Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cmu02g0705 ATGATGTTGAGGTCGTGTTGCCGGCCGCTCGAGCGGTTCATTGGCCGGTGGAGCGGCGATGGACTACTCTGGCAGTCGGAATTGAAGCCTCATGCCTCTGGTGATTACTCAATCGCTGTTGTTCAGGCTAATTCTTGTCTTGAGGATCAGAGTCAGGTCTTCACGTCTCCTTCTGCTACTTATGTTGGTGTTTATGATGGCCATGGCGGTCCGGAGGCTTCTCGCTTCGTGAATAAGCATCTTTTTCCTTATATGCATAAGTTTGCTTCAGAACAAGGTGGACTATCGGAGGATGTTATTAAGAAGGCATTCAATGCTACAGAAGAGGAGTTTACGCGTTTGGTTAAGCGGGCTTTGCCTGCAAAGCCACAGATTGCTTCAGTTGGATCATGCTGTCTTGTAGGTGCAATTTCAAATACAAAGTTATACATTGCGAATCTCGGTGATTCGAGAGCTGTGCTTGGTCGTAGAGGTTCAGAGAGTAAGATAACACCAGTAGTTGCAGAACGGTTGTCCACCGATCACAATGTTGGAGTAGATGAAGTTAGGAAAGAGGTTGTAGCACTTCATCCTGATGATTCCCATATAGTTGTCTATACTCGTGGAGTTTGGAGGATAAAAGGCATAATTCAGGTTTCAAGATCTATTGGCGATGTATATTTAAAGAAACCCGAGTTCAACCGGGATCCAATATTCCAACAATTTGGGAACCCCGTTCCTTTGAAACGACCAGTAATGACTGCAGAACCATCGATCCTGACACGAGAGCTCAAACCCCAAGATTTATTCCTCATCTTTGCATCAGATGGTCTCTGGGAACAACTGACTGATGAAGCTGCGGTGGAGATAGTTTTCAAGAACCCAAGAGCTGGAATTGCAAAGAGATTAGTGCGTGCTGCCCTCCACGAGGCAGCAAAGAAGCGTGAAATGAGATACTCCGACTTAAAGAAGATCGAAAAGGGGATTCGCCGTCATTTCCACGACGACATCACTGTCATCGTCGTTTATCTCGACCACAATAGAAGCTCACACTCCAATCGAGCAAAGAACACAGTTGCCGGGTACACTAGTGCACCTGTTGACATTTTCTCTCTTAAATCAAACAATGAAGAAGAGGAAAAACTTCACACAATGTTGTGA 1140 45.44 MMLRSCCRPLERFIGRWSGDGLLWQSELKPHASGDYSIAVVQANSCLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKHLFPYMHKFASEQGGLSEDVIKKAFNATEEEFTRLVKRALPAKPQIASVGSCCLVGAISNTKLYIANLGDSRAVLGRRGSESKITPVVAERLSTDHNVGVDEVRKEVVALHPDDSHIVVYTRGVWRIKGIIQVSRSIGDVYLKKPEFNRDPIFQQFGNPVPLKRPVMTAEPSILTRELKPQDLFLIFASDGLWEQLTDEAAVEIVFKNPRAGIAKRLVRAALHEAAKKREMRYSDLKKIEKGIRRHFHDDITVIVVYLDHNRSSHSNRAKNTVAGYTSAPVDIFSLKSNNEEEEKLHTML 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 7231205 7233303 - CmPI595203_02g007050.1 Cmu02g0705 408754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cmu02g0705 379 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169(InterPro)
Cmu02g0705 379 PANTHER PROTEIN PHOSPHATASE 29 336 IPR015655 GO:0004722(PANTHER)|GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cmu02g0705 379 ProSiteProfiles PPM-type phosphatase domain profile. 35 337 IPR001932 -
Cmu02g0705 379 SUPERFAMILY PP2C-like 43 338 IPR036457 -
Cmu02g0705 379 Gene3D - 25 349 IPR036457 -
Cmu02g0705 379 CDD PP2Cc 42 337 IPR001932 -
Cmu02g0705 379 FunFam Probable protein phosphatase 2C 42 26 345 - -
Cmu02g0705 379 SMART PP2C_4 25 335 IPR001932 -
Cmu02g0705 379 Pfam Protein phosphatase 2C 56 306 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cmu02g0705 Cmu-Chr2:7231205 Cmu10g2488 Cmu-Chr10:31532324 1.10E-117 dispersed
Cmu02g0705 Cmu-Chr2:7231205 Cmu02g1208 Cmu-Chr2:24863102 1.50E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cmu02g0705 - - - 0.0