Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cmu02g0661 | ATGGCGATTTCCCCCACTTTCTCCTTCCCCATCCTTGCTTTTCTTGCCCTCTTCCTCTGTTTTTCCCCATTTTCATCCGCTTCCCTTTCATCCACCTTCTCCATCATCGATGAAAATGCAAAACACCACCTGGGTATCCCCGAAATTGCCGATTCTGATGCCCAAGGATCCCCTCAACGGACCGACGCCGAGGTTGCGGCTCTGTACGAGTCCTGGTTGGTCCATCATGGAAAAGCCTACAACGCTCTCGGCGAGAAGGAGAGGCGGTTTGAGATTTTCAAGGATAATCTCAGGTTCATCGATGAACATAACCGGGAATCGCGGACGTATAAAGTTGGTTTGACCCGTTTCGCCGATCTCACCAATGAGGAGTATCGGGCAAAGTTTTTGGGTGGCCGAATCTCCCGGAAGCCTCGCCTATCTGCCGTCAAGAGCGGTAGATACGCGGCTACGCTCGGCGATGATCTTCCGGATCATGTCGATTGGAGAAAGAAGGGCGCTGTTGCGGCTGTTAAAGATCAAGGACAGTGTGGGAGCTGTTGGGCTTTCTCAACAGTTGCTGCAGTGGAAGGAATAAATCAAATCACCACCGGTGAATTGATCTCTCTGTCGGAGCAGGAACTTGTGGACTGTGACAAATCATATAACATGGGGTGCAATGGTGGTCTTATGGACTATGCTTTCCAGTTCATCATTGATAATGGTGGAATTGACACTGACGAAGATTACCCTTACAAGGGCCATGATGGTGCTTGTGATCCCAACCGGAAAAATGCCAAGGTTGTAACCATAGATGGATATGAAGATGTTCCTGAGAATGATGAGAGCTCCTTGAAAAAGGCTGTGGCAAGTCAACCAGTTAGTGTTGCCATTGAAGCTGGTGGCAGAGCCTTCCAACTTTACCAATCGGGTGTCTTCACTGGCCGTTGCGGAACCAATCTGGATCACGGTGTTGTCGCTGTTGGATATGGTACAGACAATGGTACAGATTATTGGATTGTGAGGAATTCATGGGGTAAAAACTGGGGAGAGAGTGGTTATATCAGGTTGGAGAGAAATGTGGCCAATATTACCACAGGCAAGTGTGGTATAGCAGTAGAGCCTTCATACCCCATCAAAACCGGAATGAACCCTCCAAAACCTGCTGCTTCTCCACCATCTCCTGTGAAGCCCCCGACCGAATGTGATGACTACTTCTCATGCGAGGAAGGAACTACCTGCTGCTGTATCTATCAATATGGAAGCACCTGCTTTGGTTGGGGATGCTGCCCGCTTGAATCCGCAACCTGCTGCGATGACCATTACAGTTGCTGCCCCCATGAATATCCAATCTGTGACCTCGAGGCAGGAACTTGCCTAATGAGCAAAGGCAGCACGATGGGAGTCAAACTGCTGAAGCGCCTTCCTGCGAAACGTACAAGAGGCATTGAGAAGCTTGGGAAGTTGTTTGTTGTCGCTGGTGCTTGGGATTTCTTGTGCCCTAGGCACCTTACGTGTGATCGTATCAACAGGTGGTGTTTTGATATTCCTAATGAACTTGTTTTGTACACTGGTAGTGATGAGACTAGGGACCTTGTTCTGTGCATTGGTAGTGACGAGACTAGGGACCGTTTATTTTTTTTATTGCCTTTTCAGCCAAGCTGTCTAGATCATATCATGGATCCAAATTCTACTGATTCCTCAACATCACCTACTGTTAATTCCTCGGAAACTAAACCACCAGAAGTACAGCCTCAGGCTCCTGCTACCACTGGAATGGATAATGTAACCCGTGATGCACCGTCTAAGCTATCTCCTAGTGGCATAACTTCATGGGCCAAAAACTTGAAAATTTCTCAACCACAGTCAGCTTCACAAGATGGAACGACTGATAATGCTGCTGGGAAGTCAGCTTTTGCACGTTTTACTAGTGGCTTAGGTTTGAACTTATCTCCAAAATCTGCTGCTTCTAATGATTCCCCAGATGGAACTTCTAAACCTGCCCAACCCAGTTTTGTGGGATCAATTACAAGAGGATTGGTTGACTCTTCAAAGAGTGCTGTAAAGGCTGTACAAGTTAAAGCTCGTCATGTTGTCTCCCAAAATAAGCGAAGATACCAGGAAGGTGGATTTGATTTGGATATGACTTATATTACTGAAAATATCATTGCCATGGGTTTTCCTGCTGGTGACATGAGCTCAGGGTTTTTTGGATATGTTGAGGGTTTCTACAGGAACCATATGGAAGAAGTCATCAAGTTCTTTGAATCACATCACAAGGGAAAATACAAAGTATATAATCTTTGTTCCGAGAGGCTATATGATGCTTCATTATTTGAAGGAAAGGTGGCTTGTTTTCCTTTTGATGACCATAACTGTCCCCCACTTCAACTCATAATATCATTTTGCCAAAGTGCTTATTCATGGCTGAAGGATGATATTGAAAATGTAGTGGTTGTGCATTGCAAGGCAGGAATGGCCAGGACAGGCTTGATGATTTCCAGCCTTCTTCTGTTTCTGAAGTTCTTTCCAACCGCTGAAGAATCCATTGAATACTACAACCAGAGAAGGTGTTTTGATGGCAAAGGTCTGGTTTTACCAAGTCAGATTAGGTATGTCAAATATTTTGAGCGTATTCTAACATACTTCAATGGAGAAAATCCTCCCAGTCGCAGATGTGTGCTTAGAGGGTTTCGTCTCCACAGATGCCCATATTGGATCAGGCCTTCCATTACTGTATCTGACCATAATGGTGTTCTGTTCTCCACTAAAGTACATCCAAGAACCAAGAGTCTCTCGCCAGAAGATTTTTGGTTTACTGCACCAAAGAAGGGGATAATGGTCTTTGCCTTGCCTGGGGAGCCTGGTCTAGCTGAGTTATGTGGGGACTTCAAGGTTCATTTTCACGACCGCCAAGGAGATTTCTATTGTTGGCTAAACACAACCATGACCGAAAATCGGAAAATGCTGTACACGAATGATCTTGATGGGTTTGACAAGAGGAAACTACCTTCCCCCGGATTTCAGGTGGAGGTTGTTCTAGTTGATACGTCGCCCAACATGGACAATACTACCAAGAAGTCGGATGAAAGCTCAGGCTCAAGACCTTCTGCAGCTGATGGAAGTGAAGTTTCTGAGAACCAAAACAGAAAATCAGGAACTAATGATAGAGATGATGTATTTTCTGATAGTGAATCAGAAGGTGGTTCTTCAAAGAGTAAGAAGGAGGCAACTTCAGGTTCAGGGAATGATGGATCAGCTGTCAAGCCGGCATCTAAATCTCAAACAAGTACGACTTCATCAGATGATGTTGCGAGTTTAACACATGCAACAAAGCAAGTTTCCCTGGGAGATGGTGGAGCTAAACAGACTGCTCCTCCCAGTGATCGAAAAGGCGATGGAGCTGGAAGATCTGATTCTCTCCCAGAAGTTCCAAACTCAGAAAGTGAATTCAAGGCAATGGCTGCTGATGCTTCTGTTTTCACATTTGGCGACGACGAAGACTATGAGAATTGCACGGCTACTTTATCAGTTCCTTTGATTTGTACTCATTACTCAAGTCCTTGTGCTCTTGTTTCTTGCGTCAGTCAATGGCTTGAGTCTAAGCGTGAGCAACTGTCGAAGGAGACGCGGCATCGGCAATATAATTGCGAAAGAGAAGTTTCTGGGGATTCAATTTCTTCGCCCTCTACTCTCAACGATTTCTCAGTTTTTGTTTTGTGGGTTGTGCTCGAAATATTCTATTCTGGTTGGTTCCCTTCAGAAAAGGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCTTATGTGTGCCTTGAATATGGTAGTACAAAGTTTCGCACCACCACTTGCACAGATGGTGGAAGAAATCCCACATTCCAAGAGAAATTTGTGTTTTCTCTTATTGAAGGGCTAAGAGAGATTAATGTCACAGTTTGGAACAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATCCAATTGGCAAAAGTTCTGGCAGAAGGGTATGATGACAGTTCATGGTCACTTCAAACTAAAACTGGCAGACATGCTGGGGAAGTGCGACTGATCTTACATTTTGCAAATGCCAATAGACCGTCGTCAAGTTTTGCTCCCTCGGCACCACCATTTCTTGCACCTACTCCACCCCAAGTCCCTGCATATGCTACGATGCCACCGGCACACCCGACAGCCTACCCTCCTCCTAGTGCTACACCGTATGCATCATTTCAATCTCCCTATCCTTCTTACCCACCCAGCTCTGGAGCATATCAAACATCCATGTACTCCCCATATCCATCTGGGTATCCTCCCACATCGTACCCGCTGCCTCCCTCGGGTTATCCTCCCAGTCCCTACCCACCACCTCCACAAGCCTCACCCTTCTATCCTCCAGGTCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA | 4440 | 45.72 | MAISPTFSFPILAFLALFLCFSPFSSASLSSTFSIIDENAKHHLGIPEIADSDAQGSPQRTDAEVAALYESWLVHHGKAYNALGEKERRFEIFKDNLRFIDEHNRESRTYKVGLTRFADLTNEEYRAKFLGGRISRKPRLSAVKSGRYAATLGDDLPDHVDWRKKGAVAAVKDQGQCGSCWAFSTVAAVEGINQITTGELISLSEQELVDCDKSYNMGCNGGLMDYAFQFIIDNGGIDTDEDYPYKGHDGACDPNRKNAKVVTIDGYEDVPENDESSLKKAVASQPVSVAIEAGGRAFQLYQSGVFTGRCGTNLDHGVVAVGYGTDNGTDYWIVRNSWGKNWGESGYIRLERNVANITTGKCGIAVEPSYPIKTGMNPPKPAASPPSPVKPPTECDDYFSCEEGTTCCCIYQYGSTCFGWGCCPLESATCCDDHYSCCPHEYPICDLEAGTCLMSKGSTMGVKLLKRLPAKRTRGIEKLGKLFVVAGAWDFLCPRHLTCDRINRWCFDIPNELVLYTGSDETRDLVLCIGSDETRDRLFFLLPFQPSCLDHIMDPNSTDSSTSPTVNSSETKPPEVQPQAPATTGMDNVTRDAPSKLSPSGITSWAKNLKISQPQSASQDGTTDNAAGKSAFARFTSGLGLNLSPKSAASNDSPDGTSKPAQPSFVGSITRGLVDSSKSAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFESHHKGKYKVYNLCSERLYDASLFEGKVACFPFDDHNCPPLQLIISFCQSAYSWLKDDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESIEYYNQRRCFDGKGLVLPSQIRYVKYFERILTYFNGENPPSRRCVLRGFRLHRCPYWIRPSITVSDHNGVLFSTKVHPRTKSLSPEDFWFTAPKKGIMVFALPGEPGLAELCGDFKVHFHDRQGDFYCWLNTTMTENRKMLYTNDLDGFDKRKLPSPGFQVEVVLVDTSPNMDNTTKKSDESSGSRPSAADGSEVSENQNRKSGTNDRDDVFSDSESEGGSSKSKKEATSGSGNDGSAVKPASKSQTSTTSSDDVASLTHATKQVSLGDGGAKQTAPPSDRKGDGAGRSDSLPEVPNSESEFKAMAADASVFTFGDDEDYENCTATLSVPLICTHYSSPCALVSCVSQWLESKREQLSKETRHRQYNCEREVSGDSISSPSTLNDFSVFVLWVVLEIFYSGWFPSEKVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEKFVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGEVRLILHFANANRPSSSFAPSAPPFLAPTPPQVPAYATMPPAHPTAYPPPSATPYASFQSPYPSYPPSSGAYQTSMYSPYPSGYPPTSYPLPPSGYPPSPYPPPPQASPFYPPGPYPGVYPPPQY | 1479 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 6551902 | 6569666 | + | CmPI595203_02g006610.1 | Cmu02g0661 | 408710 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cmu02g0661 | 1479 | Gene3D | Cysteine proteinases | 52 | 374 | - | - | |
Cmu02g0661 | 1479 | MobiDBLite | consensus disorder prediction | 644 | 664 | - | - | |
Cmu02g0661 | 1479 | Pfam | PTEN2, C2 domain | 884 | 1010 | - | - | |
Cmu02g0661 | 1479 | ProSiteProfiles | C2 domain profile. | 1222 | 1344 | IPR000008 | - | |
