Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0181 ATGGCCATTGGTCCAAAGTTTTTCTTCCTTTTCTTTATGAAGTTAATACTTGTATCATCTCTTTCAAATATTGTGGAAGCGCAAAATTTGACAGTCAGATTTTACCAGGATAGCTGTCCTGGAGTGGAGTATACTGTTGCCAAAACGGGTTGTGATGGTTCTGTGCTGCTAAATTCTACAACAAACAACCAAGCTGAGAAAGATGCATTTCCCAACCTTAGTTTAAGAGGTTTCAATGTCATTGACGCTGTTAAAGTTGCCGTCGAAAAGCAATGTCCCGGTGTCGTTTCTTGTGCTGATATCCTCGCTTTAATAGCTCGTGACGCAGTTAGAATGATTGGAGGGCCGCTGTGGGAAGTTCCAACAGGAAGAAGAGACGGAAGAGTATCGATCTCCAGAGAAGCGTTGATCAATTTGCCGCCTCCCTTCGCTAATATCTCTTCTCTCAAAACAAGTTTCCTCTCCAAAGGTCTTTCCGTCAAAGATCTGGTCGTTTTATCCGGATCACACACAATCGGAGTCTCTCACTGCACCTCCTTCTCCAACCGCCTCTACAATTTCACCGGCAAAGGCGACGCCGATCCTAAACTAGACAAATACTACGCCATCGCACTCAAGAACAAATGCAAGCCAAATGACCAGAAAACCATCGTCGAGATGGATCCTGGAAGCTTCAAGACCTTTGATCAAGGTTACTACACTCTTGTCTCCAAGAGAAGAGGATTGTTCCAGTCTGATTCCGCGCTTCTCGACGATCCTGATACCAAAGCCTACATTCTGCTTCAGGCCAGTACACGTGGAGCTACTTTCGCGGCTGATTTCGCCGAATCCATGGTGAATATGGGGAATATCGGCGTCCTCACCGGCACTGACGGCGAAATTAGGCGGCGATGTGCTTTTATTAACTGA 909 45.87 MAIGPKFFFLFFMKLILVSSLSNIVEAQNLTVRFYQDSCPGVEYTVAKTGCDGSVLLNSTTNNQAEKDAFPNLSLRGFNVIDAVKVAVEKQCPGVVSCADILALIARDAVRMIGGPLWEVPTGRRDGRVSISREALINLPPPFANISSLKTSFLSKGLSVKDLVVLSGSHTIGVSHCTSFSNRLYNFTGKGDADPKLDKYYAIALKNKCKPNDQKTIVEMDPGSFKTFDQGYYTLVSKRRGLFQSDSALLDDPDTKAYILLQASTRGATFAADFAESMVNMGNIGVLTGTDGEIRRRCAFIN 302
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1726103 1728572 - CmPI595203_02g001810.1 Cmu02g0181 408230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0181 302 PRINTS Haem peroxidase superfamily signature 96 113 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Haem peroxidase superfamily signature 114 126 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Haem peroxidase superfamily signature 162 177 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Haem peroxidase superfamily signature 221 236 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PANTHER PEROXIDASE 25-RELATED 49 298 IPR000823 GO:0004601(InterPro)|GO:0004601(PANTHER)|GO:0006950(PANTHER)|GO:0006979(InterPro)|GO:0009505(PANTHER)|GO:0009506(PANTHER)|GO:0020037(InterPro)
Cmu02g0181 302 CDD secretory_peroxidase 29 301 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cmu02g0181 302 Gene3D Peroxidase, domain 2 140 281 - -
Cmu02g0181 302 Pfam Peroxidase 35 260 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 Gene3D - 49 302 - -
Cmu02g0181 302 ProSiteProfiles Plant heme peroxidase family profile. 50 302 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 SUPERFAMILY Heme-dependent peroxidases 29 302 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Plant peroxidase signature 161 173 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Plant peroxidase signature 114 129 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Plant peroxidase signature 276 289 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Plant peroxidase signature 235 252 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Plant peroxidase signature 219 234 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Plant peroxidase signature 76 89 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 PRINTS Plant peroxidase signature 95 105 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cmu02g0181 302 FunFam Peroxidase 140 281 - -
Cmu02g0181 302 ProSitePatterns Peroxidases proximal heme-ligand signature. 162 172 IPR019793 -
Cmu02g0181 302 FunFam Peroxidase 49 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0179 Cmu-Chr2:1703988 Cmu02g0181 Cmu-Chr2:1726103 7.40E-88 dispersed
Cmu02g0181 Cmu-Chr2:1726103 Cmu02g0861 Cmu-Chr2:10451928 7.80E-85 dispersed
Cmu02g0180 Cmu-Chr2:1718272 Cmu02g0181 Cmu-Chr2:1726103 7.90E-149 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0181 K00430 - csv:101219177 497.664