Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0582 ATGGCTTCTCCTTCTTCTTCCTCTGAACTTCCTCTCAAACCCATTCCTGGGGGCTATGGCTTCTCCTTCCTCGGTCCGATCAAAGACCGTTATGACTATTTCTACTTCCAAGGCAAAGATGAATTTTTCCGTTCCCGAATGACCAAATATCGCTCCAGCGTCTTCCGCGCCAACATGCCGCCGGGCCCCTTCATCTCCTCCAATTCCAGAGTCATCGTACTTCTCGACGCCATCAGTTTTCCGATCCTCTTCGACACCACCAAGGTCGAAAAACGCAACATTCTCGATGGAACTTACATGCCCTCCTTGTCCTTCACCGGCGGCATTCGCACCTGCGCTTATTTGGACCCATCGGAAACAGAGCACTCTGTTCTCAAACGCCTCTTCCTCTCGTTTCTCGCCTCTCGTCATGACAGGTTCATCCCTCTGTTTCGAAGCTCCTTGTCTGAGATGTTCGTTAAGCTTGAAGATAAACTCGCGGAGAAGAAGAAATTCGCCGATTTCAACCCGATTAGTGATTCCATGTCGTTTGATTACATTTTCCGTCTACTCTCCGATGGAACTCCTGATTCAAAATTAGCCGCCGATGGACCTGGAATGTTCGATTTATGGCTTTCCTTTCAGCTCGCCCCACTGGCTTCCATTGGGGTTCCGAAAATTTTCACAGTTTTTGAAGATCTCATCATTCATACCATTCCCCTGCCTTTCTTTCCAGTCAAAAGTGGTTATAGGAAGCTTTACAATGCGTTTTACTCCTCCTCTGGAACATTTCTAGACGAAGCAGAAAAACAGGGGATAGACAGAGAGAAAGCGTGTCACAATTTAGTGTTTCTCGCCGGATTCAACGCCTACGGCGGAATGAAAGTGCTTTTTCCAACTTTACTAAAATGGGTAGGCACCGCCGGCGAGGATCTCCACCGGAAGATCGCTGACGAAGTCAGAGCCACCGTGAAGGAAGAAGGTGGATTGACTTTCGCCGCCTTGGAGAAAATGAGTCTCCTGAAATCCGTCGTGTACGAGGCTCTGAGGATCGAACCGCCGGTGCCGTTCCAGTATGGGAAGGCGAAGGAGGACATCGTGATTCAGAGCCATGATTCTTCTTTCAAGATCAAGAAAGGGGAGACGATTTTTGGTTATCAGCCATTTGCTACTAAAGATCCGAAGATTTTTGAGAATTCGGAGGAGTTCGTCGGTGATAGGTTCGTCGGAGAAGAAGGGGAGAAGCTTCTGAAATATGTTTACTGGTCAAACGACCGGGAGACGGTGCAGCCAACGGCGGAGAACAAGCAGTGTCCCGGGAAGAATCTGGTGGTGCTGATGGGCAGGATTATTCTGGTGGAATTCTTCCTCCGGTATGATACATTCACTGTCGACGTCACAGAGTTGCCGCTCGGTCCGGCGGTGAAGTTCAAGTCTCTAACCAAAGCCACCGAGTAA 1437 49.13 MASPSSSSELPLKPIPGGYGFSFLGPIKDRYDYFYFQGKDEFFRSRMTKYRSSVFRANMPPGPFISSNSRVIVLLDAISFPILFDTTKVEKRNILDGTYMPSLSFTGGIRTCAYLDPSETEHSVLKRLFLSFLASRHDRFIPLFRSSLSEMFVKLEDKLAEKKKFADFNPISDSMSFDYIFRLLSDGTPDSKLAADGPGMFDLWLSFQLAPLASIGVPKIFTVFEDLIIHTIPLPFFPVKSGYRKLYNAFYSSSGTFLDEAEKQGIDREKACHNLVFLAGFNAYGGMKVLFPTLLKWVGTAGEDLHRKIADEVRATVKEEGGLTFAALEKMSLLKSVVYEALRIEPPVPFQYGKAKEDIVIQSHDSSFKIKKGETIFGYQPFATKDPKIFENSEEFVGDRFVGEEGEKLLKYVYWSNDRETVQPTAENKQCPGKNLVVLMGRIILVEFFLRYDTFTVDVTELPLGPAVKFKSLTKATE 478
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 5557585 5561097 - CmPI595203_02g005820.1 Cmu02g0582 408631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0582 478 CDD CYP74 44 471 - -
Cmu02g0582 478 FunFam Allene oxide synthase, chloroplastic 10 478 - -
Cmu02g0582 478 Gene3D Cytochrome P450 10 478 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0582 478 PRINTS E-class P450 group IV signature 431 449 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0582 478 PRINTS E-class P450 group IV signature 384 402 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0582 478 PRINTS E-class P450 group IV signature 331 347 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0582 478 SUPERFAMILY Cytochrome P450 11 464 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0582 478 Pfam Cytochrome P450 305 415 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cmu02g0582 478 PANTHER CYTOCHROME P450 26 15 452 - GO:0016125(PANTHER)|GO:0016491(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0582 Cmu-Chr2:5557585 Cmu08g1481 Cmu-Chr8:26788036 1.60E-145 dispersed
Cmu02g0581 Cmu-Chr2:5548860 Cmu02g0582 Cmu-Chr2:5557585 1.60E-212 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0582 K01723 - csv:101211324 878.626