Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0184 ATGAGCCGTCGGATCAACTACGAGATTTTATCTGCACCGTCTGTTCGTCTCCGGATTCACATCTTTTTCTCCCGAGCAAATATCTTATTTGCTGGTTGGTTACCTGTGTTCTACCCCGGACAGCCAAGTTTCATGTCTGAATTCAACGTGCAGATTCCATCTGCTTTTGACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCTGGGGCAAAAGAATACGTTCATGTGCGCATACAGCAACGTAACGGGAGAAAAAGCCTGACAACTGTCCAAGGATTGAAGAAGGAGTTCAGTTATAACAAGATACTCAAGGATCTGAAGAAGGAATTCTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAAAGAAAGAATGTGTCTACCTTCCTTGTGCAGGCTGGCATTGTGAAGAAGGAGAACATCAAGATTCACGACCAAGTTATGGATCATTGGACCTTTTTAATTAATGATGATGCATTTCCTGCTTTCTCATCCCGATTGCGACATCTAACACATCATTTTATCGAATATGGTCCTGTATCTGCCCTTTGGTTTTACGCTCTTCGTCTCCGGATTCACACCTTTTTCTCTTGGGTTAGGGTTTCTCTTTTGTGCTTGCTTGTATTGTTTTTTCTGTTTCTGGGATCGAACCGCAAGATCCGTTTATTTTCTGGGATTTTTGAGGAGCTGAATTTAAGAGCCCATAATTTATTTGCTGGTTACCTGTGTTCTACTCCGGACAGCCAAGTTTCATACCCATTTGCTGATGCAAATGCTGAGGACTCAGGAGCCGGAGCAAAAGAGTATGTTCATGTGCGTATACAGCAACGCAACGGGAGAAAAAGTCTGACAACTGTCCAAGGACTGAAGAAGGAATTTAGTTATAACAAGATTCTTAAGGACCTGAAGAAGGAATTTTGCTGTAATGGCACAGTTGTGCAAGATCCTGAGCTAGGCCAGGTTATACAACTTCAGGGAGACCAGAGAAAGAATGTATCTACCTTCCTTGTGCAGAGCATTGTTCAACCTTTCGCCCTGCTTTCTCGTCATCGAATTGTATTCTTAGCATTTTTATTCATTCATGAGACTGCTGCATTCGGGCACTATTCCCCAACTCCTGATTGA 1158 43.44 MSRRINYEILSAPSVRLRIHIFFSRANILFAGWLPVFYPGQPSFMSEFNVQIPSAFDPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQAGIVKKENIKIHDQVMDHWTFLINDDAFPAFSSRLRHLTHHFIEYGPVSALWFYALRLRIHTFFSWVRVSLLCLLVLFFLFLGSNRKIRLFSGIFEELNLRAHNLFAGYLCSTPDSQVSYPFADANAEDSGAGAKEYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQSIVQPFALLSRHRIVFLAFLFIHETAAFGHYSPTPD 385
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 1739788 1746414 + CmPI595203_02g001840.1 Cmu02g0184 408233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0184 385 FunFam Eukaryotic translation initiation factor SUI1 255 361 - -
Cmu02g0184 385 ProSiteProfiles Translation initiation factor SUI1 family profile. 281 351 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu02g0184 385 Pfam Translation initiation factor SUI1 72 146 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu02g0184 385 Pfam Translation initiation factor SUI1 278 349 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu02g0184 385 NCBIfam translation initiation factor SUI1 50 155 IPR005874 GO:0003743(InterPro)
Cmu02g0184 385 NCBIfam translation initiation factor SUI1 261 350 IPR005874 GO:0003743(InterPro)
Cmu02g0184 385 CDD eIF1_SUI1 279 349 IPR005874 GO:0003743(InterPro)
Cmu02g0184 385 SUPERFAMILY eIF1-like 273 350 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu02g0184 385 FunFam Eukaryotic translation initiation factor SUI1 46 157 - -
Cmu02g0184 385 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 45 155 - GO:0003723(PANTHER)
Cmu02g0184 385 SUPERFAMILY eIF1-like 42 156 IPR036877 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu02g0184 385 Gene3D - 41 156 - -
Cmu02g0184 385 Gene3D - 253 357 - -
Cmu02g0184 385 ProSiteProfiles Translation initiation factor SUI1 family profile. 75 145 IPR001950 GO:0003743(InterPro)|GO:0006413(InterPro)
Cmu02g0184 385 CDD eIF1_SUI1 73 155 IPR005874 GO:0003743(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0184 Cmu-Chr2:1739788 Cmu09g1034 Cmu-Chr9:10416046 2.10E-42 dispersed
Cmu10g1344 Cmu-Chr10:6395471 Cmu02g0184 Cmu-Chr2:1739788 5.30E-45 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0184 K03113 - csv:101219651 223.787