Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0062 ATGGCTTCCCTCTCCTTCCTCTCTTTCCTCTCCCTCTTCTTCTTCTTCCTCTCTCTCTCCTCCTCCTCCGCCGCCGCTCGCCATCGCCACCACCACCTCCCAACCCATTTCACCAACCCCCCTTCCACCGACGACGTCATCCTTCACGCCTGCAAGGCCACCCGTTTTCCCGATCAATGCGGATCTTCCCTCTCTCACTCCTCCTCTCTCCCTCCCAATCCTACCCCTCTCCAGATCCTCCAATCCGCCGTCGCCCTCTCATCCGACGGTTTAGCCACTGCTCAATCCATGGTTAACCAGATTCTCGATTCCTCCGCCAAGAATCTCAATCGGACCACCGCTGCCAAGAACTGCCTTGAGGTACTGCGGAATTCCGATTACCGTATTTCTCTCACCAACGACGCTCTCCGCCGTGGTCGGACCAAGGACGCCCGCGCCTGGCTGAGTGCGTCCCTACTTTACCATTACGATTGCTGGTCTGCGCTCAAGTACGCCAACGACACTCAATTGGTTGACAAAACCATGGCGTTTCTCGATTCTCTTATTGGTCTCTCCAGCAACGCGCTGAGTATGTTGGTGGCTTACGACATTTCCGGCAACGATACGGCGGCGTGGACGCCGCCGAGGACGGAGCGGGATGGGTTTTGGGAAGGCGGTGGTGGCGGATCTGGGTTGGGGTTTAGCGGTGGGTTTCCGTCGAAGGTGGCGGCTGATGCGACGGTGTGCAAGGATGGCGCTGGGGGATGTTATAAAACTGTTCAGGAAGCTGTTAACGCGGCGCCGGAGAATGCGGCGGCGCGTAGGTTTGTGATTCATATTAAGGAAGGTGTTTATGAGGAAATCGTGAGGGTTCCGTTAGAGAAGAAGAATGTGGTGTTTTTAGGAGATGGGATGGGCAAAACGGTCATTACGGGCTCACTTAATGTGGGCCAGCCTGGGATTTCCACTTACAACACCGCCACCGTTGGAGTACTTGGTGATGGATTCATGGCTAGCGGTCTCACCATTCAAAACACAGCAGGGCCAGATGCTCATCAAGCTGTGGCTTTTAGATCAGACAGTGATCTCTCAGTTATTCAAGACTGTGAGTTTCTAGGCAATCAAGACACTCTCTATGCTCACTCCCTTCGCCAATTCTACAAATCTTGTAAGATTCAAGGCAATGTAGATTTCATCTTTGGAAACTCAGCTTCCATCTTCCAAGACTGCGAGATCCTAGTTCGCCCCAGACAGCTCAAGCCTGAGAAAGGTGAAAACAACGCCATCACTGCTCAGGGCAGGACCGACCCTGCTCAAGCGACAGGGTTCGTATTCCAAAACTGCCTCATAAATGGCACTCAGGAGTACATGTCATTGTACTACAGCAAGCCTAAAGTGCATAAAAACTACTTGGGGAGACCGTGGAAGGAGTACTCGAGGACAGTTTTTATACATTGTACTCTCGAGGCTCTTGTCACGCCTGCGGGGTGGATGCCATGGAGTGGGGATTTTGCATTGAAGACTCTTTTCTATGGAGAGTTTGAGAATTCGGGAGCGGGGTCGAAGACATCGGAGAGAGTCGGGTGGAGTAGTCAGATTCCAGCACAACATGTTTTTAGTTACTCTGTTCAAAATTTCATTCAGGGAGACGAATGGATTCCTTCATCTCAGTCATCTAATGAACCAAAAATGTTGAACAAGAAAAGTAAAGATGTGAAATTAGATTAG 1707 51.49 MASLSFLSFLSLFFFFLSLSSSSAAARHRHHHLPTHFTNPPSTDDVILHACKATRFPDQCGSSLSHSSSLPPNPTPLQILQSAVALSSDGLATAQSMVNQILDSSAKNLNRTTAAKNCLEVLRNSDYRISLTNDALRRGRTKDARAWLSASLLYHYDCWSALKYANDTQLVDKTMAFLDSLIGLSSNALSMLVAYDISGNDTAAWTPPRTERDGFWEGGGGGSGLGFSGGFPSKVAADATVCKDGAGGCYKTVQEAVNAAPENAAARRFVIHIKEGVYEEIVRVPLEKKNVVFLGDGMGKTVITGSLNVGQPGISTYNTATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSVIQDCEFLGNQDTLYAHSLRQFYKSCKIQGNVDFIFGNSASIFQDCEILVRPRQLKPEKGENNAITAQGRTDPAQATGFVFQNCLINGTQEYMSLYYSKPKVHKNYLGRPWKEYSRTVFIHCTLEALVTPAGWMPWSGDFALKTLFYGEFENSGAGSKTSERVGWSSQIPAQHVFSYSVQNFIQGDEWIPSSQSSNEPKMLNKKSKDVKLD 568
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 630837 633398 + CmPI595203_02g000620.1 Cmu02g0062 408111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0062 568 FunFam Pectinesterase 232 557 - -
Cmu02g0062 568 Pfam Plant invertase/pectin methylesterase inhibitor 47 191 IPR006501 GO:0004857(InterPro)
Cmu02g0062 568 SUPERFAMILY Pectin lyase-like 235 548 IPR011050 -
Cmu02g0062 568 Gene3D - 232 555 IPR012334 -
Cmu02g0062 568 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 45 191 IPR035513 -
Cmu02g0062 568 Pfam Pectinesterase 238 543 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cmu02g0062 568 SMART PMEI_2 42 191 IPR006501 GO:0004857(InterPro)
Cmu02g0062 568 CDD PMEI-like_3 50 191 - -
Cmu02g0062 568 MobiDBLite consensus disorder prediction 546 568 - -
Cmu02g0062 568 NCBIfam pectinesterase inhibitor domain 10 191 IPR006501 GO:0004857(InterPro)
Cmu02g0062 568 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 194 IPR035513 -
Cmu02g0062 568 PANTHER PECTINESTERASE 8 548 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cmu02g0062 568 FunFam Probable pectinesterase/pectinesterase inhibitor 51 45 194 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0062 Cmu-Chr2:630837 Cmu05g0821 Cmu-Chr5:7424347 6.60E-85 dispersed
Cmu02g0060 Cmu-Chr2:625404 Cmu02g0062 Cmu-Chr2:630837 5.50E-211 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0062 - - - 0.0