Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g0127 | ATGGGTTGGAAGAGATCTTCGAGGAACGGCAATTTGAGGATCTGGGTGCAGGTTTTAGTCGGATTCGTGATCTGCGCAGCCCAAGTTCTTTTCGGAATTACGAATCCAGGGGATTTTTCTGCTATTAGTAGCTTACATACCGCACTGGGACTCCCCAGTCTTCCTGGATGGGGCATCGGGCAAGACCCATGCGGAGACGCATGGCAGGGTGTTGTGTGTAATGATTCGAGCATCATTAAAATAATCATTAATGCTGCTAATTTGGGAGGTGAACTTGGTGACAACTTGGGATTGTTTTCTTCGATTCAAACAATTGATTTAAGCAACAATCATATAGGGGGAAGTATACCATCCAGTTTACCTGTTACCATGCAGAACTTTTTTCTTTCAGCTAATGAGTTCACGGGAAGTATTCCGAGTTCATTATCATCTTTGATTCAACTGACAGCGATGTCGTTGAATGATAACAAATTAAGTGGACAAATACCAGATTCCTTTGAAGCCATTTCTCAATTGGTCAATTTAGACTTGTCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTGTAAGCAATTTATTGGCATTGACCACCCTGCATTTGCAGAACAATCAGCTGTCGGGGACCCTTGATGTTCTACAAGACCTTCCACTGAAAGACTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGGTGCTGAGTATCCCTAATTTTAGAAAGGATGGAAATCCATTTAATTCTTCTGTTTCGCCGACATCTCCTCCTGTATCTCCTTCTCCACCATCAAAGCCAGCACCAGCACCGCCAGTTTCTGGAGCACCACCAGTTTCTGGAGCACCACCATCTTCTCAACAAAAACCTAAGAAACAGGCTGATGGACCATCGGCACCAGAGGAATCCAGTTCTGGAAAAAATAAGAAAAGCACTAAAAGGGTTGTTTTAATAACAATTGCAGTGGTTTTGTCATTCATAATTTTGGTCTTGGCATGTGTGCTCTTTATGCCAAGGTGCAGAAGAAGAAGAGTTGATAGTGTATCCAAGCGACATCAGATAGGTGCTTATAGAGGTGAGAGAGAGAATGCTGGAAATCAGGGAGCCATGCCCCATACAAATGATCAGATTCCTAAAGTTCCAAAAGAGCCAGTTGTAAGGCCGAAGCAGGAAACTCAAACAGAGGTTCAGAAGGTTCCAAAAGATCATGAAGAGAGAAAGAAAAACATGCCAAGAATGAGCGCTATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCTCCCCCTCCCCCACCACCTCCCCCTCCTCCTCCCCCTCCCCCTCCCCCTCCCCCTCCTGTTGAAGAGGTCACTGCCGTGCCCATTGTTCCAGCCGAAGTTCCTCCCTTGAAGCCTCTCACTAAACATAGAATTACCTCAACTTTTGCAAAATCTTTTACCATTGCGTCCCTTCAGCAATATACAAACAGCTTTTCACAAGAGAATCTTCTAGGAGAAGGAATGCTGGGGAGTGTTTATAGGGCACAGCTTCCCAGTGGGAAGTTACTGGCCGTCAAGAAACTGGATAAGAGAGCATTCAGTCAGCAAAAGGATGATGAATTTCTTGAGTTAGTGAATAATATCGATAGAATCAGGCATGCTAATGTGGTCGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTATGAGTATTGTAGTGGTGGAACATTGCAGGATGCACTGCACTCAGATGAAGAGTTCAGAAAGAAACTTTCGTGGAATGCCCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCTCCTGTTATTCATAGGAATTTCAAGTCTGCGAATGTCCTACTTGATGATGATCTTTCAGTGCGTGTTTCAGATTGTGGGCTGGCTCCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCTGGTCAGCTTCTGACAGCATATGGTTACGGAGCGCCAGAATTTGAATCAGGAGTTTATACACTTGAGAGTGACGTTTACAGCTTCGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGACAGAACAAGGACCCGAGGTGAGCAGTTCCTAGTCAGGTGGGCGATTCCACAGCTTCACGACATAGAGGCATTGACAAGCATGGTTGATCCTTCACTCAATGGTCAATACCCTGCCAAATCCTTATCGTACTTTGCCGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCAATGTCGTCGGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACTTGGCAGTGGTTCAAAAGACGATGCGAAGATCTTCGAGCATCCAATGGTAACATGCTCAAGTTTTGCAAACCGAACTTGCCAGCCATTCGTCTTCTTCCTTTTGGTTTGTCTAAAGAGAACACTTTCTAGCAACAGAGCTCCAATTCTTGTGATCTTCCTAATGAGTCGATACGATTCCAATCCTTTCGACGAAGACGTCAATCCATTTTCTAATCCTGGAGTTGGAAGTGTTCCACCTGCAAACACGAGGCTCTCACCTCTTCCCCCTGAAACTTATGATCGTGGTGCAACAATTGACATTCCTCTTGATACTGCAAAGGATTTAAAAGCTAAGGAGAAGGAGCTTCAAGCTAAAGAAGCTGAATTAAAGAAGAGGGAACAGGAATTAAAACGGAGGGAAGATGCCATTTCAAGAGCTGGAATTATCATAGAGGAGAAAAATTGGCCACCATTTTTTCCCCTTATCCATCATGATATTGCAAATGAAATACCGATCCATCTACAAACCATTCAGTATGTTGCCTTCACAACATTGTTGGGTTTGGTTGTGTGCCTTTTGTGGAACATTGTAGCAGTTACAACTGCTTGGATCAATGGTGAAGGTCCAACAATATGGTTCCTTGCGATCATCTACTTCATATCAGGTGTACCTGGAGCATATGTTGGGTGGTATCGTCCTCTCTATCGTGCTACTAGGACCGATAGTGCTCTGAAGTTTGGGTGGTTTTTCCTAGTTTACCTGATTCATATTGGCTTCTGCGTCTTTTCTGCAGTTGCTCCTCCCATTATATTTAAGGGGAAATCTCTTACAGGGATCTTACCTGCTATAGATCTGTTGAGTAGTAGTGCTTTGGTTGGGATATTCTACTTCATTGGTTTTGCATTCTTCTGCATTGAATCACTAATCAGCATATGGGTTATCCAGCAAGTATACATGTATTTTCGAGGTAGCGGTAAGGCTGCGGAAATGAAACGTGAAGCCGCCATGGGAACTCTGAGGGCAGCTTTTTGA | 3360 | 44.2 | MGWKRSSRNGNLRIWVQVLVGFVICAAQVLFGITNPGDFSAISSLHTALGLPSLPGWGIGQDPCGDAWQGVVCNDSSIIKIIINAANLGGELGDNLGLFSSIQTIDLSNNHIGGSIPSSLPVTMQNFFLSANEFTGSIPSSLSSLIQLTAMSLNDNKLSGQIPDSFEAISQLVNLDLSNNNLSGPLPPSVSNLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKVLSIPNFRKDGNPFNSSVSPTSPPVSPSPPSKPAPAPPVSGAPPVSGAPPSSQQKPKKQADGPSAPEESSSGKNKKSTKRVVLITIAVVLSFIILVLACVLFMPRCRRRRVDSVSKRHQIGAYRGERENAGNQGAMPHTNDQIPKVPKEPVVRPKQETQTEVQKVPKDHEERKKNMPRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPPPPPPVEEVTAVPIVPAEVPPLKPLTKHRITSTFAKSFTIASLQQYTNSFSQENLLGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSGGTLQDALHSDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGQYPAKSLSYFADIISKCVQSEPEFRPPMSSVVQDLLNMIRREPLGSGSKDDAKIFEHPMVTCSSFANRTCQPFVFFLLVCLKRTLSSNRAPILVIFLMSRYDSNPFDEDVNPFSNPGVGSVPPANTRLSPLPPETYDRGATIDIPLDTAKDLKAKEKELQAKEAELKKREQELKRREDAISRAGIIIEEKNWPPFFPLIHHDIANEIPIHLQTIQYVAFTTLLGLVVCLLWNIVAVTTAWINGEGPTIWFLAIIYFISGVPGAYVGWYRPLYRATRTDSALKFGWFFLVYLIHIGFCVFSAVAPPIIFKGKSLTGILPAIDLLSSSALVGIFYFIGFAFFCIESLISIWVIQQVYMYFRGSGKAAEMKREAAMGTLRAAF | 1119 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1354939 | 1368786 | + | CmPI595203_02g001270.1 | Cmu02g0127 | 408176 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g0127 | 1119 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 76 | 776 | IPR051420 | - | |
Cmu02g0127 | 1119 | MobiDBLite | consensus disorder prediction | 358 | 410 | - | - | |
