Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu01g2381 | ATGGCTTCTAGCGTCAGTTTAGCCATTTTCATGATAGCTAGTTTTGTTCTAGTAAGGGTTCTGTCTACCCAACACCAATCCGCCATGGAAGTTGAATTGGAAGCCTTGAAGGCCTTCAAGAGTTGCATCCAGTTCGATCCATTGGGAGCACTTGCAGATTGGACGGACCTTAATCCCCACTGCAATTGGTCTGGCATTATATGTGACCCTGATTCCAAAAGGGTAATTTCGATTACTTTGATTGATCAGCAGCTTGAAGGCGAGATTTCTCCATTTATTGGGAACCTCTCAGCTCTCCAGGTTCTCGATTTAACTCAGAATTCGTTTACCGGGCAGATTCCAGGTGAATTGGGTTCGTGTTCCAACCTTTCTCAGCTCACTCTTTACAGAAACTTTCTTTCAGGTCACATTCCACTCCAGTTGGGAAACCTTGGGTTCCTGCAAGATGTTGATTTGGGAAATAACTTCTTAAAGGGAAGCATTCCTGATAGCATTTGCAATTGCACAAACTTGTTAGCATTTGGTGTAATATTTAATAATCTCACGGGAAGAATCCCATCAAACATAGGAAACTTAGTCGATCTTCAAATTCTGGTTGCATACGCCAACAAGCTTGAAGGTTCCATTCCCATCTCTATTGGCAAACTAGGTGCGCTGCAAACTCTAGATCTTAGCCAGAACAACTTGTCTGGGAATATACCAATGGAGATTGGGAATTTGTTGAATTTGGAGTATATTTCATTGTTTGAGAATGCTTTGGCTGGGAAAATTCCTAAGGAGATAGGTAAATGTGAGAAGCTTCTTTCTTTGGAACTATACAACAATAAGTTCAGTGGTCCAATTCCTTCACAATTAGGCTCTCTGATTCACTTACAAACCTTGCGTCTGTATACAAATAGATTAAATTCCACTATACCACAATCTCTCTTACAGTTGAAAGGTTTAACCCATTTGCTTCTCTCAGAGAACGAGTTAAGTGGAACTGTATCTTCTGATATTGGATCTTTGAGATCATTGCAGGTTTTGACTCTTCACTCGAATAGTTTTTTCGGGGTGATTCCTTTGTCTTTGACAAACTTGTCAAACCTCACACATTTGTCTCTGAGCTTCAATTTTTTCACTGGTGAGATTCCGTCCAATTTAGGTCTGCTTTATAATCTGAAGAGATTGACATTGAGCAGCAATCTCCTAGAAGGTTCAATTCCATCTAGTATTATCAATTGCACCCAGCTTTCTATAATTGATCTTTCATTCAATAGGCTGACAGGAAAAATACCTATGGGATACGGGAAGTTGCAGAATCTTACTTCCCTCTTGCTTGGATCAAATAGAATTTTTGGTGAAATCCCAGATGACTTATTTAATTGCTCATCCCTTGAGGTTGTAGACCTGGCTCTAAACAATTTCACTGGATTATTAAAATCCAGTATCGGCAAGCTTTCCAATATTCGAGTTTTCAGAGCCGCATCAAATTCATTTTCTGGGGAAATTCCAGGTGACATTGGCAACTTAAGCAGGCTCAACACTTTAGTACTTGCAGAAAATAAATTTTCAGGTCAAATTCCTGGGGAGTTGTCTAAGCTTTCTCTTCTTCAAGCTCTTTCTTTGCATGACAATGCATTGGAAGGAAGGATTCCTGAAAAAATATTTGATCTGAAACAACTGGTTCATCTTCATCTGCAGAACAACAAGTTCATAGGTCCAATTCCAGATGTCATCTCAAGACTAGAGTTTCTTTCGTATTTGGACCTTCATGGAAACATGCTTAATGGATCAGTTCCTAAAAGTATGATTAATCTTCATCGACTTGTGATGTTAGATCTGTCCCGAAACCATCTATCTGGATCAATTCCTGGGGTTTTAATCTCAGGTATGAAAGATATGCAACTGTACATGAACTTGTCATACAATTTCCTGGTAGGAGCTATTCCAGCTGAGCTTGGGTTGTTGCGGTTGATACAATCCATTGACTTCTCAAACAACAATCTCACTGGGATTATTCCAGCCACGATCGGAGGTTGTAGAAATTTGTTCTTTCTTGATCTGTCAGGAAATCATCTTTCCGGTATGCTTCCAGGTAAAGCTTTTACCGGAATGAATATTCTCATGAGCTTGAACCTTTCAAGGAACAAAATAGCTGGTGAAATCCCAGAAGAGTTAGCAAATCCGGAGCACTTGTACTATTTGGACCTTTCTCAGAACCAGTTCAATGGCAGAATCCCTCAAAAACTTTCAGCTCTGAAGTATGTTAACCTTTCCTTTAATCAACTAGAAGGTCCTGTTCCAGACACCGGAATATTTCAAAAGATAAATGCTTCAAGCTTGATTGGAAATCCTGCTCTTTGTGGATCCAAGTCCTTCGCTCCTTGCGGAAAGAAGTATTTGCGACATCTATCAAAAAAGACCTTACTAATTCTCATAACCCTTGGATCTATTATTGTAGTCTTAGCTATAATTTTCTTAATTCTAGGCCTCAACCGATATCGTAAGCTTGAGAAATCTAAAAGTATTGAAAATCCTGAACCATCATTGGATTATGCATGTACCCTTAAGAGGTTTGATAAGAAGGATATGGAGATTGCAACAGAATACTTCAGCGATGAAAACATTCTAGGTTCCAGTACTTTAAGCACTGTCTACCGTGGTCAACTAGACAACGGACAGATTGTAGCTGTAAAAAGATTGAATTTGCAATATTTCTCTGCCGAATCAGATGATTTCTTCAGTAGAGAAATCAAGATTCTTTGTCAACTTAGACATAGGAATTTGGTGAAAGTACTCGGATATGCTTGGGAAAGCCAGAAGCTGAAGGCTATCGTGCTTGAATACATGGAAAATGGGAACTTGGATAGAATAATACATAACCCTGGAACAGATCAAATGAGTTGTTCATTGTCAAAGAGGGTTGATATTTGTGTTTCTGTTGCTAGTGGGATGCAATACCTGCATCATGGATATGATTTTCCCATCATTCACTGCGACTTGAAACCTTCAAACATCCTTCTTGATGGAGACTGGGTAGCCCATGTGAGTGATTTTGGAACTGCTAGAGTGTTGGGGGTGCAAAGCCAAGACACAAGCAGCATTTCCTCTTCAGCAGCTTTTGAAGGCAGTATCGGATATTTGGCTCCAGAGTTTGCATACATGGGGAAAGTGACAACAAAAGTAGATGTGTTCAGTTTTGGTGTAATACTGATGGAATTTCTGACAAAGAAGAGGCCAACTGCCACCATTGAAGCTCATGGACTCCCAATCAGCTTGCAGCAACTGGTAGAGAGAGCTCTAGCAAGTGGAAAGGAAGAAGTTAGTCAAGTTTTGGATCCTGTGCTGGTCTTGAATGATTCAAAGGAGCAAGGGAGGTTAGAAGAACTGCTCAAATTAGCACTAAGCTGTACCGCCCCAAATCCTGATAATAGACCTGACATGAATGAAATTCTGCCTATCCTTCTGAAGTTGCGCAGAGATGAATAG | 3471 | 40.02 | MASSVSLAIFMIASFVLVRVLSTQHQSAMEVELEALKAFKSCIQFDPLGALADWTDLNPHCNWSGIICDPDSKRVISITLIDQQLEGEISPFIGNLSALQVLDLTQNSFTGQIPGELGSCSNLSQLTLYRNFLSGHIPLQLGNLGFLQDVDLGNNFLKGSIPDSICNCTNLLAFGVIFNNLTGRIPSNIGNLVDLQILVAYANKLEGSIPISIGKLGALQTLDLSQNNLSGNIPMEIGNLLNLEYISLFENALAGKIPKEIGKCEKLLSLELYNNKFSGPIPSQLGSLIHLQTLRLYTNRLNSTIPQSLLQLKGLTHLLLSENELSGTVSSDIGSLRSLQVLTLHSNSFFGVIPLSLTNLSNLTHLSLSFNFFTGEIPSNLGLLYNLKRLTLSSNLLEGSIPSSIINCTQLSIIDLSFNRLTGKIPMGYGKLQNLTSLLLGSNRIFGEIPDDLFNCSSLEVVDLALNNFTGLLKSSIGKLSNIRVFRAASNSFSGEIPGDIGNLSRLNTLVLAENKFSGQIPGELSKLSLLQALSLHDNALEGRIPEKIFDLKQLVHLHLQNNKFIGPIPDVISRLEFLSYLDLHGNMLNGSVPKSMINLHRLVMLDLSRNHLSGSIPGVLISGMKDMQLYMNLSYNFLVGAIPAELGLLRLIQSIDFSNNNLTGIIPATIGGCRNLFFLDLSGNHLSGMLPGKAFTGMNILMSLNLSRNKIAGEIPEELANPEHLYYLDLSQNQFNGRIPQKLSALKYVNLSFNQLEGPVPDTGIFQKINASSLIGNPALCGSKSFAPCGKKYLRHLSKKTLLILITLGSIIVVLAIIFLILGLNRYRKLEKSKSIENPEPSLDYACTLKRFDKKDMEIATEYFSDENILGSSTLSTVYRGQLDNGQIVAVKRLNLQYFSAESDDFFSREIKILCQLRHRNLVKVLGYAWESQKLKAIVLEYMENGNLDRIIHNPGTDQMSCSLSKRVDICVSVASGMQYLHHGYDFPIIHCDLKPSNILLDGDWVAHVSDFGTARVLGVQSQDTSSISSSAAFEGSIGYLAPEFAYMGKVTTKVDVFSFGVILMEFLTKKRPTATIEAHGLPISLQQLVERALASGKEEVSQVLDPVLVLNDSKEQGRLEELLKLALSCTAPNPDNRPDMNEILPILLKLRRDE | 1156 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 35831437 | 35835178 | - | CmPI595203_01g023810.1 | Cmu01g2381 | 407887 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu01g2381 | 1156 | FunFam | LRR receptor-like serine/threonine-protein kinase FLS2 | 944 | 1156 | - | - | |
