Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g0204 | ATGGCCTGGACCCGACGATCCGCCGTCGGAAACGGCTCATCCGCCACCGTCTACCTCGCCTCCATCGCCTCCTCCGGCGAGCTATTCGCCGTCAAGTCCGCCGAGCTTCTCAAATCAGACTTCTTGAAAACAGAGCAGAGGATTCTTTCTTCCCTTTCCCACCCTTCAATTGTGGGCTACAGGGGATTCGATGTAACGACAGAAAATGGGAAGCTAATGTACAATCTCTTCATGGAGTACGTCGCCGGTGGCACTCTTACCGAAGAAATTGTCCGACGCGGCGGCAGGATTAAGGAGGCGGCGGCGGCGTTTTACACGCGTCAAATTGTTAGAGGTTTGGAGTACTTGCACAAACAGGGCTTGGTGCATTGTGATATCAAAGCTAAGAACATTTTAATCGGTGGAGATGGTTTGAAGATTGCTGATTTCGGTTGCTCCAAATGGGTTTCTGAGACGGAGGCGGTAATCAGCGGAACGCCGATGTTCATGGCACCGGAAGTGGCGCGTGGGGAAAAACAGGGGATTTCCTCTGATATATGGGCACTTGGGTGTACTTTAATCGAAATGGTCACCGGCGCTCCACCATGGCCCATCTCCGGCGACCCTGTTTCGGTGCTGTACCGGATCGGATATTCCGGCGAATCGCCGGCAATTCCGAGTTTTCTATCGGAGAAAGCGAAGGATTTTTTAAGGAAATGCTTGAGAAGGGACCCAACAGAAAGATGGAGCGCGAATCAACTTCTTGAACATCCATTTTTTGTGGAATTGAGTTCTGGGTCGGAGGAAATCAAGGAATTACATCCACATTCCGAATCTCCGACGAGTATTTTGGATCAAAGCCTCTGGAGTTTGTTAGAAGAAGAATCAGAAACTCTGTTGAAAACAGAGCAATGGGATGACGACGACGACGACGACAGAATCAAAGGGCTGGCGATGTTTTCAGGAGAAATTAAATGGGAATTGGGAGATGAGAATTGGATCACAATCAGAAGCTGTGTAGATAGTGAAGATGAAGAAGAATCCAGTTTTAGAAGAAATGATTTAGACTTAGTGGAACAGGAAAGAATAGGTAGTGGGAAAATCCAGTGTTTGGAATTGTTAGATAAAACAGTTAGCTTTAGAGTAAGGAAAAGTAATATTCTAATTAGTGAAATTAGTACCAACATTGGACAAATCTAA | 1179 | 46.82 | MAWTRRSAVGNGSSATVYLASIASSGELFAVKSAELLKSDFLKTEQRILSSLSHPSIVGYRGFDVTTENGKLMYNLFMEYVAGGTLTEEIVRRGGRIKEAAAAFYTRQIVRGLEYLHKQGLVHCDIKAKNILIGGDGLKIADFGCSKWVSETEAVISGTPMFMAPEVARGEKQGISSDIWALGCTLIEMVTGAPPWPISGDPVSVLYRIGYSGESPAIPSFLSEKAKDFLRKCLRRDPTERWSANQLLEHPFFVELSSGSEEIKELHPHSESPTSILDQSLWSLLEEESETLLKTEQWDDDDDDDRIKGLAMFSGEIKWELGDENWITIRSCVDSEDEEESSFRRNDLDLVEQERIGSGKIQCLELLDKTVSFRVRKSNILISEISTNIGQI | 392 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 1987388 | 1988566 | - | CmPI595203_02g002040.1 | Cmu02g0204 | 408253 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g0204 | 392 | Gene3D | Transferase(Phosphotransferase) domain 1 | 2 | 312 | - | - | |
Cmu02g0204 | 392 | Pfam | Protein kinase domain | 5 | 253 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu02g0204 | 392 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 121 | 133 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cmu02g0204 | 392 | ProSitePatterns | Protein kinases ATP-binding region signature. | 9 | 32 | IPR017441 | GO:0005524(InterPro) | |
Cmu02g0204 | 392 | SUPERFAMILY | Protein kinase-like (PK-like) | 6 | 292 | IPR011009 | - | |
Cmu02g0204 | 392 | CDD | STKc_MAPKKK | 3 | 253 | - | - | |
Cmu02g0204 | 392 | SMART | serkin_6 | 3 | 253 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cmu02g0204 | 392 | PANTHER | CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED | 2 | 253 | IPR052751 | GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER) | |
Cmu02g0204 | 392 | ProSiteProfiles | Protein kinase domain profile. | 3 | 253 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu02g0204 | Cmu-Chr2:1987388 | Cmu02g1236 | Cmu-Chr2:25328246 | 2.30E-49 | dispersed | |
Cmu03g0686 | Cmu-Chr3:1034221 | Cmu02g0204 | Cmu-Chr2:1987388 | 8.40E-57 | transposed | |
Cmu08g0526 | Cmu-Chr8:17127559 | Cmu02g0204 | Cmu-Chr2:1987388 | 2.20E-10 | transposed | |
Cmu09g1042 | Cmu-Chr9:10509640 | Cmu02g0204 | Cmu-Chr2:1987388 | 3.80E-86 | transposed | |
Cmu01g2125 | Cmu-Chr1:34017387 | Cmu02g0204 | Cmu-Chr2:1987388 | 3.00E-88 | wgd | |
Cmu02g0204 | Cmu-Chr2:1987388 | Cmu02g0901 | Cmu-Chr2:11662217 | 2.50E-99 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
75277 | PF00069 | Pkinase | 1.30E-58 | CL0016 | Cmu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g0204 | K20716 | - | csv:101205351 | 607.831 |