Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0415 ATGTTATCGGAGTTGATGAACTTTTTGAGGGCCTGTTTCCAGCCGAGCTCCGATCGGTATGTGGCCGGGGAAATCAGGGGGCAGCAGGATGGGCTGTTATGGTACAAAGATAGTGGACAACACTTGAATGGAGAGTTTTCAATGTCTGTGATTCAGGCCAACAATTTGCTTGAAGATCAGAGCCAGATTGAGTCTGGCAGTTTGAGCTTACACGAGTCTGGCCCCAAAGGAACATTTGTTGGTGTGTATGATGGCCATGGAGGCCCTGAGACTTCTCGGTATATCTGTGATCATCTATTCCAGCATCTCAAGAGATTTACTTCTGAGCAAGATCTAATGTCTGCGGATGTAATACGCAAGGCGTTCCAAGCGACAGAAGAGGGGTTTTTTTCAATAGTTCGAAGTCAATGGTCAACAAATCCTCAAATTGCAGCTGTTGGTTCATGCTGTCTAGTTGGTGTAATCTGTGATGGGACTCTCTATGTTGCAAATCTAGGTGATTCTCGTGCTGTTTTGGGTAGAGTAGTGAAGGCAACTGGCGAGGTTCTAGCCATTCAGTTGTCAACAGAACACAATGTTTCTAACGAGTCAGTGAGGCAAGAGCTGCAGTCTTTGCACCCTGATGACTCACAAGTTGTGGTTTTAAGGCATAATGTTTGGCGAGTAAAGGGCATAATACAGATTTCCAGATCCATAGGCGATGTGTACTTGAAAAAAGCTGAGTTCAATAAAGAACCATTGTATGCAAAGTTTCGAGTTCAAAAACCCTTCAAAAAGCCATTTTTGAGCTCTGAACCAGCCATTTCTGAGATCCAGTTGAAGCCAGATGATCAATTTGTTATATTTGCATCAGATGGGTTGTGGGAGCACCTTAGCAATCAGGAAGCAGTCGATATAGTTCATAGCCACTCTCAAAATGGAAGTGCAAGAAGACTGGTCAGAGCTGCTCTTCAAGTAGCTGCAAAGAAAAGAGAAATGAGGTACTCAGATTTGAAGAAGATTGGCCGTGGCGTTCGTCGCCATTTCCACGACGACATCACTGTGGTGGTTGTGTTTCTTGATACCAATATGCTCTTCAGAGCCAGCTCCACGAAGAGCTTGAGTGTCTCACTACGAGGCGGTGGAGTCAACCGGCTTCCTAACTCTTTATCCCCCGTCACTACGCCCGTGTAG 1173 45.44 MLSELMNFLRACFQPSSDRYVAGEIRGQQDGLLWYKDSGQHLNGEFSMSVIQANNLLEDQSQIESGSLSLHESGPKGTFVGVYDGHGGPETSRYICDHLFQHLKRFTSEQDLMSADVIRKAFQATEEGFFSIVRSQWSTNPQIAAVGSCCLVGVICDGTLYVANLGDSRAVLGRVVKATGEVLAIQLSTEHNVSNESVRQELQSLHPDDSQVVVLRHNVWRVKGIIQISRSIGDVYLKKAEFNKEPLYAKFRVQKPFKKPFLSSEPAISEIQLKPDDQFVIFASDGLWEHLSNQEAVDIVHSHSQNGSARRLVRAALQVAAKKREMRYSDLKKIGRGVRRHFHDDITVVVVFLDTNMLFRASSTKSLSVSLRGGGVNRLPNSLSPVTTPV 390
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3768399 3771664 - CmPI595203_02g004150.1 Cmu02g0415 408464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0415 390 FunFam Phosphatase 2C family protein 34 363 - -
Cmu02g0415 390 Gene3D - 25 361 IPR036457 -
Cmu02g0415 390 ProSiteProfiles PPM-type phosphatase domain profile. 42 353 IPR001932 -
Cmu02g0415 390 SMART PP2C_4 37 351 IPR001932 -
Cmu02g0415 390 SUPERFAMILY PP2C-like 49 354 IPR036457 -
Cmu02g0415 390 PANTHER PROTEIN PHOSPHATASE 37 352 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu02g0415 390 CDD PP2Cc 46 353 IPR001932 -
Cmu02g0415 390 ProSitePatterns PPM-type phosphatase domain signature. 79 87 IPR000222 GO:0043169(InterPro)
Cmu02g0415 390 Pfam Protein phosphatase 2C 70 321 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g2001 Cmu-Chr1:33235040 Cmu02g0415 Cmu-Chr2:3768399 1.60E-162 dispersed
Cmu02g0415 Cmu-Chr2:3768399 Cmu10g0895 Cmu-Chr10:994325 1.50E-160 dispersed
Cmu02g0415 Cmu-Chr2:3768399 Cmu02g1208 Cmu-Chr2:24863102 1.40E-158 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0415 - - - 0.0