Cmu01g2381 | 1156 | SUPERFAMILY | L domain-like | 253 | 546 | - | - | |
Cmu01g2381 | 1156 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 698 | 1152 | IPR050647 | - | |
Cmu01g2381 | 1156 | SUPERFAMILY | L domain-like | 475 | 809 | - | - | |
Cmu01g2381 | 1156 | ProSiteProfiles | Protein kinase domain profile. | 865 | 1149 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu01g2381 | 1156 | Gene3D | Transferase(Phosphotransferase) domain 1 | 944 | 1156 | - | - | |
Cmu01g2381 | 1156 | FunFam | LRR receptor-like serine/threonine-protein kinase ERECTA | 330 | 425 | - | - | |
Cmu01g2381 | 1156 | Gene3D | Ribonuclease Inhibitor | 144 | 232 | IPR032675 | - | |
Cmu01g2381 | 1156 | Pfam | Leucine Rich Repeat | 362 | 382 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | Pfam | Leucine Rich Repeat | 434 | 456 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | Pfam | Leucine Rich Repeat | 147 | 168 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | Pfam | Leucine Rich Repeat | 267 | 288 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | Pfam | Leucine Rich Repeat | 99 | 120 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | Pfam | Leucine Rich Repeat | 386 | 408 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | Pfam | Leucine Rich Repeat | 219 | 240 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | FunFam | Probable leucine-rich repeat receptor-like protein kinase At5g63930 | 184 | 283 | - | - | |
Cmu01g2381 | 1156 | FunFam | LRR receptor-like serine/threonine-protein kinase GSO1 | 429 | 700 | - | - | |
Cmu01g2381 | 1156 | Gene3D | Ribonuclease Inhibitor | 428 | 521 | IPR032675 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 144 | 168 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 96 | 120 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 650 | 673 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 216 | 240 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 528 | 552 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 432 | 456 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 384 | 408 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 699 | 723 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 600 | 624 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 336 | 359 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 360 | 383 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 744 | 769 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 288 | 312 | IPR003591 | - | |
