Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0179 ATGATTTTCCTTTATGTGCAACGGGACCTGGTTCAGTACGCCTATTCCACACCATTCGAGGACCTCTTTTCCTCTTATGATGATGTAGACTCATTAGGACTTGCTAGCTCAAGCCAAGCTCAGCTAGAGCTTGACTACTATGGAAAGAGCTGCCCTCGTGCTGAGAAAATCGTCTATGATTACGTTTACAAGAACATTCCCAAGGTTCCTACCTTGGCTTCTGCCTTACTTAGAATGCATTTCCACGACTGCTTCGTTCGGGGTTGTGATGCATCTGTACTTTTGAACTCAACTACGAACAACCAAAGTGAGAAAGTATCTCCACCAAATCTAACACTGAGAGGCTTCGACTTCATTGATAAAATTAAGAAACTTTTGGAAGCTGAATGCCCTGGAGTCGTCTCCTGCGCCGACATTATTTCTTTAGTTGCAAGAGACTCCGTCGTTGCTATCGGCGGTCCATTCTGGAGGGTTCCGACCGGAAGGAGAGATGGTTTGATCTCAAGATCCACAGAAGCTTTGGTGAACATTCCTCCACCGTTTGCCAATTTGTCAACTCTACAACAACAATTCGCTAACAAGGGTCTTGATCTCAAAGACTTGGTTTTGCTTTCAGGAGCGCACACAATTGGGGTATCTCACTGCTCGTCCTTTACGCGGCGGCTCTACAACTTCACCGGCGTGGGAGATCAAGACCCATCACTTGACAGTCAGTACGCCGCAAATCTCAAGGCAAACAAATGCAAAAGCATTAGCGCCAACGGCATTGTGGAAATGGACCCTGGCAGTTTCAAAACCTTCGATCTCAGCTACTACTCCCTTCTTCTGAAGCGCCGAGGGCTGTTCCAGTCCGACGCGGCTCTGACCACCAGCGCAGCCACCAAGGCCTTCGTCACCGACCTGCTCAATGGCTCCGTTCAGAACTTTTTCGCCCAGTTTGGGTTAGCCATGGAGAAGATGGGTCGCATAGGGGTCAAGACTGGGTCCGAGGGTGAGATTCGCAACCACTGCGCTTTTCCCGCCATTGCTTTGCAACGAAGGAAAAATCTAAAGCTGCAAAAAAGAGGAGAAATAAAAACCCCTCATCTCGGTGTTCGTCCAAGCGGTCGGCGTTTTCCTTCAGATAGCTCAGAAAGTTCAGCTCTCGCAATTGACAAGCCATCGAATCTGTTCTATTCTATTATTTTTGCATATTTTCCGATTTTTGGCAATCTTTGTAAGCGAATTTCATCGTCTGAACTACTCCAATTCGGTTCTACATCTATTCTTTCTGATTCGTCGTTGCAAGTACAAACGGCGATTACTGCGACTTCCAATACATACTTCTTCTCTGTTATTGTTCATAAAGGCCACTGTTCTCGCCCAAGTTGCTCCTTTGCTCACGGGAACGCTGAACTCAGACGATTTGCTGGTGGTTCTACCGGTAGACAGGAATATAGAGGAAATGATTTAAGGCATAAGCTTGACAGCAGACATTCTCCCCTGCAGGAAAGGGATTCTAGAGGGCGACATGGACCTCGTGTTGCAGAGTATAGCTCATCTTGGTCACTTGAACGACATAGTGACCGTAAGAGGAGGAAAAAGGAACTTGGGGATCCCCGTCGTGATTATTCTGGAAATTTGAGGATTTCAGATAGAAATGAAGAAGAAGATAGAGAAGGGAAAACCTTGTTTACTTCTAGAGACACTCTTGAGGGGCAGTTAAACAAGATGCAGACAGATATTGAGATGGCTGAGCACCACAAACACCAAGCTGAGGTCTACCTAGACGAGAAAATTCAAGAAGTGGATAGTTTGACTTCTAGAATTCAGGAGCTAGAATCTCAATTACATAAAGAGAGGCAGGAGTGTAGAAGGATCAAATCAAAAATCAAGAAGTTTGTCAAAGCACATAATCGTTACTCAAGGTTGCAAGATGAACTGAAACGATCGCAAGTCCGACTTCAACAGTTGGGAGATCAGCTGGGGCCAGATGTTAATAAAATTGGTGCCAATGAAGAAGACTCAAGTATCAATATTGTGAGCGATGGAGAGGACCCTGGTTATCATACGTCAGGCCCTTTTCATGACCTGCAAAAAGACACTTCTGTAAGCAAGAGGAAGATGCATGCTGTTCAAGATACTGCAGAGAACTCAAATCGAGCTGATTTAAACAAAGGAAATAAAGAGGCAGTGGTGAGAAGGATCTCTCGGTGGAATGCCCATCCTGCTAAATCAGTATATAGCAAAATTGAAGCGGTCGGCAGTGAAATCAGTGATCTGATACCTGCAGCAAATGAAAGCAGGCAGAAGAGGGGAAGGACATCTAGTAGTGTTTCTACTGCGGACAAGGTTAGGGGTCTAGAGTCAGGTGTTGTAGTGCCATTAACCAGCATGGCTGCCCATGCAGTTGATGAGGAAGTTGATATTGACTTGGAAATCAACAATGAAGTGAAAGAACCGAGGGAAAGTACTAAGGAGGCTGCGTCAGGCGGCCTGCCTTTCTTTCCCCCTCCACCACCTCCTCCAATCCGTGAATTCAACCATTCAAGGTATGAGGGTGAAGATCAAAATGTAGATGTGGAGGTGGTTGATGATGAAAGGGAAGGTATGGACGATGCTTAA 2604 45.81 MIFLYVQRDLVQYAYSTPFEDLFSSYDDVDSLGLASSSQAQLELDYYGKSCPRAEKIVYDYVYKNIPKVPTLASALLRMHFHDCFVRGCDASVLLNSTTNNQSEKVSPPNLTLRGFDFIDKIKKLLEAECPGVVSCADIISLVARDSVVAIGGPFWRVPTGRRDGLISRSTEALVNIPPPFANLSTLQQQFANKGLDLKDLVLLSGAHTIGVSHCSSFTRRLYNFTGVGDQDPSLDSQYAANLKANKCKSISANGIVEMDPGSFKTFDLSYYSLLLKRRGLFQSDAALTTSAATKAFVTDLLNGSVQNFFAQFGLAMEKMGRIGVKTGSEGEIRNHCAFPAIALQRRKNLKLQKRGEIKTPHLGVRPSGRRFPSDSSESSALAIDKPSNLFYSIIFAYFPIFGNLCKRISSSELLQFGSTSILSDSSLQVQTAITATSNTYFFSVIVHKGHCSRPSCSFAHGNAELRRFAGGSTGRQEYRGNDLRHKLDSRHSPLQERDSRGRHGPRVAEYSSSWSLERHSDRKRRKKELGDPRRDYSGNLRISDRNEEEDREGKTLFTSRDTLEGQLNKMQTDIEMAEHHKHQAEVYLDEKIQEVDSLTSRIQELESQLHKERQECRRIKSKIKKFVKAHNRYSRLQDELKRSQVRLQQLGDQLGPDVNKIGANEEDSSINIVSDGEDPGYHTSGPFHDLQKDTSVSKRKMHAVQDTAENSNRADLNKGNKEAVVRRISRWNAHPAKSVYSKIEAVGSEISDLIPAANESRQKRGRTSSSVSTADKVRGLESGVVVPLTSMAAHAVDEEVDIDLEINNEVKEPRESTKEAASGGLPFFPPPPPPPIREFNHSRYEGEDQNVDVEVVDDEREGMDDA 867
