Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0310 ATGAAACAAATTCTTCTTCATCATCTTCTTCTTCTTCTTCTCCTTCCCTTCATACTTCTCACTCCCACGTCCGCCATTAAAAGGTCCTATGTTGTCTACATGGGAGCTCATTCCCATGGCGGTCGAAAACCGGCCAATATCATCACCGATTCTCACCACGAATTCCTCCGACCGTTTCTCGAAAGTGAAGAGGAGTTTACCGGAGATGCCATCTTTTACTCGTATACAAGACACATCAATGGCTTTGCAGCAATGTTGGAAGATGAAGTTGCTGCTCAATTAGCTAAGCACCCGAAAGTGGTGTCGATTTTTTTGAATAGAGGAAGAAAGTTACATACAACAAGATCATGGGAGTTCATGGGAATGGAGAACAACAATGGACTTATCACTTCAGAATCAATATGGAAGAAGGCAAGATTTGGAGAAGACACCATTATTGGAAACCTTGATACTGGGGTGTGGCCAGAATCAAAGAGCTTTAGTGATTATGATGATTTGGGACCTATTCCTCTTAAGTGGAGAGGAATCTGCCAAAACCAAAATGATCCTTCTTTCCATTGCAATAGGAAACTAATCGGAGCAAGATACTTCAACAAAGGCTATGAATCCGTCGTCGGACCTCTCAATTCTTCGTTCAATTCGCCGAGGGACAAAGAAGGGCATGGTTCTCATACCTTGTCCACGGCGGGCGGTAACTTCGTCGCCGGAGCTAGCGTTTTCGGCTTGGGGAATGGCACCGCCAAGGGCGGATCACCTAGGGCTCGCGTGGCCGCTTACAAGGTCTGCTGGCCTCCAGCGGCCGGAAATGAGTGCTTCGATGCCGATATATTGGCGGCGTTTGATTTGGCGATCCACGACGGCGTCGACGTGTTGTCGGTGTCGCTTGGAGGAGATCCAAATCCGTTGTTTAACGATAGTGTAGCCATTGGCTCATTCCACGCCGTGAAGCATGGGATTGTTGTGATTTGCTCTGCCGGAAATTCGGGACCGGCAGCCGGTTCGGTAACCAATATTGCGCCCTGGCAAATCACCGTCGGAGCCAGCACCATGGACAGGAAGTTCCCTAGTCTTGTCGTTCTTGGGAACAAGAAGCAGATTGAGGGTGAAAGCCTGTCTCAAGAAGCTTTGCCAAGCAGGAAGTTATATCCACTCATGAGTGCCGCGGATGTTAGATTAGCCAATGCATCAGCTCATGAAGCTCAATTGTGTAAAGCTGGTACGCTTGATCCTATGAAGGCTAAGGGAAAGATTCTCGTCTGCCTTCGAGGCGATAATGCAAGAGTTGACAAGGGCGAGCAAGCACTATTGGCTGGTGCCATGGGCATGATTCTCGCCAATAATGAGCCTAGTGGGAATGAAATCCTTGCTGACCCACACGTCCTTCCAGCCTCGCACATAAACTTCACTGATGGCACTTCGGTCTTTGCATACATCAATTCAACCAAGTTTCCTGAGGCTTATATCACACGAGCTACAACTCAATTAGGTATAAGGCCAGCTCCATTTATGGCAGCATTTTCATCAGTGGGGCCAAACACTATTACTCCAGAGATCCTAAAGCCTGATATTACAGCTCCTGGGCTGAGTGTTATAGCTGCTTATACTGAAGCAGAAGGCCCTACAAATCAAGAATATGATAATCGTCGGGTTCCTTTTAACTCAGTATCAGGAACTTCTATGTCATGCCCTCATGTTTCTGGTATTGCTGGTCTTCTCAGGACTCTTTACCCTCATTGGAGTCCTGCAGCTATAAAATCTGCCATCATGACCACAGCAAACACTTTGGACAACAACTTCGAGCCGCTCCTCAATGCGTCCTACTCTGTGGCCACACCATTCAACTATGGAGCAGGACACATTAATCCAAATGGTGCTACGGATCCTGGCTTGGTCTATGACATAGAGGTTAATGAGTATCTGTTATTTCTATGTGCATTAGGATATAACCAAGCTCAAATATCACAATTCTCCAATGGTCCTTTCAATTGTTCGGAGCCTATTAGTCTTACAAATCTCAACTACCCTTCAATTACTGTCCCTAAGCTCTCTAGATCGATCACAATTACTCGAAGACTTAAGAACGTTGGTTCTCCCGGAACGTACAAAGCTGAGATAAGAAAACCGGCTGGGATATCGGTTTGGGTTAAGCCAAAGACATTGGACTTCACAAGATTAGGTGAAGAGCAGAGCTTCAAAGTTTTTATGAAAGTTAAGGAACAGAATGTAGGACGGAAGAACTATGTATACGGTGATTTGATATGGTCAGATGGTAAGCACCATGTAAGAAGCCCTATTGTGGTAAAGGTAGTTTAG 2313 46.04 