Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0662 ATGGCTTTGCACTCAAATAAACTCAGAACCCAACGCCTCCATAACTCTCTCTTCTTCTTCGACTTCTTCCACTGCACTGAACAACAACACCTTCAAACAGAGCATCCCATTTTCCTCAACAATGGCGGCACCAACAACTTCCCCTTTTTCCAAGAAACAACCCATTTCCATATTTACGAAGACGAGGAGCTCAATCATTTGTTGTCCAAAGAAAAAGACCAGAATCTCCAAGCCGGCGCCGTTTTGAAAACCTTGGTTCAAACAGATAATGCTTTGTCTCTCGCTAGAACAGAGGCCATCGACTGGTTGCTTAAAGTTAATGCCTTTTATGGCTTCTCCTCTCTCACAGCTCTCTTAGCAATTAATTACCTCGATAGAATCCTCTCTGGCCCCCATTTTCAAAGAGATAAGCCATGGATGCTTCAGCTTCTTGCTGTAACTTGCATCTCTTTAGCTGCTAAAGTCGAAGAAATTCGTGTCCCGCTTCTTCTAGATCTCCAGGTGGAAGATTCAAAGTACATTTTTGAAGCGAAAACGATACAGAGAATGGAGCTTTTGGTGCTTACTGCTCTGCAATGGAAGATGCATCCAGTGACCCCTGTTTCGTTTCTTGGCATTATCACAAAAGGGCTTGGAATGAAGAATCAGTACATTCAAAGAGAGTTTCTTAGACGTTGTGAGCGTCTTCTCCTCTCTCTTGTCTCTGATTCGAGGTCGGTGGGGATTCTTCCTTCTGTAATGGCGGTATCAGCAATGGTGAGCGTTGTTGAAGAGATGGGAAGCTGTAACCCATTGGAGGAGTTTCAGGATCAGCTTCTTAATGCCCTCAAAATAAATAAGGGGAGAGTGAAGGAGTGTTGTAAAGTGATAATGGAGGCAAAAGCCAAAGGATCAGGGAAAAGGAAGCATGTGGAGGAGGAAGCAGAATCAGAAGCAGAAGCAGAATCATCAGAAGCAGAAACAGAGGAAGAAGCAGAAGCAGGGAGTCCAAATGGAGTAATGGAGGCTAATTTCAGCTGTGAAAGCTCCAATGATTCGTGGGAAATGGGGTCGATTGTGTCAGAGTACACACATTTCTCTTCTTCTTCTTCTTCCAAAAGAATCAGACCCACTCGATGA 1119 44.15 MALHSNKLRTQRLHNSLFFFDFFHCTEQQHLQTEHPIFLNNGGTNNFPFFQETTHFHIYEDEELNHLLSKEKDQNLQAGAVLKTLVQTDNALSLARTEAIDWLLKVNAFYGFSSLTALLAINYLDRILSGPHFQRDKPWMLQLLAVTCISLAAKVEEIRVPLLLDLQVEDSKYIFEAKTIQRMELLVLTALQWKMHPVTPVSFLGIITKGLGMKNQYIQREFLRRCERLLLSLVSDSRSVGILPSVMAVSAMVSVVEEMGSCNPLEEFQDQLLNALKINKGRVKECCKVIMEAKAKGSGKRKHVEEEAESEAEAESSEAETEEEAEAGSPNGVMEANFSCESSNDSWEMGSIVSEYTHFSSSSSSKRIRPTR 372
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 6588004 6590378 + CmPI595203_02g006620.1 Cmu02g0662 408711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0662 372 CDD CYCLIN_AtCycD-like_rpt2 198 290 - -
Cmu02g0662 372 Pfam Cyclin, N-terminal domain 67 195 IPR006671 -
Cmu02g0662 372 Coils Coil 300 325 - -
Cmu02g0662 372 Gene3D - 65 288 - -
Cmu02g0662 372 SUPERFAMILY Cyclin-like 53 196 IPR036915 -
Cmu02g0662 372 CDD CYCLIN_AtCycD-like_rpt1 95 193 - -
Cmu02g0662 372 SMART cyclin_7 101 189 IPR013763 -
Cmu02g0662 372 SMART Cyclin_C_2 198 318 IPR004367 -
Cmu02g0662 372 MobiDBLite consensus disorder prediction 298 345 - -
Cmu02g0662 372 PANTHER CYCLINS 59 260 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cmu02g0662 372 MobiDBLite consensus disorder prediction 310 325 - -
Cmu02g0662 372 Gene3D - 77 196 - -
Cmu02g0662 372 Pfam Cyclin, C-terminal domain 198 314 IPR004367 -
Cmu02g0662 372 ProSitePatterns Cyclins signature. 96 127 IPR048258 -
Cmu02g0662 372 FunFam D6-type cyclin 79 196 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu01g1656 Cmu-Chr1:30302140 Cmu02g0662 Cmu-Chr2:6588004 3.40E-57 dispersed
Cmu02g0662 Cmu-Chr2:6588004 Cmu05g2087 Cmu-Chr5:30474705 1.50E-58 dispersed
Cmu02g0662 Cmu-Chr2:6588004 Cmu05g1129 Cmu-Chr5:10739815 1.30E-68 wgd
Cmu02g0662 Cmu-Chr2:6588004 Cmu08g1552 Cmu-Chr8:27353605 1.30E-68 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0662 K14505 - csv:101222066 555.444