Cmu02g0127 | 1119 | MobiDBLite | consensus disorder prediction | 255 | 280 | - | - | |
Cmu02g0127 | 1119 | Pfam | SCAMP family | 928 | 1099 | IPR007273 | GO:0015031(InterPro)|GO:0016020(InterPro) | |
Cmu02g0127 | 1119 | MobiDBLite | consensus disorder prediction | 281 | 306 | - | - | |
Cmu02g0127 | 1119 | Gene3D | Phosphorylase Kinase; domain 1 | 471 | 577 | - | - | |
Cmu02g0127 | 1119 | MobiDBLite | consensus disorder prediction | 433 | 457 | - | - | |
Cmu02g0127 | 1119 | Gene3D | Transferase(Phosphotransferase) domain 1 | 579 | 782 | - | - | |
Cmu02g0127 | 1119 | MobiDBLite | consensus disorder prediction | 432 | 457 | - | - | |
Cmu02g0127 | 1119 | MobiDBLite | consensus disorder prediction | 247 | 312 | - | - | |
Cmu02g0127 | 1119 | Gene3D | Ribonuclease Inhibitor | 39 | 256 | IPR032675 | - | |
Cmu02g0127 | 1119 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 3 | 35 | 260 | - | - | |
Cmu02g0127 | 1119 | SUPERFAMILY | Formin homology 2 domain (FH2 domain) | 445 | 455 | - | - | |
Cmu02g0127 | 1119 | Coils | Coil | 888 | 918 | - | - | |
Cmu02g0127 | 1119 | SUPERFAMILY | Protein kinase-like (PK-like) | 476 | 774 | IPR011009 | - | |
Cmu02g0127 | 1119 | FunFam | protein STRUBBELIG-RECEPTOR FAMILY 8 | 578 | 787 | - | - | |
Cmu02g0127 | 1119 | SUPERFAMILY | L domain-like | 54 | 241 | - | - | |
Cmu02g0127 | 1119 | FunFam | Protein STRUBBELIG-RECEPTOR FAMILY 8 | 470 | 577 | - | - | |
Cmu02g0127 | 1119 | Pfam | Leucine Rich Repeat | 101 | 120 | IPR001611 | GO:0005515(InterPro) | |
Cmu02g0127 | 1119 | Pfam | Leucine Rich Repeat | 172 | 193 | IPR001611 | GO:0005515(InterPro) | |
Cmu02g0127 | 1119 | MobiDBLite | consensus disorder prediction | 383 | 410 | - | - | |
Cmu02g0127 | 1119 | ProSiteProfiles | Protein kinase domain profile. | 500 | 799 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu02g0127 | 1119 | Pfam | Protein tyrosine and serine/threonine kinase | 503 | 774 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g0127 | Cmu-Chr2:1354939 | Cmu07g1401 | Cmu-Chr7:29264052 | 2.30E-105 | dispersed | |
Cmu01g2209 | Cmu-Chr1:34517876 | Cmu02g0127 | Cmu-Chr2:1354939 | 3.30E-112 | transposed | |
Cmu10g0970 | Cmu-Chr10:1633239 | Cmu02g0127 | Cmu-Chr2:1354939 | 4.30E-79 | transposed | |
Cmu01g2223 | Cmu-Chr1:34640195 | Cmu02g0127 | Cmu-Chr2:1354939 | 2.10E-134 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75274 | PF07714 | PK_Tyr_Ser-Thr | 2.90E-42 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g0127 | - | - | - | 0.0 |