MKQILLHHLLLLLLLPFILLTPTSAIKRSYVVYMGAHSHGGRKPANIITDSHHEFLRPFLESEEEFTGDAIFYSYTRHINGFAAMLEDEVAAQLAKHPKVVSIFLNRGRKLHTTRSWEFMGMENNNGLITSESIWKKARFGEDTIIGNLDTGVWPESKSFSDYDDLGPIPLKWRGICQNQNDPSFHCNRKLIGARYFNKGYESVVGPLNSSFNSPRDKEGHGSHTLSTAGGNFVAGASVFGLGNGTAKGGSPRARVAAYKVCWPPAAGNECFDADILAAFDLAIHDGVDVLSVSLGGDPNPLFNDSVAIGSFHAVKHGIVVICSAGNSGPAAGSVTNIAPWQITVGASTMDRKFPSLVVLGNKKQIEGESLSQEALPSRKLYPLMSAADVRLANASAHEAQLCKAGTLDPMKAKGKILVCLRGDNARVDKGEQALLAGAMGMILANNEPSGNEILADPHVLPASHINFTDGTSVFAYINSTKFPEAYITRATTQLGIRPAPFMAAFSSVGPNTITPEILKPDITAPGLSVIAAYTEAEGPTNQEYDNRRVPFNSVSGTSMSCPHVSGIAGLLRTLYPHWSPAAIKSAIMTTANTLDNNFEPLLNASYSVATPFNYGAGHINPNGATDPGLVYDIEVNEYLLFLCALGYNQAQISQFSNGPFNCSEPISLTNLNYPSITVPKLSRSITITRRLKNVGSPGTYKAEIRKPAGISVWVKPKTLDFTRLGEEQSFKVFMKVKEQNVGRKNYVYGDLIWSDGKHHVRSPIVVKVV 770
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2817119 2826971 + CmPI595203_02g003100.1 Cmu02g0310 408359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0310 770 Pfam Subtilase family 141 595 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cmu02g0310 770 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 112 IPR037045 -
Cmu02g0310 770 FunFam Subtilisin-like protease SBT1.5 143 363 - -
Cmu02g0310 770 Gene3D - 351 495 - -
Cmu02g0310 770 SUPERFAMILY Subtilisin-like 111 630 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu02g0310 770 FunFam p69E protein-like 643 770 - -
Cmu02g0310 770 SUPERFAMILY PA domain 410 493 IPR046450 -
Cmu02g0310 770 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 30 766 IPR045051 -
Cmu02g0310 770 Pfam Fibronectin type-III domain 671 767 IPR041469 -
Cmu02g0310 770 ProSiteProfiles Serine proteases, subtilase domain profile. 116 626 - -
Cmu02g0310 770 Pfam Peptidase inhibitor I9 29 112 IPR010259 -
Cmu02g0310 770 PRINTS Subtilisin serine protease family (S8) signature 556 572 IPR015500 -
Cmu02g0310 770 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Cmu02g0310 770 PRINTS Subtilisin serine protease family (S8) signature 141 160 IPR015500 -
Cmu02g0310 770 FunFam Subtilisin-like protease SBT5.3 19 112 - -
Cmu02g0310 770 CDD PA_subtilisin_like 358 488 - -
Cmu02g0310 770 CDD Peptidases_S8_3 110 593 IPR034197 -
Cmu02g0310 770 ProSitePatterns Serine proteases, subtilase family, serine active site. 557 567 IPR023828 -
Cmu02g0310 770 Gene3D Peptidase S8/S53 domain 143 639 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cmu02g0310 770 Pfam PA domain 399 472 IPR003137 -
Cmu02g0310 770 Gene3D - 643 770 - -
Cmu02g0310 770 FunFam subtilisin-like protease SBT1.5 351 495 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1102 Cmu-Chr1:17870245 Cmu02g0310 Cmu-Chr2:2817119 5.70E-31 dispersed
Cmu01g1107 Cmu-Chr1:17921733 Cmu02g0310 Cmu-Chr2:2817119 8.30E-248 dispersed
Cmu02g0310 Cmu-Chr2:2817119 Cmu10g1225 Cmu-Chr10:5062808 1.80E-263 dispersed
Cmu01g2355 Cmu-Chr1:35621593 Cmu02g0310 Cmu-Chr2:2817119 9.70E-172 transposed
Cmu10g1221 Cmu-Chr10:5013084 Cmu02g0310 Cmu-Chr2:2817119 4.80E-248 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0310 - - - 0.0