Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0127 ATGGGTTGGAAGAGATCTTCGAGGAACGGCAATTTGAGGATCTGGGTGCAGGTTTTAGTCGGATTCGTGATCTGCGCAGCCCAAGTTCTTTTCGGAATTACGAATCCAGGGGATTTTTCTGCTATTAGTAGCTTACATACCGCACTGGGACTCCCCAGTCTTCCTGGATGGGGCATCGGGCAAGACCCATGCGGAGACGCATGGCAGGGTGTTGTGTGTAATGATTCGAGCATCATTAAAATAATCATTAATGCTGCTAATTTGGGAGGTGAACTTGGTGACAACTTGGGATTGTTTTCTTCGATTCAAACAATTGATTTAAGCAACAATCATATAGGGGGAAGTATACCATCCAGTTTACCTGTTACCATGCAGAACTTTTTTCTTTCAGCTAATGAGTTCACGGGAAGTATTCCGAGTTCATTATCATCTTTGATTCAACTGACAGCGATGTCGTTGAATGATAACAAATTAAGTGGACAAATACCAGATTCCTTTGAAGCCATTTCTCAATTGGTCAATTTAGACTTGTCCAATAACAACTTGAGTGGGCCACTGCCTCCATCTGTAAGCAATTTATTGGCATTGACCACCCTGCATTTGCAGAACAATCAGCTGTCGGGGACCCTTGATGTTCTACAAGACCTTCCACTGAAAGACTTGAATATAGAGAACAACCTTTTTTCTGGACCCATACCTGAGAAGGTGCTGAGTATCCCTAATTTTAGAAAGGATGGAAATCCATTTAATTCTTCTGTTTCGCCGACATCTCCTCCTGTATCTCCTTCTCCACCATCAAAGCCAGCACCAGCACCGCCAGTTTCTGGAGCACCACCAGTTTCTGGAGCACCACCATCTTCTCAACAAAAACCTAAGAAACAGGCTGATGGACCATCGGCACCAGAGGAATCCAGTTCTGGAAAAAATAAGAAAAGCACTAAAAGGGTTGTTTTAATAACAATTGCAGTGGTTTTGTCATTCATAATTTTGGTCTTGGCATGTGTGCTCTTTATGCCAAGGTGCAGAAGAAGAAGAGTTGATAGTGTATCCAAGCGACATCAGATAGGTGCTTATAGAGGTGAGAGAGAGAATGCTGGAAATCAGGGAGCCATGCCCCATACAAATGATCAGATTCCTAAAGTTCCAAAAGAGCCAGTTGTAAGGCCGAAGCAGGAAACTCAAACAGAGGTTCAGAAGGTTCCAAAAGATCATGAAGAGAGAAAGAAAAACATGCCAAGAATGAGCGCTATTCCAAAGAAGGATCATCATGAAGTAGATATGAGCGCACTCGATGTCTATCTAATGCCTCCCCCTCCCCCACCACCTCCCCCTCCTCCTCCCCCTCCCCCTCCCCCTCCCCCTCCTGTTGAAGAGGTCACTGCCGTGCCCATTGTTCCAGCCGAAGTTCCTCCCTTGAAGCCTCTCACTAAACATAGAATTACCTCAACTTTTGCAAAATCTTTTACCATTGCGTCCCTTCAGCAATATACAAACAGCTTTTCACAAGAGAATCTTCTAGGAGAAGGAATGCTGGGGAGTGTTTATAGGGCACAGCTTCCCAGTGGGAAGTTACTGGCCGTCAAGAAACTGGATAAGAGAGCATTCAGTCAGCAAAAGGATGATGAATTTCTTGAGTTAGTGAATAATATCGATAGAATCAGGCATGCTAATGTGGTCGAGCTCAGTGGTTACTGTGCAGAGCATGGTGAAAGGCTTCTTATCTATGAGTATTGTAGTGGTGGAACATTGCAGGATGCACTGCACTCAGATGAAGAGTTCAGAAAGAAACTTTCGTGGAATGCCCGCATTAGAATGGCTCTTGGGGCTGCAAGAGCCTTGGAGTATCTGCATGAGGTCTGTCAGCCTCCTGTTATTCATAGGAATTTCAAGTCTGCGAATGTCCTACTTGATGATGATCTTTCAGTGCGTGTTTCAGATTGTGGGCTGGCTCCATTAATATCAAAAGGAGCTGTTAGTCAGCTATCTGGTCAGCTTCTGACAGCATATGGTTACGGAGCGCCAGAATTTGAATCAGGAGTTTATACACTTGAGAGTGACGTTTACAGCTTCGGTGTGGTTATGCTGGAACTTCTAACTGGCCGGATGTCTTATGACAGAACAAGGACCCGAGGTGAGCAGTTCCTAGTCAGGTGGGCGATTCCACAGCTTCACGACATAGAGGCATTGACAAGCATGGTTGATCCTTCACTCAATGGTCAATACCCTGCCAAATCCTTATCGTACTTTGCCGATATCATATCAAAATGTGTTCAGTCGGAGCCTGAATTCCGGCCACCAATGTCGTCGGTTGTTCAGGACTTGCTCAACATGATAAGGAGAGAACCACTTGGCAGTGGTTCAAAAGACGATGCGAAGATCTTCGAGCATCCAATGGTAACATGCTCAAGTTTTGCAAACCGAACTTGCCAGCCATTCGTCTTCTTCCTTTTGGTTTGTCTAAAGAGAACACTTTCTAGCAACAGAGCTCCAATTCTTGTGATCTTCCTAATGAGTCGATACGATTCCAATCCTTTCGACGAAGACGTCAATCCATTTTCTAATCCTGGAGTTGGAAGTGTTCCACCTGCAAACACGAGGCTCTCACCTCTTCCCCCTGAAACTTATGATCGTGGTGCAACAATTGACATTCCTCTTGATACTGCAAAGGATTTAAAAGCTAAGGAGAAGGAGCTTCAAGCTAAAGAAGCTGAATTAAAGAAGAGGGAACAGGAATTAAAACGGAGGGAAGATGCCATTTCAAGAGCTGGAATTATCATAGAGGAGAAAAATTGGCCACCATTTTTTCCCCTTATCCATCATGATATTGCAAATGAAATACCGATCCATCTACAAACCATTCAGTATGTTGCCTTCACAACATTGTTGGGTTTGGTTGTGTGCCTTTTGTGGAACATTGTAGCAGTTACAACTGCTTGGATCAATGGTGAAGGTCCAACAATATGGTTCCTTGCGATCATCTACTTCATATCAGGTGTACCTGGAGCATATGTTGGGTGGTATCGTCCTCTCTATCGTGCTACTAGGACCGATAGTGCTCTGAAGTTTGGGTGGTTTTTCCTAGTTTACCTGATTCATATTGGCTTCTGCGTCTTTTCTGCAGTTGCTCCTCCCATTATATTTAAGGGGAAATCTCTTACAGGGATCTTACCTGCTATAGATCTGTTGAGTAGTAGTGCTTTGGTTGGGATATTCTACTTCATTGGTTTTGCATTCTTCTGCATTGAATCACTAATCAGCATATGGGTTATCCAGCAAGTATACATGTATTTTCGAGGTAGCGGTAAGGCTGCGGAAATGAAACGTGAAGCCGCCATGGGAACTCTGAGGGCAGCTTTTTGA 3360 44.2 MGWKRSSRNGNLRIWVQVLVGFVICAAQVLFGITNPGDFSAISSLHTALGLPSLPGWGIGQDPCGDAWQGVVCNDSSIIKIIINAANLGGELGDNLGLFSSIQTIDLSNNHIGGSIPSSLPVTMQNFFLSANEFTGSIPSSLSSLIQLTAMSLNDNKLSGQIPDSFEAISQLVNLDLSNNNLSGPLPPSVSNLLALTTLHLQNNQLSGTLDVLQDLPLKDLNIENNLFSGPIPEKVLSIPNFRKDGNPFNSSVSPTSPPVSPSPPSKPAPAPPVSGAPPVSGAPPSSQQKPKKQADGPSAPEESSSGKNKKSTKRVVLITIAVVLSFIILVLACVLFMPRCRRRRVDSVSKRHQIGAYRGERENAGNQGAMPHTNDQIPKVPKEPVVRPKQETQTEVQKVPKDHEERKKNMPRMSAIPKKDHHEVDMSALDVYLMPPPPPPPPPPPPPPPPPPPPVEEVTAVPIVPAEVPPLKPLTKHRITSTFAKSFTIASLQQYTNSFSQENLLGEGMLGSVYRAQLPSGKLLAVKKLDKRAFSQQKDDEFLELVNNIDRIRHANVVELSGYCAEHGERLLIYEYCSGGTLQDALHSDEEFRKKLSWNARIRMALGAARALEYLHEVCQPPVIHRNFKSANVLLDDDLSVRVSDCGLAPLISKGAVSQLSGQLLTAYGYGAPEFESGVYTLESDVYSFGVVMLELLTGRMSYDRTRTRGEQFLVRWAIPQLHDIEALTSMVDPSLNGQYPAKSLSYFADIISKCVQSEPEFRPPMSSVVQDLLNMIRREPLGSGSKDDAKIFEHPMVTCSSFANRTCQPFVFFLLVCLKRTLSSNRAPILVIFLMSRYDSNPFDEDVNPFSNPGVGSVPPANTRLSPLPPETYDRGATIDIPLDTAKDLKAKEKELQAKEAELKKREQELKRREDAISRAGIIIEEKNWPPFFPLIHHDIANEIPIHLQTIQYVAFTTLLGLVVCLLWNIVAVTTAWINGEGPTIWFLAIIYFISGVPGAYVGWYRPLYRATRTDSALKFGWFFLVYLIHIGFCVFSAVAPPIIFKGKSLTGILPAIDLLSSSALVGIFYFIGFAFFCIESLISIWVIQQVYMYFRGSGKAAEMKREAAMGTLRAAF 1119
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 1354939 1368786 + CmPI595203_02g001270.1 Cmu02g0127 408176
