Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0079 ATGGCAAAATCACCCGAAGATGAACACCCAATCAAGGCTTTCGGATGGGCTGCCCGAGATACATCCGGGTTACTCTCCCCCTTCCATTTCTCTAGAAGGGAAAATCGTGATGATGATGTCAGTATCAAAGTCCTTTACTGTGGGGTTTGCCATTCTGATCTACATTTGCTCAAGAATGATTGGGGTGTCACAAATTATCCAATTGTCCCAGGGCATGAGATTGTCGGTGTTGTGACCTCTGTTGGAAAGAATGTGAAGAAATTCAAAGCAGGCGATCAAGTTGGGGTTGGTGTCATAGTTGGATCTTGCAGAAGTTGTGAAAATTGTGAACAAGACTTGGAGAATTACTGCCCCAAGATGACATATACTTACAACTCACATTCATCTGATGGAGAAAAGACTTACGGTGGTTATTCTGATAAGATCGTTGTTGATCAGCATTTCGTTCTCCGATTTCCTGACAACTTACCCCTTGATGCTGGAGCTCCACTTCTTTGCGCTGGAATCACAATTTATAGCCCTATGAAATACTATGGAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGTCTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACCTCTCCAAGAAAGAAGGAGGAAGCCATTGACAGGCTCGGTGCCGATGCTTTCGTTGTTTCAAGTGATCCCCCACAATTAAAGGCCGCCATGGGGACGATGGATTACATTATCGACACGGTATCCGCTATCCATGCTCTTGCTCCATTGCTTGGTCTGCTAAAACTGAATGGAAAGTTGGTCACTGTGGGTTTACCTAACAAGCCCCTTGAGCTGCCAGTTGCTTCTCTAGTTCTCGGTAGGAGGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGTTGGATTTCTGTGCTCAGCACAACATCACAGCAGAGATTGAGCTCATTAAGATGGATGAAATTAACAAGGCCATCGAAAGACTTGCAAAAGCCGATGTTCGATACCGGTTCGTGATAGACATTGCAAACTCCTTGAAATAG 1077 44.75 MAKSPEDEHPIKAFGWAARDTSGLLSPFHFSRRENRDDDVSIKVLYCGVCHSDLHLLKNDWGVTNYPIVPGHEIVGVVTSVGKNVKKFKAGDQVGVGVIVGSCRSCENCEQDLENYCPKMTYTYNSHSSDGEKTYGGYSDKIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYGMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPPQLKAAMGTMDYIIDTVSAIHALAPLLGLLKLNGKLVTVGLPNKPLELPVASLVLGRRMVGGSNFGGLKETQEMLDFCAQHNITAEIELIKMDEINKAIERLAKADVRYRFVIDIANSLK 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 834258 837098 + CmPI595203_02g000790.1 Cmu02g0079 408128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0079 358 Gene3D - 16 353 - -
Cmu02g0079 358 FunFam probable cinnamyl alcohol dehydrogenase 16 176 - -
Cmu02g0079 358 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Cmu02g0079 358 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cmu02g0079 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Cmu02g0079 358 Gene3D - 167 323 - -
Cmu02g0079 358 SUPERFAMILY GroES-like 9 199 IPR011032 -
Cmu02g0079 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cmu02g0079 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Cmu02g0079 358 Pfam Alcohol dehydrogenase GroES-like domain 37 154 IPR013154 -
Cmu02g0079 358 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Cmu02g0079 358 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g0123 Cmu-Chr1:1105489 Cmu02g0079 Cmu-Chr2:834258 2.80E-102 dispersed
Cmu01g1770 Cmu-Chr1:31418762 Cmu02g0079 Cmu-Chr2:834258 2.20E-150 dispersed
Cmu02g0079 Cmu-Chr2:834258 Cmu05g1594 Cmu-Chr5:25588395 1.40E-120 dispersed
Cmu02g0078 Cmu-Chr2:821810 Cmu02g0079 Cmu-Chr2:834258 1.70E-179 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0079 K00083 - csv:101205228 600.512