Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0631 ATGGGTATCTTTTCAAAGCAAAAAATCTGGAGAGCAGGAACGACCCATGATGATTCGATAGGTTTTAATGGGGTTTCTACAGCGAGCAAGAGGAAATGGACCCGTTTTTTGCCTCTGTTTGTGGCCATGGTGGTCATAGCAGAGATCGCTTCTCTTAGTCGGCTCGACATGGCGAAAAATGCGGCTATGGTGGATTCTTGGGTCGACTTGTTCTATGGATCTCCGCTTTTGCAAGAAGGCAATGAAATGTCTATTGATGATGGAGGAATTGATAGAGTTAGCTGTGAGGAGTGGCTGGAGAAGGAAGATGCTGTGGAGTATTCTAGGGACTTCAAAAGGAAACCTGTTTTGGTTTCTGGTTCCGAGAAGGAGTGGAGAACTTGTGATGTGGGATGCCAGTTTGGATTTAATCCTGGCCAGCAGCCTGATGCTATATTCGGATCACCTCATCAAGGTAGTGCTGCTAGTGTACTTCGATCCATGGAATCATCGCATTACTATCCAGAAAACAATATTGCTTTGGCAAGACGGAAGGGTTATACCGTGGTTATGACCACTAGTCTATCATCAGATGTTCCTGTTGGATATTTTTCATGGGCAGAATACGAGATAATGGCACCAGTGCAACCAAAAACGGAGCCTGCCCTTGCAGCTGCCTTCATTTCAAATTGTGGTGCCCGCAACTTCCGTTTGCAAGCTCTTGATGCGCTTGAGAAATTGAATGTCAAAATTGATTCATATGGTAGTTGCCACAGGAACCGCGATGGAAGAGTTGATAAAGTGGAAACTTTGAAGCGCTACAAGTTCAGCTTGGCTTTTGAGAATTCCAATGAGGAAGATTATGTCACGGAAAAGTTTTTTCAATCTCTTGTTGCAGGAACTATTCCGGTGGTGGTTGGCGCTCCAAACATTGAGGAGTTTGCTCCTTCTCCTGATTCATTTTTGCACATCAAGGAATTTTCGGATGTTGAGTCAATTGCCAAGTCCATGAAATACCTTGCTGAAAATCCCCAAATGTACAATCAATCGATAAGATGGAAGTATGACGGTCCATCTGAGTCTTTCAAGGCCCTTGTCGATATGGCAGCAGTACACTCATCATGCCGCCTTTGCATCCATATGGCAACCATCATCCACGAGAAAGAAGAAAACAGTCCCCGGTTCAAGAAACGGCCGTGCAAGTGTTCTCGAGGCTCTGATACCATGTATCATTTATACGTAAGGGAGAGAGGGAGGTTTGAAATGCAATCCATTTTCTTGAGGTCAGGAAATTTGACGTTGGAGGCTTTAGAATTGAGGGTACTCGAAAAGTTCAATTCTTTGAAACACGTACCAATTTGGAAGCAAGAACGGCCCGAAAGCATAAGAGGAGGAGATGAACTAAAACTATACAGAATATATCCTGTTGGGTTGACTCAGAGGCAGGCTTTATATACCTTCAGATTCAAAGACAATAATCATTTCAGAACTCACATAGAAACACACCCTTGTGCTAAGATGGAAGTCATATTTGTCTGA 1518 43.68 MGIFSKQKIWRAGTTHDDSIGFNGVSTASKRKWTRFLPLFVAMVVIAEIASLSRLDMAKNAAMVDSWVDLFYGSPLLQEGNEMSIDDGGIDRVSCEEWLEKEDAVEYSRDFKRKPVLVSGSEKEWRTCDVGCQFGFNPGQQPDAIFGSPHQGSAASVLRSMESSHYYPENNIALARRKGYTVVMTTSLSSDVPVGYFSWAEYEIMAPVQPKTEPALAAAFISNCGARNFRLQALDALEKLNVKIDSYGSCHRNRDGRVDKVETLKRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIEEFAPSPDSFLHIKEFSDVESIAKSMKYLAENPQMYNQSIRWKYDGPSESFKALVDMAAVHSSCRLCIHMATIIHEKEENSPRFKKRPCKCSRGSDTMYHLYVRERGRFEMQSIFLRSGNLTLEALELRVLEKFNSLKHVPIWKQERPESIRGGDELKLYRIYPVGLTQRQALYTFRFKDNNHFRTHIETHPCAKMEVIFV 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6210092 6215708 - CmPI595203_02g006310.1 Cmu02g0631 408680

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0631 505 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 381 - -
Cmu02g0631 505 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 63 477 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Cmu02g0631 505 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 215 376 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
Cmu02g0631 505 Gene3D - 161 354 IPR038577 -
Cmu02g0631 505 FunFam Glycoprotein 3-alpha-L-fucosyltransferase A 162 354 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0631 K00753 - - csv:101205170 973.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0631 Cmu-Chr2:6210092 Cmu05g1114 Cmu-Chr5:10562988 2.40E-208 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi3g408 Blo02g00831 Blo15g00748 Bda06g01072 Bda08g00885 . . Bma05g00514 . Cmo19g00620 . . . . . . . Cpe15g00486 Bhi05g01063 . . . . . . Cla02g00602 Cam02g0631 Cec02g0631 Cco02g0650 Clacu02g0635 Cmu02g0631 Cre02g0955 . . Cone3ag1179 Cone10ag0987 . Csa07g00757 . Cme01g00052 . . . . . . . . . . . . Cma19g00602 . Car19g00455 Cpe14g00294 Cpe01g00439 . . . . . . . . . . . . . . . . Chy01g00056 .
