Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cmu02g0179 | ATGATTTTCCTTTATGTGCAACGGGACCTGGTTCAGTACGCCTATTCCACACCATTCGAGGACCTCTTTTCCTCTTATGATGATGTAGACTCATTAGGACTTGCTAGCTCAAGCCAAGCTCAGCTAGAGCTTGACTACTATGGAAAGAGCTGCCCTCGTGCTGAGAAAATCGTCTATGATTACGTTTACAAGAACATTCCCAAGGTTCCTACCTTGGCTTCTGCCTTACTTAGAATGCATTTCCACGACTGCTTCGTTCGGGGTTGTGATGCATCTGTACTTTTGAACTCAACTACGAACAACCAAAGTGAGAAAGTATCTCCACCAAATCTAACACTGAGAGGCTTCGACTTCATTGATAAAATTAAGAAACTTTTGGAAGCTGAATGCCCTGGAGTCGTCTCCTGCGCCGACATTATTTCTTTAGTTGCAAGAGACTCCGTCGTTGCTATCGGCGGTCCATTCTGGAGGGTTCCGACCGGAAGGAGAGATGGTTTGATCTCAAGATCCACAGAAGCTTTGGTGAACATTCCTCCACCGTTTGCCAATTTGTCAACTCTACAACAACAATTCGCTAACAAGGGTCTTGATCTCAAAGACTTGGTTTTGCTTTCAGGAGCGCACACAATTGGGGTATCTCACTGCTCGTCCTTTACGCGGCGGCTCTACAACTTCACCGGCGTGGGAGATCAAGACCCATCACTTGACAGTCAGTACGCCGCAAATCTCAAGGCAAACAAATGCAAAAGCATTAGCGCCAACGGCATTGTGGAAATGGACCCTGGCAGTTTCAAAACCTTCGATCTCAGCTACTACTCCCTTCTTCTGAAGCGCCGAGGGCTGTTCCAGTCCGACGCGGCTCTGACCACCAGCGCAGCCACCAAGGCCTTCGTCACCGACCTGCTCAATGGCTCCGTTCAGAACTTTTTCGCCCAGTTTGGGTTAGCCATGGAGAAGATGGGTCGCATAGGGGTCAAGACTGGGTCCGAGGGTGAGATTCGCAACCACTGCGCTTTTCCCGCCATTGCTTTGCAACGAAGGAAAAATCTAAAGCTGCAAAAAAGAGGAGAAATAAAAACCCCTCATCTCGGTGTTCGTCCAAGCGGTCGGCGTTTTCCTTCAGATAGCTCAGAAAGTTCAGCTCTCGCAATTGACAAGCCATCGAATCTGTTCTATTCTATTATTTTTGCATATTTTCCGATTTTTGGCAATCTTTGTAAGCGAATTTCATCGTCTGAACTACTCCAATTCGGTTCTACATCTATTCTTTCTGATTCGTCGTTGCAAGTACAAACGGCGATTACTGCGACTTCCAATACATACTTCTTCTCTGTTATTGTTCATAAAGGCCACTGTTCTCGCCCAAGTTGCTCCTTTGCTCACGGGAACGCTGAACTCAGACGATTTGCTGGTGGTTCTACCGGTAGACAGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGACATTCTCCCCTGCAGGAAAGGGATTCTAGAGGGCGACATGGACCTCGTGTTGCAGAGTATAGCTCATCTTGGTCACTTGAACGACATAGTGACCGTAAGAGGAGGAAAAAGGAACTTGGGGATCCCCGTCGTGATTATTCTGGAAATTTGAGGATTTCAGATAGAAATGAAGAAGAAGATAGAGAAGGGAAAACCTTGTTTACTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGACAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTACCTAGACGAGAAAATTCAAGAAGTGGATAGTTTGACTTCTAGAATTCAGGAGCTAGAATCTCAATTACATAAAGAGAGGCAGGAGTGTAGAAGGATCAAATCAAAAATCAAGAAGTTTGTCAAAGCACATAATCGTTACTCAAGGTTGCAAGATGAACTGAAACGATCGCAAGTCCGACTTCAACAGTTGGGAGATCAGCTGGGGCCAGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATACGTCAGGCCCTTTTCATGACCTGCAAAAAGACACTTCTGTAAGCAAGAGGAAGATGCATGCTGTTCAAGATACTGCAGAGAACTCAAATCGAGCTGATTTAAACAAAGGAAATAAAGAGGCAGTGGTGAGAAGGATCTCTCGGTGGAATGCCCATCCTGCTAAATCAGTATATAGCAAAATTGAAGCGGTCGGCAGTGAAATCAGTGATCTGATACCTGCAGCAAATGAAAGCAGGCAGAAGAGGGGAAGGACATCTAGTAGTGTTTCTACTGCGGACAAGGTTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCATTAACCAGCATGGCTGCCCATGCAGTTGATGAGGAAGTTGATATTGACTTGGAAATCAACAATGAAGTGAAAGAACCGAGGGAAAGTACTAAGGAGGCTGCGTCAGGCGGCCTGCCTTTCTTTCCCCCTCCACCACCTCCTCCAATCCGTGAATTCAACCATTCAAGGTATGAGGGTGAAGATCAAAATGTAGATGTGGAGGTGGTTGATGATGAAAGGGAAGGTATGGACGATGCTTAA | 2604 | 45.81 | MIFLYVQRDLVQYAYSTPFEDLFSSYDDVDSLGLASSSQAQLELDYYGKSCPRAEKIVYDYVYKNIPKVPTLASALLRMHFHDCFVRGCDASVLLNSTTNNQSEKVSPPNLTLRGFDFIDKIKKLLEAECPGVVSCADIISLVARDSVVAIGGPFWRVPTGRRDGLISRSTEALVNIPPPFANLSTLQQQFANKGLDLKDLVLLSGAHTIGVSHCSSFTRRLYNFTGVGDQDPSLDSQYAANLKANKCKSISANGIVEMDPGSFKTFDLSYYSLLLKRRGLFQSDAALTTSAATKAFVTDLLNGSVQNFFAQFGLAMEKMGRIGVKTGSEGEIRNHCAFPAIALQRRKNLKLQKRGEIKTPHLGVRPSGRRFPSDSSESSALAIDKPSNLFYSIIFAYFPIFGNLCKRISSSELLQFGSTSILSDSSLQVQTAITATSNTYFFSVIVHKGHCSRPSCSFAHGNAELRRFAGGSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPRVAEYSSSWSLERHSDRKRRKKELGDPRRDYSGNLRISDRNEEEDREGKTLFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLHKERQECRRIKSKIKKFVKAHNRYSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHTSGPFHDLQKDTSVSKRKMHAVQDTAENSNRADLNKGNKEAVVRRISRWNAHPAKSVYSKIEAVGSEISDLIPAANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGGLPFFPPPPPPPIREFNHSRYEGEDQNVDVEVVDDEREGMDDA | 867 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 1703988 | 1715868 | - | CmPI595203_02g001790.1 | Cmu02g0179 | 408228 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cmu02g0179 | 867 | Gene3D | - | 46 | 338 | - | - | |
