Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0026 ATGGGGAAAGGACCGTTTTCTTTCCGCCGGAGCAGTAGTCGCCGCCGCCCTAAGAAGGCGGTTCATTCGTCACCGTCCTCGTCGCCACAGCCACCTCCGCAGATTAGCACCAGTTCTCCTCCCATTAACAATAATGGGAATGGCTTGGTTGGTGGTGGGGGTGGTGGGGTTGTGGGAAAAGTGAAGAAGAAGGCCGGAGGAGCTAGGCTGTGGATGCGTCTCGACAGGTGGGGGCAAGCGGAGCTTTTAGAGTGGGACAAGAATGCTATAATCCGACGTGCTGCAATTCCGGCTAGGGATTTGAGGATTCTTGGTCCTGTTTTCTCACACTCATCTAGCATACTCGCCAGCGAAAAGGCCATGGTTGTTCATTTAGAGTTCATAAAAGCTATAGTTACTGCTGAAGAAGTCCTATTACTTCACCCTCTTCGCCAAGAGGTTATTCCATTTGTAGATCAGCTAAGGAAGCTACTTGCTAAGACGGGTTCATCTCAACTTGAAAATGATGGGAATGTTTCGAGAGGAGGAAAGTGGTTGCCAGTTTCAGAAGCTGCTGAAGGTGAGCAGTATGAGCTCCCGTTTGAGTTTCAGGTTCTGGAAAATGCTTTGGAGGTTGTGTGCATGTACTTGGATTCCAGTGTGGCAGACCTTGAGAGAGACGCTTATCCAGTTCTGGATGAACTGGCTAGGAATGTCAGCACCAAGAATCTAGAACGTGTGAGGAGTTTGAAAAGTAATCTTACCCGTATTCTTGCACGTGTTCAGAAGGTGCGGGATGAGATAGAACATCTATTAGATGATAATGAAGATATGGCACAACTATATTTGACAAGGAAATGGATGCAGAATCAACAATTTGATACTTTGCCGGGAGGTGTGGCTTCCAACAGCACGACTGCTATCGTTCCTCATCTTCGTCTACTTAGTTCCACCAGGAGTGGCAGTGTGGTGACCAGCAACCTTTTGGATGATAATGACGTAGAGGACTTGGAGATGTTGCTCGAGGCATACTTTATGCAGTTGGATGGGACTCGTAACAGGATATTATCGGTTAGGGAATACATCGATGACACCGAGGATTATGTTAATATTCAACTTGACAACCAAAGAAATGAACTTATTCAGTTTCAGTTAACCCTGACAATTGCTTCATTTGCCCATAGCTGTTGA 1170 46.67 MGKGPFSFRRSSSRRRPKKAVHSSPSSSPQPPPQISTSSPPINNNGNGLVGGGGGGVVGKVKKKAGGARLWMRLDRWGQAELLEWDKNAIIRRAAIPARDLRILGPVFSHSSSILASEKAMVVHLEFIKAIVTAEEVLLLHPLRQEVIPFVDQLRKLLAKTGSSQLENDGNVSRGGKWLPVSEAAEGEQYELPFEFQVLENALEVVCMYLDSSVADLERDAYPVLDELARNVSTKNLERVRSLKSNLTRILARVQKVRDEIEHLLDDNEDMAQLYLTRKWMQNQQFDTLPGGVASNSTTAIVPHLRLLSSTRSGSVVTSNLLDDNDVEDLEMLLEAYFMQLDGTRNRILSVREYIDDTEDYVNIQLDNQRNELIQFQLTLTIASFAHSC 389
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 303931 308718 - CmPI595203_02g000260.1 Cmu02g0026 408075
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0026 389 FunFam Magnesium transporter MRS2-1 59 142 - -
Cmu02g0026 389 Gene3D Magnesium transport protein CorA, transmembrane region 144 373 - -
Cmu02g0026 389 CDD Mrs2_Mfm1p-like 71 386 IPR039204 -
Cmu02g0026 389 MobiDBLite consensus disorder prediction 1 55 - -
Cmu02g0026 389 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 57 388 IPR039204 GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cmu02g0026 389 Coils Coil 240 274 - -
Cmu02g0026 389 Gene3D - 59 141 - -
Cmu02g0026 389 Pfam Magnesium transporter MRS2-like 84 286 - -
Cmu02g0026 389 Pfam Magnesium transporter MRS2-like 323 370 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0026 Cmu-Chr2:303931 Cmu05g1054 Cmu-Chr5:9822365 7.00E-179 dispersed
Cmu02g0026 Cmu-Chr2:303931 Cmu07g0122 Cmu-Chr7:1073170 5.20E-73 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0026 K16075 - csv:101203496 617.076