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Cmu05g2460 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.3 1.9e-158 556.2
Cmu04g1250 . 113 583 Xyloglucan Fucosyltransferase1 AT1G14080 54.8 5.0e-151 531.6
Cmu05g2460 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.9 1.8e-166 582.8
Cmu04g1250 . 115 583 Xyloglucan Fucosyltransferase1 AT1G14100 57.9 1.1e-160 563.5
Cmu07g1065 . 56 543 Xyloglucan Fucosyltransferase1 AT1G14100 50.2 5.0e-140 495.0
Cmu05g2460 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.5 7.3e-138 487.6
Cmu04g1250 . 106 585 Xyloglucan Fucosyltransferase1 AT1G14110 51.6 1.9e-133 473.0
Cmu02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT1G49710 64.6 5.6e-192 667.5
Cmu05g1114 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 62.1 2.1e-183 639.0
Cmu08g0813 . 7 406 Xyloglucan Fucosyltransferase1 AT1G71990 69.7 2.3e-169 592.0
Cmu05g2460 . 58 539 Xyloglucan Fucosyltransferase1 AT1G74420 50.5 2.6e-126 449.5
Cmu05g2460 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.1 9.3e-180 627.1
Cmu04g1250 . 117 584 Xyloglucan Fucosyltransferase1 AT2G03210 60.4 3.3e-169 592.0
Cmu05g2460 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.2 5.5e-201 697.6
Cmu04g1250 . 59 581 Xyloglucan Fucosyltransferase1 AT2G03220 61.4 4.1e-188 654.8
Cmu05g2460 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.9 4.2e-155 545.0
Cmu04g1250 . 95 584 Xyloglucan Fucosyltransferase1 AT2G15350 50.3 4.3e-144 508.4
Cmu05g2460 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.4 1.2e-149 526.9
Cmu04g1250 . 106 584 Xyloglucan Fucosyltransferase1 AT2G15370 50.1 2.8e-138 489.2
Cmu05g2460 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 55.1 5.3e-153 538.1
Cmu04g1250 . 115 583 Xyloglucan Fucosyltransferase1 AT2G15390 52.5 8.5e-143 504.2
Cmu02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT3G19280 63.9 3.9e-190 661.4
Cmu05g1114 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 63.0 7.6e-186 647.1
Cmu05g2460 . 58 539 Xyloglucan Fucosyltransferase1 AT1G74420 50.5 2.6e-126 449.5
Cmu05g2460 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.1 9.3e-180 627.1
Cmu04g1250 . 117 584 Xyloglucan Fucosyltransferase1 AT2G03210 60.4 3.3e-169 592.0
Cmu05g2460 . 36 566 Xyloglucan Fucosyltransferase1 AT2G03220 64.2 5.5e-201 697.6
Cmu04g1250 . 59 581 Xyloglucan Fucosyltransferase1 AT2G03220 61.4 4.1e-188 654.8
Cmu05g2460 . 6 566 Xyloglucan Fucosyltransferase1 AT2G03210 55.1 9.3e-180 627.1
Cmu04g1250 . 117 584 Xyloglucan Fucosyltransferase1 AT2G03210 60.4 3.3e-169 592.0
Cmu05g2460 . 58 539 Xyloglucan Fucosyltransferase1 AT1G74420 50.5 2.6e-126 449.5
Cmu05g2460 . 92 565 Xyloglucan Fucosyltransferase1 AT2G15390 55.1 5.3e-153 538.1
Cmu04g1250 . 115 583 Xyloglucan Fucosyltransferase1 AT2G15390 52.5 8.5e-143 504.2
Cmu05g2460 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15370 54.4 1.2e-149 526.9
Cmu04g1250 . 106 584 Xyloglucan Fucosyltransferase1 AT2G15370 50.1 2.8e-138 489.2
Cmu05g2460 . 100 565 Xyloglucan Fucosyltransferase1 AT1G14080 57.3 1.9e-158 556.2
Cmu04g1250 . 113 583 Xyloglucan Fucosyltransferase1 AT1G14080 54.8 5.0e-151 531.6
Cmu05g2460 . 80 566 Xyloglucan Fucosyltransferase1 AT1G14100 58.9 1.8e-166 582.8
Cmu04g1250 . 115 583 Xyloglucan Fucosyltransferase1 AT1G14100 57.9 1.1e-160 563.5
Cmu07g1065 . 56 543 Xyloglucan Fucosyltransferase1 AT1G14100 50.2 5.0e-140 495.0
Cmu05g2460 . 101 570 Xyloglucan Fucosyltransferase1 AT1G14110 53.5 7.3e-138 487.6
Cmu04g1250 . 106 585 Xyloglucan Fucosyltransferase1 AT1G14110 51.6 1.9e-133 473.0
Cmu05g2460 . 101 565 Xyloglucan Fucosyltransferase1 AT2G15350 54.9 4.2e-155 545.0
Cmu04g1250 . 95 584 Xyloglucan Fucosyltransferase1 AT2G15350 50.3 4.3e-144 508.4
Cmu02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT3G19280 63.9 3.9e-190 661.4
Cmu05g1114 . 1 514 Xyloglucan Fucosyltransferase1 AT3G19280 63.0 7.6e-186 647.1
Cmu02g0631 . 1 505 Xyloglucan Fucosyltransferase1 AT1G49710 64.6 5.6e-192 667.5
Cmu05g1114 . 1 514 Xyloglucan Fucosyltransferase1 AT1G49710 62.1 2.1e-183 639.0
Cmu08g0813 . 7 406 Xyloglucan Fucosyltransferase1 AT1G71990 69.7 2.3e-169 592.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001699 7 4 2 3 2 2 2 2 2 2 2 2 2 2 2 2 2 3 2 2 2 2 2 2 2 2 2 2 4 1 70