Cmu02g0661 | 1479 | Gene3D | Granulin | 392 | 455 | IPR037277 | - | |
Cmu02g0661 | 1479 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 811 | 850 | IPR000387 | GO:0016311(InterPro) | |
Cmu02g0661 | 1479 | SMART | GRAN_2 | 395 | 452 | IPR000118 | - | |
Cmu02g0661 | 1479 | ProSitePatterns | Eukaryotic thiol (cysteine) proteases asparagine active site. | 331 | 350 | IPR025661 | - | |
Cmu02g0661 | 1479 | ProSiteProfiles | Phosphatase tensin-type domain profile. | 697 | 876 | IPR029023 | - | |
Cmu02g0661 | 1479 | SMART | Inhibitor_I29_2 | 69 | 125 | IPR013201 | - | |
Cmu02g0661 | 1479 | MobiDBLite | consensus disorder prediction | 1066 | 1106 | - | - | |
Cmu02g0661 | 1479 | MobiDBLite | consensus disorder prediction | 1009 | 1042 | - | - | |
Cmu02g0661 | 1479 | MobiDBLite | consensus disorder prediction | 1006 | 1142 | - | - | |
Cmu02g0661 | 1479 | PRINTS | Papain cysteine protease (C1) family signature | 331 | 337 | IPR000668 | GO:0006508(InterPro)|GO:0008234(InterPro) | |
Cmu02g0661 | 1479 | PRINTS | Papain cysteine protease (C1) family signature | 316 | 326 | IPR000668 | GO:0006508(InterPro)|GO:0008234(InterPro) | |
Cmu02g0661 | 1479 | PRINTS | Papain cysteine protease (C1) family signature | 174 | 189 | IPR000668 | GO:0006508(InterPro)|GO:0008234(InterPro) | |
Cmu02g0661 | 1479 | MobiDBLite | consensus disorder prediction | 553 | 599 | - | - | |
Cmu02g0661 | 1479 | SMART | C2_3c | 1245 | 1342 | IPR000008 | - | |
Cmu02g0661 | 1479 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 710 | 878 | IPR029021 | - | |
Cmu02g0661 | 1479 | MobiDBLite | consensus disorder prediction | 1442 | 1479 | - | - | |
Cmu02g0661 | 1479 | FunFam | Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 | 682 | 879 | - | - | |
Cmu02g0661 | 1479 | CDD | Peptidase_C1A | 157 | 371 | IPR039417 | - | |
Cmu02g0661 | 1479 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 1249 | 1374 | IPR035892 | - | |
Cmu02g0661 | 1479 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 813 | 823 | IPR016130 | GO:0016311(InterPro) | |
Cmu02g0661 | 1479 | Pfam | C2 domain | 1249 | 1341 | IPR000008 | - | |
Cmu02g0661 | 1479 | FunFam | Cysteine protease 1 | 51 | 374 | - | - | |