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 1703988 1715868 - CmPI595203_02g001790.1 Cmu02g0179 408228
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0179 867 Gene3D - 46 338 - -
Cmu02g0179 867 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 447 865 IPR045868 GO:0046872(InterPro)
Cmu02g0179 867 Coils Coil 561 581 - -
Cmu02g0179 867 ProSitePatterns Peroxidases proximal heme-ligand signature. 200 210 IPR019793 -
Cmu02g0179 867 ProSitePatterns Peroxidases active site signature. 73 84 IPR019794 GO:0004601(InterPro)
Cmu02g0179 867 MobiDBLite consensus disorder prediction 516 555 - -
Cmu02g0179 867 MobiDBLite consensus disorder prediction 472 555 - -
Cmu02g0179 867 SUPERFAMILY Heme-dependent peroxidases 41 339 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 Coils Coil 589 623 - -
Cmu02g0179 867 ProSiteProfiles Plant heme peroxidase family profile. 41 341 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 Coils Coil 634 654 - -
Cmu02g0179 867 Gene3D Peroxidase, domain 2 178 320 - -
Cmu02g0179 867 MobiDBLite consensus disorder prediction 479 506 - -
Cmu02g0179 867 MobiDBLite consensus disorder prediction 808 867 - -
Cmu02g0179 867 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Haem peroxidase superfamily signature 260 275 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Haem peroxidase superfamily signature 200 215 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Haem peroxidase superfamily signature 73 87 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Plant peroxidase signature 75 95 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Plant peroxidase signature 315 328 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Plant peroxidase signature 51 70 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Plant peroxidase signature 274 291 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Plant peroxidase signature 258 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 PRINTS Plant peroxidase signature 199 211 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 Pfam Peroxidase 62 301 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0179 867 MobiDBLite consensus disorder prediction 852 867 - -
Cmu02g0179 867 FunFam Peroxidase 178 320 - -
Cmu02g0179 867 CDD secretory_peroxidase 41 339 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g0179 867 FunFam Peroxidase 45 188 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0179 Cmu-Chr2:1703988 Cmu02g0181 Cmu-Chr2:1726103 7.40E-88 dispersed
Cmu02g0179 Cmu-Chr2:1703988 Cmu02g0180 Cmu-Chr2:1718272 6.50E-100 tandem
Cmu02g0179 Cmu-Chr2:1703988 Cmu02g0861 Cmu-Chr2:10451928 4.90E-124 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0179 K00430 - csv:101222960 679.863