Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g0184 | ATGAGCCGTCGGATCAACTACGAGATTTTATCTGCACCGTCTGTTCGTCTCCGGATTCACATCTTTTTCTCCCGAGCAAATATCTTATTTGCTGGTTGGTTACCTGTGTTCTACCCCGGACAGCCAAGTTTCATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAATACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTCAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGACCAAGTTATGGATCATTGGACCTTTTTAATTAATGATGATGCATTTCCTGCTTTCTCATCCCGATTGCGACATCTAACACATCATTTTATCGAATATGGTCCTGTATCTGCCCTTTGGTTTTACGCTCTTCGTCTCCGGATTCACACCTTTTTCTCTTGGGTTAGGGTTTCTCTTTTGTGCTTGCTTGTATTGTTTTTTCTGTTTCTGGGATCGAACCGCAAGATCCGTTTATTTTCTGGGATTTTTGAGGAGCTGAATTTAAGAGCCCATAATTTATTTGCTGGTTACCTGTGTTCTACTCCGGACAGCCAAGTTTCATACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTCCAAGGACTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAGAGAAAGAATGTATCTACCTTCCTTGTGCAGAGCATTGTTCAACCTTTCGCCCTGCTTTCTCGTCATCGAATTGTATTCTTAGCATTTTTATTCATTCATGAGACTGCTGCATTCGGGCACTATTCCCCAACTCCTGATTGA | 1158 | 43.44 | MSRRINYEILSAPSVRLRIHIFFSRANILFAGWLPVFYPGQPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDHWTFLINDDAFPAFSSRLRHLTHHFIEYGPVSALWFYALRLRIHTFFSWVRVSLLCLLVLFFLFLGSNRKIRLFSGIFEELNLRAHNLFAGYLCSTPDSQVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQSIVQPFALLSRHRIVFLAFLFIHETAAFGHYSPTPD | 385 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1739788 | 1746414 | + | CmPI595203_02g001840.1 | Cmu02g0184 | 408233 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g0184 | 385 | FunFam | Eukaryotic translation initiation factor SUI1 | 255 | 361 | - | - | |
Cmu02g0184 | 385 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 281 | 351 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu02g0184 | 385 | Pfam | Translation initiation factor SUI1 | 72 | 146 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu02g0184 | 385 | Pfam | Translation initiation factor SUI1 | 278 | 349 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu02g0184 | 385 | NCBIfam | translation initiation factor SUI1 | 50 | 155 | IPR005874 | GO:0003743(InterPro) | |
Cmu02g0184 | 385 | NCBIfam | translation initiation factor SUI1 | 261 | 350 | IPR005874 | GO:0003743(InterPro) | |
Cmu02g0184 | 385 | CDD | eIF1_SUI1 | 279 | 349 | IPR005874 | GO:0003743(InterPro) | |
Cmu02g0184 | 385 | SUPERFAMILY | eIF1-like | 273 | 350 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu02g0184 | 385 | FunFam | Eukaryotic translation initiation factor SUI1 | 46 | 157 | - | - | |
Cmu02g0184 | 385 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 | 45 | 155 | - | GO:0003723(PANTHER) | |
Cmu02g0184 | 385 | SUPERFAMILY | eIF1-like | 42 | 156 | IPR036877 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu02g0184 | 385 | Gene3D | - | 41 | 156 | - | - | |
Cmu02g0184 | 385 | Gene3D | - | 253 | 357 | - | - | |
Cmu02g0184 | 385 | ProSiteProfiles | Translation initiation factor SUI1 family profile. | 75 | 145 | IPR001950 | GO:0003743(InterPro)|GO:0006413(InterPro) | |
Cmu02g0184 | 385 | CDD | eIF1_SUI1 | 73 | 155 | IPR005874 | GO:0003743(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g0184 | Cmu-Chr2:1739788 | Cmu09g1034 | Cmu-Chr9:10416046 | 2.10E-42 | dispersed | |
Cmu10g1344 | Cmu-Chr10:6395471 | Cmu02g0184 | Cmu-Chr2:1739788 | 5.30E-45 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g0184 | K03113 | - | csv:101219651 | 223.787 |