Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0322 ATGTCCGATTTGAACTCCGCCGTCCACGGCGGCTCCTCTCGTTACGCCGATCAATTTTTCGGTTCAGAGCTCCAACTTCAAAATTTCTCACAAACCCATCTCGCCGATCCCAACAACTCGCCGGAAAGTCACCAGAAAAATCTCAATCCGGCCGATTCTACCACCCCCACTAGCGGCGGTTCGTCCACGCGCCGTTCTCGTGGCCGCCCCGCCGGCTCCAAGAACAAGCCAAAACCGCCGGTGATTGTAACACGTGACAGCCCCAATGCTCTGAGATCGCACGTGCTGGAGGTCTCCGCCGGCTCCGATGTGGTCGAATCCGTCTCGAGTTACGCCACGCGCCGCCGCCACGGCGTTTGCATTCTCGCCGGCACCGGCGCCGTCACAAACGTCAACTTGCGCCAGCCGGCGGCGCCGTCGGGAACTGTTATGACGCTTCATGGAACGTTTGAGATTGTGTCTCTGACTGGTACGGCGTTGCCACCGCCGGCGCCTCCGGGTGCCGGAGGGATAACTGTTTATTTGTCCGGCGGGCAAGGGCAGGTCGTCGGAGGAAGTGTTGTCGGGCCGTTGACGGCGTCAAGTCCCGTTGTATTGATGGTGGCATCGTTTACTAATGCGGTGTATGATCGGCTGCCGCTGGACGAGGCGGAGCCGCCGGTGCAAGCTCAGCCATCGGCATCACCATCTTCAGATATTACAGGTGGAGGCGGGCAGCTTGGGGGCATCGGAAGCTTCAACCTGCCCGACGACAATTACGGTTGGAATGGCAATACATCGAGGCCTCCGACGACGCTGTGA 801 59.93 MSDLNSAVHGGSSRYADQFFGSELQLQNFSQTHLADPNNSPESHQKNLNPADSTTPTSGGSSTRRSRGRPAGSKNKPKPPVIVTRDSPNALRSHVLEVSAGSDVVESVSSYATRRRHGVCILAGTGAVTNVNLRQPAAPSGTVMTLHGTFEIVSLTGTALPPPAPPGAGGITVYLSGGQGQVVGGSVVGPLTASSPVVLMVASFTNAVYDRLPLDEAEPPVQAQPSASPSSDITGGGGQLGGIGSFNLPDDNYGWNGNTSRPPTTL 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 2935985 2938263 - CmPI595203_02g003220.1 Cmu02g0322 408371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0322 266 CDD DUF296 92 158 IPR005175 -
Cmu02g0322 266 MobiDBLite consensus disorder prediction 28 89 - -
Cmu02g0322 266 MobiDBLite consensus disorder prediction 28 68 - -
Cmu02g0322 266 FunFam AT-hook motif nuclear-localized protein 91 220 - -
Cmu02g0322 266 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 43 235 IPR014476 GO:0003680(PANTHER)|GO:0003680(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0010228(PANTHER)
Cmu02g0322 266 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 220 - -
Cmu02g0322 266 Pfam Plants and Prokaryotes Conserved (PCC) domain 92 206 IPR005175 -
Cmu02g0322 266 MobiDBLite consensus disorder prediction 217 266 - -
Cmu02g0322 266 ProSiteProfiles PPC domain profile profile. 88 226 IPR005175 -
Cmu02g0322 266 MobiDBLite consensus disorder prediction 251 266 - -
Cmu02g0322 266 Gene3D - 91 220 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0322 Cmu-Chr2:2935985 Cmu02g1685 Cmu-Chr2:30704604 1.40E-58 dispersed
Cmu02g0322 Cmu-Chr2:2935985 Cmu06g0032 Cmu-Chr6:337616 8.40E-59 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0322 - - - 0.0