAGTCTCAACAAGCGTGGCTCGTGGATTCCAATTACACATGGCCCAAGAGCAACCTCCACCGCTCCAAAACCGCGCCTGCCATGGCGGTCATCAACGATGTCAATCATTCGCAGGAGCCCAAGCCACAATTTGGTAAACAATCTATCATCCGCCAAGCTGTTGTTCTTCTAATTATATACTTATCATTGGGCGTGGTTATCTATTGGATTAATCGTGATAAGTTTACGGCTCACGAGACTCATCCTGTGGTCGATGCATTGTACTTTTGCATTGTAACGATGTGTACTATTGGGTATGGAGATATTACCCCCAATAGTGCGGCGACGAAGCTGTTCTCAGTGTTGTTTGTGTTGGTGGGATTTGGGTTTATTGATATATTGCTCTCTGGAATGGTCAGTTATGTGCTTGATTTGCAGGAGAGTTATTTGTTAAGGAATGTAAAGAGGGGGGTGCAGCGTCAATCTGGGAAATCTTATATAATTGATGTGAAGAAGGGAAGAATGAGGATTAGAATGAAAGTGGCATTGGCCCTTGGTGTTGTGATACTTTGTATAGGAGTTGGCATGGGTGTTATGCATTTTGTTGAGAATCTGGGGTGGTTGGATTCATTTTATCTTTCAGTTATGTCTGTCACGACAGTTGGATATGGTGATCAGGCATTCAAGTCAATGACTGGTCGTATTTTTGCTTCTATCTGGTTGCTTGTATCAACCCTTGCTGTAGCTCGGGCGTTTCTTTATTTAGCAGAGGCAAGAGTAGATAAGCGGCACAGGATGATGGCAAAATGGATACTTGGTCAGGATATGACTGTTTCTGAGTTTCTTGCTGCTGATATTGACAACAATGGTTTTGTGAGTAGGTCAGAATATGTGATATACAAGCTGAAGGAGATGGGTAAGGTATCAGAGAAAGATGTCATGCAGATATCTAATAACTTTGATAGGCTAGACACTGGCAAATGTGGGAAGATTACACTGGCTGATCTCTTGGAAAGTCATCACTGA | 2115 | 44.02 | MFTLQFVPNEATLDGLYISIMGKVDLSISSGTYWYVRIQLVMNNRMDDPELEAIRQRRMQELMAQRGMGSQSNPEQQKAQEEARSEAEERRQMMLSQILSMQARERLSRIALVKPEKARGVEDVILRAAQMGQIVEKVSEERLITLLEQINNQTTKQTKVTVSIHCLLHRYLLKYEIDLSLSDAIHANLEPLITALDDGLHWVAVYKLKDGISGSQQKASLFLINSHLSSHFLHLTSNSSLNIIALPPFHSDAFCFCKTIGLKAAGCILSSEVNHRYISMEKEPLLPYLSPRGKPPPPLPQLCPLPENDEITLPMTPTELKDRLIFGPSSSPQDASPIFDALTLTLSSSRPSASSSLQDPSTPLDPKSQSQSQQAWLVDSNYTWPKSNLHRSKTAPAMAVINDVNHSQEPKPQFGKQSIIRQAVVLLIIYLSLGVVIYWINRDKFTAHETHPVVDALYFCIVTMCTIGYGDITPNSAATKLFSVLFVLVGFGFIDILLSGMVSYVLDLQESYLLRNVKRGVQRQSGKSYIIDVKKGRMRIRMKVALALGVVILCIGVGMGVMHFVENLGWLDSFYLSVMSVTTVGYGDQAFKSMTGRIFASIWLLVSTLAVARAFLYLAEARVDKRHRMMAKWILGQDMTVSEFLAADIDNNGFVSRSEYVIYKLKEMGKVSEKDVMQISNNFDRLDTGKCGKITLADLLESHH | 704 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 35774884 | 35789084 | + | CmPI595203_01g023750.1 | Cmu01g2375 | 407881 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu01g2375 | 704 | MobiDBLite | consensus disorder prediction | 350 | 372 | - | - | |
Cmu01g2375 | 704 | SUPERFAMILY | EF-hand | 642 | 701 | IPR011992 | - | |
Cmu01g2375 | 704 | FunFam | Two-pore potassium channel 5 | 408 | 518 | - | - | |
Cmu01g2375 | 704 | Pfam | Ion channel | 426 | 505 | IPR013099 | - | |
Cmu01g2375 | 704 | Pfam | Ion channel | 551 | 620 | IPR013099 | - | |
Cmu01g2375 | 704 | Gene3D | - | 47 | 155 | IPR036883 | GO:0003677(InterPro) | |
Cmu01g2375 | 704 | SUPERFAMILY | Voltage-gated potassium channels | 534 | 640 | - | - | |
Cmu01g2375 | 704 | ProSitePatterns | EF-hand calcium-binding domain. | 648 | 660 | IPR018247 | - | |
Cmu01g2375 | 704 | FunFam | Two-pore potassium channel 3 | 527 | 641 | - | - | |
Cmu01g2375 | 704 | Pfam | Double-stranded DNA-binding domain | 54 | 162 | IPR002836 | GO:0003677(InterPro) | |
Cmu01g2375 | 704 | SUPERFAMILY | Voltage-gated potassium channels | 419 | 505 | - | - | |
Cmu01g2375 | 704 | Gene3D | - | 613 | 704 | - | - | |
Cmu01g2375 | 704 | Gene3D | - | 416 | 516 | - | - | |
Cmu01g2375 | 704 | PRINTS | Two pore domain K+ channel signature | 582 | 591 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Cmu01g2375 | 704 | PRINTS | Two pore domain K+ channel signature | 462 | 490 | IPR003280 | GO:0005267(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro) | |
Cmu01g2375 | 704 | PANTHER | PROGRAMMED CELL DEATH PROTEIN 5 | 46 | 163 | IPR002836 | GO:0003677(InterPro)|GO:0005634(PANTHER)|GO:0005829(PANTHER) | |
Cmu01g2375 | 704 | FunFam | Programmed cell death, putative | 47 | 155 | - | - | |
Cmu01g2375 | 704 | Gene3D | - | 549 | 612 | - | - | |
Cmu01g2375 | 704 | SUPERFAMILY | Double-stranded DNA-binding domain | 54 | 161 | IPR036883 | GO:0003677(InterPro) | |
Cmu01g2375 | 704 | MobiDBLite | consensus disorder prediction | 65 | 87 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g2375 | Cmu-Chr1:35774884 | Cmu09g2025 | Cmu-Chr9:36320271 | 3.80E-50 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu01g2375 | K05389 | - | csv:101220017 | 765.377 |