Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0113 ATGGCTTCTTCAAATCCCATCTCTCTTCTCACATTTCTCACTTTCCTCTTCCTCCTCTCTTCTTCATCTTCTGCTGTAGTTCCAACCGCAGAGATTTGCCAATCCACCGCCTCCCCGTCCTTCTGCAACTCTTTCCTTCCCAACTCCGCGGCCTCGGTCCACTCCCATTGTCGCTTCACTCTCCGCAATGCCCTCGACCATGCACATGCCTTCTTGGCACTCGTCGACTCTCACCTCAGCCTTTTCCCCTCCCTCTCCGCCCTCCACGACTGCCGTGGCCTCGCGGAAGCCAACCTCGACTTTATATCCCAAACTTTTTCCATAGTCAACTCCACAGCCATGGTCCTTCCTTATTACCAAGCCCATGAGATGGTGTCCTTAATGAGTGCAATGATCACCAATGAAGACACTTGTTATGACGGGTTGACGGGTTTAGGCTCGGCCTTGGGCTTGGTTGATAAGGTGTTGGAGGCCATCTCTTTTGATAGAAAGCTATATAGTTTGTACCTTTCGTTGTTCAAAATGGGTTGGGTTTCTGAGGACATGAAGGCTCCTATGTTGCCAAATATGAACCATTTTGGGGTCGGGAAAGGGCAGTTGAAGCTTAAAATGTCGCCCAAAGACCGAGCGTATTATGAGCGCTTGGTGCATAGGAAGAAGCCGGCGGCCGCTAGAAGGCTTCTTCAGACCAATTACCAAGATGATGGAATTTTAATCAATGGCATGGTTGCGGTGGATCAAAATGGAGCATACGATTTTACAACCATCAGCGACGCCATTGCGGCCGCTCCGAACAAGTCAGCTGTCGCTGACGGATACTTCTTGATCTTCGTGACCGCTGGGATTTACAATGAGAGTGTGTTGGTCCCAAAATATAAAAGGTATGTGTTGATGATGGGAGAAGGTAACAACCAAACTATCATCACCGGCAACAAAAACGTCATTGATGGTTCCACCACTTTCAATAGCGCAACCGTTGCCGTGGAGGGAATAGGGTTTTTCGGAGTAAACCTAACGATCAGCAACACGGCTGGGGCCGCCAAACACCAAGCGGTGGCATTGCGAGTAAGTGCCGACAATGTGACATTATATAGTTGCATATTCGAAGGCTATCAAGACACTCTCTACACACACTCCCTCCGTCAATTCTATAGAGAATGTGATATCTATGGTACTGTCGATTTCATCTTTGGCAATGCTGCCGTCGTTTTGCAAAACTGCAACATCTACGCCCGTCTCCCAATGAGTGGCCAGTTCAACGCCCTCACGGCGCAGGGCCGAACCGACCCCAATCAGAACACCGGAACCTCCATCCACAACTGCACCATCAAGCCGACGTCGGAGCTCGCGGCAAGCCCCGCCACGAAGAGCTACTTAGGGCGGCCGTGGAAGGAATATTCTCGGACAATTTATATGCAATCGTTTATTGATTCCTTTATTGATCCTGCAGGCTGGAAGGAGTGGGACGGCACTTTGAATTTAAACACTTCTTATTACGCCGAGTTTAATAACTCGGGGCCAGGCTCCGACACTTCACGGCGGGCTTCGTGGGTGGTCGGTGTCATCAACGCCACTGTTGCTAGTAACTTCACAGTGTCTCAATTCTTAGCTGGGGATCAATGGCTACCGCCTACCGCCGTGCCCTACACCGGTGGTTTGATATCATAA 1668 50.06 MASSNPISLLTFLTFLFLLSSSSSAVVPTAEICQSTASPSFCNSFLPNSAASVHSHCRFTLRNALDHAHAFLALVDSHLSLFPSLSALHDCRGLAEANLDFISQTFSIVNSTAMVLPYYQAHEMVSLMSAMITNEDTCYDGLTGLGSALGLVDKVLEAISFDRKLYSLYLSLFKMGWVSEDMKAPMLPNMNHFGVGKGQLKLKMSPKDRAYYERLVHRKKPAAARRLLQTNYQDDGILINGMVAVDQNGAYDFTTISDAIAAAPNKSAVADGYFLIFVTAGIYNESVLVPKYKRYVLMMGEGNNQTIITGNKNVIDGSTTFNSATVAVEGIGFFGVNLTISNTAGAAKHQAVALRVSADNVTLYSCIFEGYQDTLYTHSLRQFYRECDIYGTVDFIFGNAAVVLQNCNIYARLPMSGQFNALTAQGRTDPNQNTGTSIHNCTIKPTSELAASPATKSYLGRPWKEYSRTIYMQSFIDSFIDPAGWKEWDGTLNLNTSYYAEFNNSGPGSDTSRRASWVVGVINATVASNFTVSQFLAGDQWLPPTAVPYTGGLIS 555
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1263820 1267282 + CmPI595203_02g001130.1 Cmu02g0113 408162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0113 555 Pfam Plant invertase/pectin methylesterase inhibitor 31 167 IPR006501 GO:0004857(InterPro)
Cmu02g0113 555 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 175 IPR035513 -
Cmu02g0113 555 CDD PMEI-like_3 32 177 - -
Cmu02g0113 555 Gene3D - 241 555 IPR012334 -
Cmu02g0113 555 Gene3D Invertase/pectin methylesterase inhibitor family protein 30 175 IPR035513 -
Cmu02g0113 555 PANTHER PECTINESTERASE 13 544 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cmu02g0113 555 SUPERFAMILY Pectin lyase-like 240 552 IPR011050 -
Cmu02g0113 555 ProSitePatterns Pectinesterase signature 2. 389 398 IPR033131 -
Cmu02g0113 555 Pfam Pectinesterase 243 539 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Cmu02g0113 555 SMART PMEI_2 22 172 IPR006501 GO:0004857(InterPro)
Cmu02g0113 555 FunFam Pectinesterase 238 553 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0113 Cmu-Chr2:1263820 Cmu11g1453 Cmu-Chr11:26756742 6.50E-146 dispersed
Cmu02g0113 Cmu-Chr2:1263820 Cmu09g0533 Cmu-Chr9:4885348 3.60E-160 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0113 K01051 - csv:101216984 942.954