Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0433 ATGGAGATTCCAAGCAGTTGTTCAATGGATAGTTTCTTTGATGAACTTCTCAAAGACACTCATACTTGTACTCATACACATACTTGCAATCCACCAGGCCCTGACTACTCTCATACCCACACATGTTTTCATGTCCACACTAAAATTGTCCCTGCCCCATCTGAAGAAGACAAGGTTGTTACTGATGACACTGCAGAATCAACTGAGAAGAAGTCGAAGAAACGCCCGTTGGGTAACCGTGAAGCTGTTCGTAAGTACCGCGAGAAAAAGAAAGCTAGGGCAGCCTCATTAGAGGATGAGGTTGTTAGATTGAGGGCATTGAATCAGCATTTGATGAAGAGATTGCAGGGGCAGGCAGCACTCGAGGCTGAGATTGCTAGGCTCAAGTGTTTGCTTGTGGATATTAGGGGCAGAATCGAAGGGGAGATTGGTTCTTTCCCTTACCAAAAAGCTGTTAATCCTAACTTGTCCAACCCAAGCATCCCTGGTGCTTTTGTGATGAACCCATGTAATATGCAGTGTGAGGATCAGGTTTACTGCCTCCATCCCGGGGTCGATGGCAACAGAAGCAGTGAAGGTGCTGTGATAAATGGACAAAGCTTTGGTGCTTGTGAATTTGAAAATCCTCAATGTTTGGCAAATCATGATTCGGGATCAAAAGAACTACCTGGGTGTGGAGTAGGGAATGCAGTTTCAAATGATATTTCTTCAGGCAAGAAGAAAGGAGGAAGTCGTAAAGAGACATGGGCCTGA 753 45.02 MEIPSSCSMDSFFDELLKDTHTCTHTHTCNPPGPDYSHTHTCFHVHTKIVPAPSEEDKVVTDDTAESTEKKSKKRPLGNREAVRKYREKKKARAASLEDEVVRLRALNQHLMKRLQGQAALEAEIARLKCLLVDIRGRIEGEIGSFPYQKAVNPNLSNPSIPGAFVMNPCNMQCEDQVYCLHPGVDGNRSSEGAVINGQSFGACEFENPQCLANHDSGSKELPGCGVGNAVSNDISSGKKKGGSRKETWA 250
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 3953541 3955544 - CmPI595203_02g004330.1 Cmu02g0433 408482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0433 250 SMART brlzneu 67 134 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu02g0433 250 Pfam Basic region leucine zipper 68 124 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu02g0433 250 Gene3D - 57 135 - -
Cmu02g0433 250 Coils Coil 80 114 - -
Cmu02g0433 250 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 69 116 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cmu02g0433 250 PANTHER CCAAT/ENHANCER BINDING PROTEIN 2 172 IPR031106 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0003700(InterPro)|GO:0006351(InterPro)|GO:0006357(PANTHER)
Cmu02g0433 250 MobiDBLite consensus disorder prediction 55 79 - -
Cmu02g0433 250 CDD bZIP 73 126 - -
Cmu02g0433 250 MobiDBLite consensus disorder prediction 231 250 - -
Cmu02g0433 250 SUPERFAMILY Leucine zipper domain 71 117 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0433 Cmu-Chr2:3953541 Cmu02g1195 Cmu-Chr2:24692633 4.80E-80 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
5692 PF07716 bZIP_2 7.60E-14 CL0018 Cmu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0433 K25785 - csv:101208161 469.544