Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g0413 | ATGGGTGCGGAACAAAACAATCACGATGCAGAGGAGGGAACGCTGGAGATTGGAATGGAATATAGAACAGTCTCTGGAGTTGCTGGTCCCTTGGTTATTCTGGACAAAGTCAAGGGACCTAAATTTCAGGAGATTGTTAATATTCGTCTAGGAGATGGAACAACCAGGCGTGGTCAAGTCCTGGAAGTTGATGGGGAGAAAGCTGTTGTTCAGGTTTTCGAAGGGACATCTGGAATTGATAACAAATATACAACTGTGCAATTTACCGGAGAGGTTTTGAAAACTCCGGTCTCCTTGGACATGCTTGGGCGAATTTTTAATGGTTCTGGAAAACCCATTGATAATGGCCCTCCTATCTTGCCTGAGGCTTACTTGGATATTTCTGGGAGTTCTATAAACCCTAGTGAAAGAACTTATCCTGAAGAGATGATACAGACTGGAATTTCTACCATTGATGTCATGAATTCCATTGCTAGAGGGCAAAAGATCCCACTTTTCTCAGCTGCAGGTCTTCCTCACAATGAAATTGCTGCCCAGATATGTCGTCAGGCTGGCTTGGTTAAGAGGTTGGAGAAATCCAATGACCTTCTTGAGGGTGGTGAGGAGGACAACTTTGCCATTGTTTTTGCTGCTATGGGTGTTAACATGGAGACTGCTCAATTTTTCAAACGTGATTTTGAAGAAAATGGTTCAATGGAGAGAGTGACCCTATTTCTGAACCTGGCTAATGATCCTACAATTGAGCGTATCATCACTCCTCGCATTGCTCTTACTACTGCTGAATATTTGGCTTATGAATGTGGGAAGCATGTTCTCGTCATACTGACAGATATGAGTTCTTATGCTGATGCCCTACGTGAGGTGTCTGCTGCACGAGAGGAAGTACCTGGAAGGCGTGGATACCCTGGTTATATGTATACGGATCTTGCTACAATCTACGAACGAGCTGGACGTATTGAAGGACGTAAAGGATCCATCACTCAAATCCCAATCCTCACCATGCCAAACGATGATATTACACATCCTACTCCCGATCTTACTGGCTATATTACCGAGGGACAAATCTACATCGACAGGCAACTCTACAACAGACAGATATACCCACCAATTAATGTCCTTCCTTCATTGTCTCGTCTCATGAAGAGTGCCATTGGTGAGGGAATGACCCGCAGGGATCATGCTGATGTATCCAACCAGCTCTATGCAAATTATGCAATTGGGAAGGATGTTCAGGCCATGAAAGCCGTGGTCGGAGAAGAAGCACTCTCTTCTGAGGATCTGCTCTATTTGGAGTTTTTGGACAAATTTGAGAGGAAGTTTGTCAGTCAAGGAGCTTATGATACTCGAAACATTTTCCAATCACTTGACCTGGCATGGACACTGCTTCGTATTTTCCCTCGTGAACTTCTGCACCGTATTCCTGCAAAGACTCTTGATCTGTTTTACAGCCGTGAATCTGCAAATTGA | 1467 | 44.17 | MGAEQNNHDAEEGTLEIGMEYRTVSGVAGPLVILDKVKGPKFQEIVNIRLGDGTTRRGQVLEVDGEKAVVQVFEGTSGIDNKYTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKSNDLLEGGEEDNFAIVFAAMGVNMETAQFFKRDFEENGSMERVTLFLNLANDPTIERIITPRIALTTAEYLAYECGKHVLVILTDMSSYADALREVSAAREEVPGRRGYPGYMYTDLATIYERAGRIEGRKGSITQIPILTMPNDDITHPTPDLTGYITEGQIYIDRQLYNRQIYPPINVLPSLSRLMKSAIGEGMTRRDHADVSNQLYANYAIGKDVQAMKAVVGEEALSSEDLLYLEFLDKFERKFVSQGAYDTRNIFQSLDLAWTLLRIFPRELLHRIPAKTLDLFYSRESAN | 488 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 3751636 | 3756200 | - | CmPI595203_02g004130.1 | Cmu02g0413 | 408462 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g0413 | 488 | Pfam | C-terminal domain of V and A type ATP synthase | 383 | 481 | - | - | |
Cmu02g0413 | 488 | FunFam | V-type proton ATPase subunit B, brain | 29 | 488 | - | - | |
Cmu02g0413 | 488 | Pfam | ATP synthase alpha/beta family, nucleotide-binding domain | 147 | 377 | IPR000194 | GO:0005524(InterPro) | |
Cmu02g0413 | 488 | PIRSF | V-ATPsynth_beta/V-ATPase_B | 11 | 488 | IPR022879 | - | |
Cmu02g0413 | 488 | Hamap | V-type ATP synthase beta chain [atpB]. | 18 | 486 | IPR022879 | - | |
Cmu02g0413 | 488 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 94 | 383 | IPR027417 | - | |
Cmu02g0413 | 488 | PANTHER | V-TYPE PROTON ATPASE SUBUNIT B | 16 | 486 | IPR022879 | GO:0007035(PANTHER)|GO:0046961(PANTHER) | |
Cmu02g0413 | 488 | NCBIfam | V-type ATPase subunit B | 20 | 487 | IPR005723 | GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Cmu02g0413 | 488 | Pfam | ATP synthase alpha/beta family, beta-barrel domain | 24 | 90 | IPR004100 | GO:0046034(InterPro)|GO:1902600(InterPro) | |
Cmu02g0413 | 488 | CDD | ATP-synt_V_A-type_beta_C | 387 | 481 | - | - | |
Cmu02g0413 | 488 | Gene3D | - | 29 | 488 | - | - | |
Cmu02g0413 | 488 | ProSitePatterns | ATP synthase alpha and beta subunits signature. | 368 | 377 | IPR020003 | GO:0005524(InterPro) | |
Cmu02g0413 | 488 | CDD | ATP-synt_V_A-type_beta_N | 20 | 91 | - | - | |
Cmu02g0413 | 488 | CDD | V_A-ATPase_B | 92 | 385 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g0413 | K02147 | - | csv:101211838 | 960.288 |