Cmu01g2381 | 1156 | SMART | LRR_typ_2 | 674 | 698 | IPR003591 | - | |
Cmu01g2381 | 1156 | FunFam | Leucine-rich repeat receptor-like protein kinase | 701 | 792 | - | - | |
Cmu01g2381 | 1156 | Pfam | Protein kinase domain | 866 | 1146 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu01g2381 | 1156 | Gene3D | Ribonuclease Inhibitor | 233 | 323 | IPR032675 | - | |
Cmu01g2381 | 1156 | Gene3D | Ribonuclease Inhibitor | 698 | 797 | IPR032675 | - | |
Cmu01g2381 | 1156 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 990 | 1002 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu01g2381 | 1156 | CDD | STKc_IRAK | 871 | 1152 | - | - | |
Cmu01g2381 | 1156 | Gene3D | Phosphorylase Kinase; domain 1 | 828 | 943 | - | - | |
Cmu01g2381 | 1156 | Pfam | Leucine rich repeat | 691 | 736 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | Pfam | Leucine rich repeat | 632 | 687 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | Pfam | Leucine rich repeat | 554 | 613 | IPR001611 | GO:0005515(InterPro) | |
Cmu01g2381 | 1156 | SUPERFAMILY | L domain-like | 31 | 302 | - | - | |
Cmu01g2381 | 1156 | Gene3D | Ribonuclease Inhibitor | 324 | 427 | IPR032675 | - | |
Cmu01g2381 | 1156 | Gene3D | Ribonuclease Inhibitor | 522 | 627 | IPR032675 | - | |
Cmu01g2381 | 1156 | Pfam | Leucine rich repeat N-terminal domain | 32 | 69 | IPR013210 | - | |
Cmu01g2381 | 1156 | FunFam | LRR receptor-like serine/threonine-protein kinase FLS2 | 826 | 943 | - | - | |
Cmu01g2381 | 1156 | Gene3D | Ribonuclease Inhibitor | 628 | 697 | IPR032675 | - | |
Cmu01g2381 | 1156 | Gene3D | Ribonuclease Inhibitor | 31 | 143 | IPR032675 | - | |
Cmu01g2381 | 1156 | SUPERFAMILY | Protein kinase-like (PK-like) | 842 | 1149 | IPR011009 | - | |
Cmu01g2381 | 1156 | FunFam | LRR receptor-like serine/threonine-protein kinase FLS2 | 29 | 183 | - | - | |
Cmu01g2381 | 1156 | SMART | serkin_6 | 865 | 1149 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g1944 | Cmu-Chr1:32769038 | Cmu01g2381 | Cmu-Chr1:35831437 | 1.70E-09 | dispersed | |
Cmu01g2381 | Cmu-Chr1:35831437 | Cmu03g1349 | Cmu-Chr3:8612266 | 2.40E-57 | dispersed | |
Cmu01g2381 | Cmu-Chr1:35831437 | Cmu03g1348 | Cmu-Chr3:8601514 | 2.10E-58 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75265 | PF00069 | Pkinase | 8.10E-44 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu01g2381 | K13420 | - | csv:101215973 | 1959.88 |