Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g0072 | ATGCTGGAAATTTCGCCTTCGCCGGAAAACTCTACCGCCGTCGCCGCTGCCGTCGTGAACCGGGCCGCCGAGGAAGACGGTGCAGCAGCCTCTGCCGGATTTTCGGAGGACGCTGACCGGAACTGGCCCGGTAATCGGTGGCCGCGAGAGGAGACTATGGCTTTGCTGAAGGTTCGGTCGAGTATGGATACTGCGTTTAGGGATGCAAGTTTGAAAGCTCCTCTATGGGAAGAAGTTTCCAGGAAATTGGCTGAGCTTGGGTATAATCGAAATGCGAAAAAATGCAAAGAGAAGTTTGAGAACATTTATAAGTATCACAAAAGGACTAAAGATGGAAGATCAGGGAAAGCGAATGGGAAAAATTATAGGTATTTTGAGCAATTAGAAGCTCTAGATAATAATCCATTGCTTCCCTCTCAAGCTGATTCAATGGAAGAAATCCCAAGGATTATCCCAAACAATGTTGTGCACAATGCAATTCCATGTTCCGTAGTAAACCCGAGTGCAAATTTTGTTGAAACTACCACCACTTCAATATCGACGTCGACCACATCTTGTTCGAGTAAAGAATCGGGTGGGACGAGGAAGAAGAAGAGGAAGTTTGTGGAGTTCTTTGAGAGGTTAATGAACGAGGTGATTGAGAAGCAGGAGAAATTGCAAAAGAAGTTTGTGGAGGCATTGGAGAAATGTGAAGTAGAGAGGTTAGCTAGAGAAGAATGGAAGATGCAAGAATTAGCTCGAATCAAGAAAGAGCGAGAACGTTTAAATCAAGAGAGATCGATTGCAGCTGCAAAGGATGCAGCTGTTCTTTCATTCTTGAAGGTTTTCTCTGAACAAGTGGGCACAGTGCAGTTCCCGGAGAACTTGATTTCAGTGGAGAATTTGACTGAGAAGCAAGATGATGGTAATGTTGACAGAAACACAAGCACTCAAGAGAATATCAACAATGGTAATTCGAATCAGATTAGCTCGTCCCGATGGCCGAAAGAAGAGATTGATGCTCTGATTCAGCTAAGGACTAATCTGCAGATGAAGTACCAAGATAATGGCCCTAAAGGTCCTCTCTGGGAGGAAATATCATTAGCCATGAAGAAACTTGGGTATGATAGAAGTGCAAAGAGGTGTAAAGAGAAATGGGAAAACATCAACAAATACTTCAAAAGAGTAAAGGAAAGCAACAAAAAGCGACCTGAGGATTCAAAGACATGTCCTTATTTCCAGCAGCTTGATGCATTGTACAAACAGAAATCCAAGAAAATTGTCAACAATCCAGCTAATCCAAATTACGAACTAAAACCCGAGGAACTATTGATGCACATGATGGGCGGCCAAGAAGAAAGCCACCAACCTGAATCAGCAACAGACGACGGTGAAGCTGAGAATGCCGATCAGAACCAAGAAGACGAAGATGAAGACGAAGATTATCAGATTGTGGCCAACAACAACAGTAATCAAATGGAAGTTAACTAG | 1470 | 43.47 | MLEISPSPENSTAVAAAVVNRAAEEDGAAASAGFSEDADRNWPGNRWPREETMALLKVRSSMDTAFRDASLKAPLWEEVSRKLAELGYNRNAKKCKEKFENIYKYHKRTKDGRSGKANGKNYRYFEQLEALDNNPLLPSQADSMEEIPRIIPNNVVHNAIPCSVVNPSANFVETTTTSISTSTTSCSSKESGGTRKKKRKFVEFFERLMNEVIEKQEKLQKKFVEALEKCEVERLAREEWKMQELARIKKERERLNQERSIAAAKDAAVLSFLKVFSEQVGTVQFPENLISVENLTEKQDDGNVDRNTSTQENINNGNSNQISSSRWPKEEIDALIQLRTNLQMKYQDNGPKGPLWEEISLAMKKLGYDRSAKRCKEKWENINKYFKRVKESNKKRPEDSKTCPYFQQLDALYKQKSKKIVNNPANPNYELKPEELLMHMMGGQEESHQPESATDDGEAENADQNQEDEDEDEDYQIVANNNSNQMEVN | 489 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 739814 | 741546 | + | CmPI595203_02g000720.1 | Cmu02g0072 | 408121 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g0072 | 489 | Coils | Coil | 202 | 229 | - | - | |
Cmu02g0072 | 489 | ProSiteProfiles | Myb-like domain profile. | 319 | 383 | IPR001005 | - | |
Cmu02g0072 | 489 | PANTHER | FI21293P1 | 38 | 463 | - | - | |
Cmu02g0072 | 489 | SMART | sant | 323 | 385 | IPR001005 | - | |
Cmu02g0072 | 489 | SMART | sant | 43 | 105 | IPR001005 | - | |
Cmu02g0072 | 489 | CDD | GT1 | 325 | 390 | - | - | |
Cmu02g0072 | 489 | Coils | Coil | 238 | 265 | - | - | |
Cmu02g0072 | 489 | Gene3D | - | 47 | 108 | - | - | |
Cmu02g0072 | 489 | Gene3D | - | 327 | 388 | - | - | |
Cmu02g0072 | 489 | ProSiteProfiles | Myb-like domain profile. | 45 | 103 | IPR001005 | - | |
Cmu02g0072 | 489 | MobiDBLite | consensus disorder prediction | 306 | 326 | - | - | |
Cmu02g0072 | 489 | Pfam | Myb/SANT-like DNA-binding domain | 45 | 131 | IPR044822 | - | |
Cmu02g0072 | 489 | Pfam | Myb/SANT-like DNA-binding domain | 325 | 412 | IPR044822 | - | |
Cmu02g0072 | 489 | MobiDBLite | consensus disorder prediction | 440 | 489 | - | - | |
Cmu02g0072 | 489 | FunFam | Trihelix transcription factor GT-2 | 47 | 108 | - | - | |
Cmu02g0072 | 489 | MobiDBLite | consensus disorder prediction | 296 | 326 | - | - | |
Cmu02g0072 | 489 | FunFam | Trihelix transcription factor GT-2 | 327 | 388 | - | - | |
Cmu02g0072 | 489 | MobiDBLite | consensus disorder prediction | 456 | 476 | - | - | |
Cmu02g0072 | 489 | CDD | GT1 | 45 | 110 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g1035 | Cmu-Chr1:15930410 | Cmu02g0072 | Cmu-Chr2:739814 | 9.80E-36 | dispersed | |
Cmu02g0072 | Cmu-Chr2:739814 | Cmu08g0331 | Cmu-Chr8:9317585 | 3.80E-97 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
5658 | PF13837 | Myb_DNA-bind_4 | 3.80E-22 | CL0123 | Cmu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g0072 | - | - | - | 0.0 |