Cmu02g0661 | 1479 | SMART | pept_c1 | 156 | 372 | IPR000668 | GO:0006508(InterPro)|GO:0008234(InterPro) | |
Cmu02g0661 | 1479 | FunFam | Cysteine protease 1 | 392 | 455 | - | - | |
Cmu02g0661 | 1479 | Pfam | Granulin | 406 | 453 | IPR000118 | - | |
Cmu02g0661 | 1479 | CDD | PTP_PTEN | 707 | 872 | IPR045101 | GO:0016791(InterPro) | |
Cmu02g0661 | 1479 | PANTHER | PHOSPHATASE WITH HOMOLOGY TO TENSIN | 684 | 1102 | IPR051281 | GO:0005829(PANTHER)|GO:0016311(PANTHER)|GO:0016314(PANTHER) | |
Cmu02g0661 | 1479 | ProSitePatterns | Eukaryotic thiol (cysteine) proteases cysteine active site. | 174 | 185 | IPR000169 | - | |
Cmu02g0661 | 1479 | Gene3D | Protein tyrosine phosphatase superfamily | 682 | 879 | IPR029021 | - | |
Cmu02g0661 | 1479 | SMART | PTEN_C2_2 | 881 | 1009 | IPR014020 | - | |
Cmu02g0661 | 1479 | SUPERFAMILY | Granulin repeat | 392 | 426 | - | - | |
Cmu02g0661 | 1479 | Pfam | Papain family cysteine protease | 156 | 372 | IPR000668 | GO:0006508(InterPro)|GO:0008234(InterPro) | |
Cmu02g0661 | 1479 | ProSiteProfiles | C2 tensin-type domain profile. | 883 | 1010 | IPR014020 | - | |
Cmu02g0661 | 1479 | CDD | C2 | 1249 | 1343 | - | - | |
Cmu02g0661 | 1479 | Gene3D | C2 domain | 1248 | 1364 | IPR035892 | - | |
Cmu02g0661 | 1479 | SUPERFAMILY | Cysteine proteinases | 61 | 372 | IPR038765 | - | |
Cmu02g0661 | 1479 | MobiDBLite | consensus disorder prediction | 1043 | 1065 | - | - | |
Cmu02g0661 | 1479 | Pfam | Cathepsin propeptide inhibitor domain (I29) | 69 | 125 | IPR013201 | - | |
Cmu02g0661 | 1479 | ProSitePatterns | Eukaryotic thiol (cysteine) proteases histidine active site. | 314 | 324 | IPR025660 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cmu01g1652 | Cmu-Chr1:30256135 | Cmu02g0661 | Cmu-Chr2:6551902 | 1.10E-134 | dispersed | |
Cmu01g1654 | Cmu-Chr1:30274497 | Cmu02g0661 | Cmu-Chr2:6551902 | 3.50E-205 | dispersed | |
Cmu02g0330 | Cmu-Chr2:3040417 | Cmu02g0661 | Cmu-Chr2:6551902 | 2.50E-103 | dispersed | |
Cmu02g0661 | Cmu-Chr2:6551902 | Cmu08g1409 | Cmu-Chr8:26243975 | 5.30E-110 | dispersed | |
Cmu02g0661 | Cmu-Chr2:6551902 | Cmu05g2082 | Cmu-Chr5:30442014 | 1.40E-139 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cmu02g0661 | K01110 | - | csv:101222304 | 1129.01 |