Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0698 ATGGACCCGCCGGAGTACCACAAGCCATCCGTCCGAACTTCGAAGAAGCGCGACTCGGAGGAGCACTCTTTGCAACAGGCCACTGCCAACAAGAGACCCGTACTTGGCGAGATCACTAACTCATTGATCTTCAGTTCGAGCCAGTGCTCCTTTTCTGATCAGGAGATGACGGATAAGGATCTGGACAAAGAGGAATTACCTGAAGGAAGGTCGGCTGACCGTTCGGAGAAATCTGGCTCTGCATTTAGCATTTATAACCATCTTCGATCTCTGGAGATGGAATTACACGTGAAGTTACTGTCCAACAACATTGAAAAGGCTTACAATAGTGATTCCAGTTTAACTTTCACTCGTATGCGAGAAATTCTAGTGGATTGGTTAGTAGAGGTTGCTGAGGAATACAAGCTTGTGTCGGACACCCTATATCTCACCATATCACATATTGACAGATACCTATCCTGGCATGCTGTTGACAGAAGCAAGCTACAACTTCTTGGCGTTTGTTGCATGCTAATTGCATCGACGCATGAAGAGATCAGTCCTCCACATGTTGAAGACTTCTGCTATATAACAGATAATACTTATACCAAAGAACAGGTACTGAATATGGAGAGAGAAGTACGCAAATTCTTGACCTGTGAAGGCGCCCCCACGATAAAAGTTTTCCTCAGAATATATACAAAAGTTGCTTTAGAAAATTGGAAGCAGGCTCAAGATTTGCAATTTGAGTTATTGAGTTGTTATCTCGCGGAGCTAAGTTTGTTAGATCACCGTTGTGTACATATCTTACCTTCAAAAGTCGCTGCATCAGCCATTTTTCTTTCTAGATTCACAATCCAACCAGAGAAACATCCTTGGTGTTTAGCACTACAACGTTACTCCAGTTACAGGCCATCTGAACTAAAGGAATGCATTCTTGCCATTCATGACTTGCAATTAAATAGAAAAGGAAGCTCTTTACTGGCAATCAGAGACAAGTACAAGCAGCATAAGTTCAAGTGTGTGGCGGAGTTATCTTCACCCTCAGAAATTCCTGCATATTATTTTGAGGACATTGATCAGCAATCATTCAACGGGTTCTTAAGAACTTAA 1092 42.49 MDPPEYHKPSVRTSKKRDSEEHSLQQATANKRPVLGEITNSLIFSSSQCSFSDQEMTDKDLDKEELPEGRSADRSEKSGSAFSIYNHLRSLEMELHVKLLSNNIEKAYNSDSSLTFTRMREILVDWLVEVAEEYKLVSDTLYLTISHIDRYLSWHAVDRSKLQLLGVCCMLIASTHEEISPPHVEDFCYITDNTYTKEQVLNMEREVRKFLTCEGAPTIKVFLRIYTKVALENWKQAQDLQFELLSCYLAELSLLDHRCVHILPSKVAASAIFLSRFTIQPEKHPWCLALQRYSSYRPSELKECILAIHDLQLNRKGSSLLAIRDKYKQHKFKCVAELSSPSEIPAYYFEDIDQQSFNGFLRT 363
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7118126 7121300 - CmPI595203_02g006980.1 Cmu02g0698 408747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0698 363 MobiDBLite consensus disorder prediction 1 31 - -
Cmu02g0698 363 MobiDBLite consensus disorder prediction 48 77 - -
Cmu02g0698 363 Gene3D - 97 215 - -
Cmu02g0698 363 SMART Cyclin_C_2 217 341 IPR004367 -
Cmu02g0698 363 SUPERFAMILY Cyclin-like 217 342 IPR036915 -
Cmu02g0698 363 SUPERFAMILY Cyclin-like 84 212 IPR036915 -
Cmu02g0698 363 PANTHER CYCLINS 59 329 IPR039361 GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER)
Cmu02g0698 363 Gene3D - 84 337 - -
Cmu02g0698 363 PIRSF Cyclin_A_B_D_E 2 348 IPR046965 GO:0016538(InterPro)|GO:0044772(InterPro)
Cmu02g0698 363 SMART cyclin_7 221 310 IPR013763 -
Cmu02g0698 363 SMART cyclin_7 125 209 IPR013763 -
Cmu02g0698 363 MobiDBLite consensus disorder prediction 55 75 - -
Cmu02g0698 363 Pfam Cyclin, N-terminal domain 107 211 IPR006671 -
Cmu02g0698 363 FunFam Cyclin A1 202 337 - -
Cmu02g0698 363 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 289 363 IPR005818 GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro)
Cmu02g0698 363 MobiDBLite consensus disorder prediction 1 25 - -
Cmu02g0698 363 Pfam Cyclin, C-terminal domain 217 340 IPR004367 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0698 Cmu-Chr2:7118126 Cmu05g2098 Cmu-Chr5:30546512 7.90E-84 dispersed
Cmu02g0698 Cmu-Chr2:7118126 Cmu08g1563 Cmu-Chr8:27421620 3.80E-78 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0698 K06627 - csv:101213896 619.002