| Cmu02g0179 | 867 | PANTHER | ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 | 447 | 865 | IPR045868 | GO:0046872(InterPro) | |
| Cmu02g0179 | 867 | Coils | Coil | 561 | 581 | - | - | |
| Cmu02g0179 | 867 | ProSitePatterns | Peroxidases proximal heme-ligand signature. | 200 | 210 | IPR019793 | - | |
| Cmu02g0179 | 867 | ProSitePatterns | Peroxidases active site signature. | 73 | 84 | IPR019794 | GO:0004601(InterPro) | |
| Cmu02g0179 | 867 | MobiDBLite | consensus disorder prediction | 516 | 555 | - | - | |
| Cmu02g0179 | 867 | MobiDBLite | consensus disorder prediction | 472 | 555 | - | - | |
| Cmu02g0179 | 867 | SUPERFAMILY | Heme-dependent peroxidases | 41 | 339 | IPR010255 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | Coils | Coil | 589 | 623 | - | - | |
| Cmu02g0179 | 867 | ProSiteProfiles | Plant heme peroxidase family profile. | 41 | 341 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | Coils | Coil | 634 | 654 | - | - | |
| Cmu02g0179 | 867 | Gene3D | Peroxidase, domain 2 | 178 | 320 | - | - | |
| Cmu02g0179 | 867 | MobiDBLite | consensus disorder prediction | 479 | 506 | - | - | |
| Cmu02g0179 | 867 | MobiDBLite | consensus disorder prediction | 808 | 867 | - | - | |
| Cmu02g0179 | 867 | PRINTS | Haem peroxidase superfamily signature | 134 | 151 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Haem peroxidase superfamily signature | 260 | 275 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Haem peroxidase superfamily signature | 152 | 164 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Haem peroxidase superfamily signature | 200 | 215 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Haem peroxidase superfamily signature | 73 | 87 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Plant peroxidase signature | 114 | 127 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Plant peroxidase signature | 75 | 95 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Plant peroxidase signature | 152 | 167 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Plant peroxidase signature | 315 | 328 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Plant peroxidase signature | 51 | 70 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Plant peroxidase signature | 133 | 143 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Plant peroxidase signature | 274 | 291 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Plant peroxidase signature | 258 | 273 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | PRINTS | Plant peroxidase signature | 199 | 211 | IPR000823 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | Pfam | Peroxidase | 62 | 301 | IPR002016 | GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro) | |
| Cmu02g0179 | 867 | MobiDBLite | consensus disorder prediction | 852 | 867 | - | - | |
| Cmu02g0179 | 867 | FunFam | Peroxidase | 178 | 320 | - | - | |
| Cmu02g0179 | 867 | CDD | secretory_peroxidase | 41 | 339 | IPR033905 | GO:0004601(InterPro)|GO:0042744(InterPro) | |
| Cmu02g0179 | 867 | FunFam | Peroxidase | 45 | 188 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cmu02g0179 | Cmu-Chr2:1703988 | Cmu02g0181 | Cmu-Chr2:1726103 | 7.40E-88 | dispersed | |
| Cmu02g0179 | Cmu-Chr2:1703988 | Cmu02g0180 | Cmu-Chr2:1718272 | 6.50E-100 | tandem | |
| Cmu02g0179 | Cmu-Chr2:1703988 | Cmu02g0861 | Cmu-Chr2:10451928 | 4.90E-124 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cmu02g0179 | K00430 | - | csv:101222960 | 679.863 |