Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0440 ATGAGCATCCACCACCGCCCTCCGCCGTCCTCCTCCGCCCTCAAATGGCTCGGCTTAGTTACCGCCGTCTGGGTCCAATCCATCTCCGGCAACAATTACACCTTCTCCAACTACTCCGCCGCCCTCAAATCCCTCATGAACCTCTCCCAGCTCCAACTCAACAATCTCTCCGTCGCCAAAGACCTCGGAAAGGCCTTTGGCCTCCTCGCCGGCCTCGCCTCCGACCGCTTCTCCACCTCCCTCCTGCTCCTCATCGGCTCCATCGAAGGCCTTATTGGCTACGGCGCTCAATGGCTCGTCGTCAGTCAAAAAATCAAACCACTCCCTTACTGGCAGATGTGTATATTTTTGTGTATGGGAGGGAATAGTACCACTTGGATGAACACCGGCGTGCTTGTTACTTGCCTGAGAAACTTCCGGCGAAACAGAGGCACTGTTTCCGGCATTCTCAAAGGCTACATCGCTCTCAGTACCGCCATTTTCACCGATCTTTGTACCGCTCTTTTCTCCGATAATCCCTCTTCTTTTCTCGCCCTCCTTTCCCTCACCCCCTTCGCCGTTTGTCTCACTGCTGTTCTCTTCCTCCGTGAAATCCCCTGTTCCGCCGATAACGAAACAGAGGACTCGAGATACTTCTGGGTACTCAACGCCGTTTCCGTCGCTGTCGCTGTCATTCTCTTAGCCTTCGATTCGATCCCAAATCCCACCTCGTCCGTATCGAGAATTTTCTCCATGGTGTTGCTGATTTTGCTAGCCTCACCTCTGGTAATCCCACTCCACTCGTTTGTCAAAAACAGGGGTCAGTCCGGTGAAGTTGCAGAGGCGTTGCTGGCGGACGAGAGTGCGGTGGAGGGTGCGGAAGAGGGGAAGCCGGTGATCGGAGAAGATCATACGATTGTTGAGGCGATGAAGACGGTTGAATTTTGGATTCTGTTTGGGTCGTTTCTGTGTGGAGTGGGAACGGGATTGGCAGTGATGAACAATATGGGACAGATTGGATTGGCTCTTGGATACGACGAGGTTTCGATTTTCATATCTCTGATGAGTATTTGGGGGTTTTTTGGCCGGATTTTATCGGGATCGGTGTCGGAGCATTTCATCAAGAAAGCAGGAATGCCAAGGCCACTATGGAACGCAGCTTCTCAAATTCTAATGGCACTTGGCTACATTCTCTTAGCCATTGCCATGCCTGGATCCTTATACATCGGCTCGGTTGTTGTCGGGATTTGCTATGGCGTCCGTCTTGCCATCACCGTCCCAATGGCCTCTGAAGTCTTCGGTCTCAAAAACTATGGCATGATCTACAATGTTCTAATCCTCAACCTCCCACTCGGTTCGTTCCTCTTCTCAGGACTGCTTGCCGGGATCCTCTATGATTGGGAGGCGACAACGACGAAGGAAGGCGGCAATATGTGTGTGGGAGGGCATTGTTATAGGCTTGTGTTTGTTGTAATGGCTTGTTCATGTGTGGTTGGGTTTGCCATGGACTTGTTTTTGGCCTTTAGAACCAAGAGGTTGTATTCCAAAATGAGGGGTCTAAAGGGATAA 1548 51.49 MSIHHRPPPSSSALKWLGLVTAVWVQSISGNNYTFSNYSAALKSLMNLSQLQLNNLSVAKDLGKAFGLLAGLASDRFSTSLLLLIGSIEGLIGYGAQWLVVSQKIKPLPYWQMCIFLCMGGNSTTWMNTGVLVTCLRNFRRNRGTVSGILKGYIALSTAIFTDLCTALFSDNPSSFLALLSLTPFAVCLTAVLFLREIPCSADNETEDSRYFWVLNAVSVAVAVILLAFDSIPNPTSSVSRIFSMVLLILLASPLVIPLHSFVKNRGQSGEVAEALLADESAVEGAEEGKPVIGEDHTIVEAMKTVEFWILFGSFLCGVGTGLAVMNNMGQIGLALGYDEVSIFISLMSIWGFFGRILSGSVSEHFIKKAGMPRPLWNAASQILMALGYILLAIAMPGSLYIGSVVVGICYGVRLAITVPMASEVFGLKNYGMIYNVLILNLPLGSFLFSGLLAGILYDWEATTTKEGGNMCVGGHCYRLVFVVMACSCVVGFAMDLFLAFRTKRLYSKMRGLKG 515
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 4035966 4040134 + CmPI595203_02g004400.1 Cmu02g0440 408489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0440 515 Gene3D MFS general substrate transporter like domains 301 506 IPR036259 -
Cmu02g0440 515 Gene3D MFS general substrate transporter like domains 13 208 IPR036259 -
Cmu02g0440 515 CDD MFS_Mch1p_like 14 492 - -
Cmu02g0440 515 Pfam Nodulin-like 15 259 IPR010658 -
Cmu02g0440 515 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 15 509 - GO:0016020(PANTHER)
Cmu02g0440 515 SUPERFAMILY MFS general substrate transporter 8 505 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0440 Cmu-Chr2:4035966 Cmu07g1214 Cmu-Chr7:27467527 1.80E-94 dispersed
Cmu02g0440 Cmu-Chr2:4035966 Cmu02g1181 Cmu-Chr2:24473580 6.30E-212 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0440 - - - 0.0