Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0095 ATGGGTTCTAAATCCCAAGTCCTATTGAACCCACAAGCTTTGTTTGAAGATCATCAAGATCATGAAGTGGCAGCAAATTCTCAAATGGGTTTCTTCAATTTCCCTTCAAACTTAACTTTTCTCCAACTTCCTTCAATTCCTCAAACCCATTCTCCTTCCCCTCCATTTGATCCTCCAAATTTCTCCATTTCTAGTAATAATACTAATAATAATAACAATAATAGTAATTCCAATCTCAATGAAACCCTACTTTCTTCTTCTCTTTTGCCCCTCAAGCCCTCCCTTTCCTATGAATTTGCACCTCAACACCTCCTTTCCTTGCAAACATCCACTCCAAATCTATGGCCATGGGGAGAGATTGGAGAAAAGTTGATGAATGGGAAGAGATCAAATAATGAGAATCATCAATTGGGAGTGTCAACAATGAAGATGAAGAAAATGAAAGGAAGAAGAAAAGTGAGAGAACCAAGATTCTCATTCAAGACCATGAGCGATGTTGATGTTCTTGATGATGGTTACAAATGGCGAAAATACGGACAGAAAGTGGTCAAAAACACACAACATCCTAGAAGCTATTATCGTTGTACACAAGATCACTGTAGGGTAAAGAAACGAGTAGAAAGATTAGCTGAGGATCCAAGAATGGTGATTACAACTTATGAAGGAAGACATGTTCATTCTCCTTCCCATGATTCTGAAGACTCCGAAGCTCAAACCCATCTCAATAATTTCTTTTGGTAA 741 38.06 MGSKSQVLLNPQALFEDHQDHEVAANSQMGFFNFPSNLTFLQLPSIPQTHSPSPPFDPPNFSISSNNTNNNNNNSNSNLNETLLSSSLLPLKPSLSYEFAPQHLLSLQTSTPNLWPWGEIGEKLMNGKRSNNENHQLGVSTMKMKKMKGRRKVREPRFSFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDHCRVKKRVERLAEDPRMVITTYEGRHVHSPSHDSEDSEAQTHLNNFFW 246
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1079129 1081118 - CmPI595203_02g000950.1 Cmu02g0095 408144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0095 246 FunFam WRKY transcription factor 57 155 229 - -
Cmu02g0095 246 ProSiteProfiles WRKY domain profile. 164 229 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cmu02g0095 246 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 50 232 IPR044810 GO:0003700(InterPro)
Cmu02g0095 246 Gene3D WRKY domain 156 222 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cmu02g0095 246 MobiDBLite consensus disorder prediction 45 79 - -
Cmu02g0095 246 SMART WRKY_cls 169 228 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cmu02g0095 246 Pfam WRKY DNA -binding domain 170 226 IPR003657 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cmu02g0095 246 SUPERFAMILY WRKY DNA-binding domain 161 228 IPR036576 GO:0003700(InterPro)|GO:0006355(InterPro)|GO:0043565(InterPro)
Cmu02g0095 246 MobiDBLite consensus disorder prediction 60 79 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1543 Cmu-Chr1:29023635 Cmu02g0095 Cmu-Chr2:1079129 3.40E-46 dispersed
Cmu02g0095 Cmu-Chr2:1079129 Cmu08g0971 Cmu-Chr8:22005159 1.20E-27 dispersed
Cmu02g0095 Cmu-Chr2:1079129 Cmu02g0099 Cmu-Chr2:1132264 1.20E-19 proximal
Cmu05g0009 Cmu-Chr5:148472 Cmu02g0095 Cmu-Chr2:1079129 2.10E-32 transposed
Cmu01g1550 Cmu-Chr1:29119884 Cmu02g0095 Cmu-Chr2:1079129 1.90E-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5660 PF03106 WRKY 4.20E-24 CL0274 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0095 - - - 0.0