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0127 1119 PANTHER LEUCINE RICH REPEAT KINASE 2 76 776 IPR051420 -
Cmu02g0127 1119 MobiDBLite consensus disorder prediction 358 410 - -
Cmu02g0127 1119 MobiDBLite consensus disorder prediction 255 280 - -
Cmu02g0127 1119 Pfam SCAMP family 928 1099 IPR007273 GO:0015031(InterPro)|GO:0016020(InterPro)
Cmu02g0127 1119 MobiDBLite consensus disorder prediction 281 306 - -
Cmu02g0127 1119 Gene3D Phosphorylase Kinase; domain 1 471 577 - -
Cmu02g0127 1119 MobiDBLite consensus disorder prediction 433 457 - -
Cmu02g0127 1119 Gene3D Transferase(Phosphotransferase) domain 1 579 782 - -
Cmu02g0127 1119 MobiDBLite consensus disorder prediction 432 457 - -
Cmu02g0127 1119 MobiDBLite consensus disorder prediction 247 312 - -
Cmu02g0127 1119 Gene3D Ribonuclease Inhibitor 39 256 IPR032675 -
Cmu02g0127 1119 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 35 260 - -
Cmu02g0127 1119 SUPERFAMILY Formin homology 2 domain (FH2 domain) 445 455 - -
Cmu02g0127 1119 Coils Coil 888 918 - -
Cmu02g0127 1119 SUPERFAMILY Protein kinase-like (PK-like) 476 774 IPR011009 -
Cmu02g0127 1119 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 578 787 - -
Cmu02g0127 1119 SUPERFAMILY L domain-like 54 241 - -
Cmu02g0127 1119 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 470 577 - -
Cmu02g0127 1119 Pfam Leucine Rich Repeat 101 120 IPR001611 GO:0005515(InterPro)
Cmu02g0127 1119 Pfam Leucine Rich Repeat 172 193 IPR001611 GO:0005515(InterPro)
Cmu02g0127 1119 MobiDBLite consensus disorder prediction 383 410 - -
Cmu02g0127 1119 ProSiteProfiles Protein kinase domain profile. 500 799 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cmu02g0127 1119 Pfam Protein tyrosine and serine/threonine kinase 503 774 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0127 Cmu-Chr2:1354939 Cmu07g1401 Cmu-Chr7:29264052 2.30E-105 dispersed
Cmu01g2209 Cmu-Chr1:34517876 Cmu02g0127 Cmu-Chr2:1354939 3.30E-112 transposed
Cmu10g0970 Cmu-Chr10:1633239 Cmu02g0127 Cmu-Chr2:1354939 4.30E-79 transposed
Cmu01g2223 Cmu-Chr1:34640195 Cmu02g0127 Cmu-Chr2:1354939 2.10E-134 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
75274 PF07714 PK_Tyr_Ser-Thr 2.90E-42 CL0016 Cmu PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0127 - - - 0.0